RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 CDCA5Q96FF9 252 aa20.2■□□□□ 0.82
DNMT1-229ENST00000593049 MKRN1Q9UHC7 482 aaKnown RBP20.2■□□□□ 0.82
DNMT1-229ENST00000593049 LDHBP07195 334 aaKnown RBP20.19■□□□□ 0.82
DNMT1-229ENST00000593049 NF2P35240 595 aa20.19■□□□□ 0.82
DNMT1-229ENST00000593049 CCDC158Q5M9N0 1113 aa20.19■□□□□ 0.82
DNMT1-229ENST00000593049 SPTY2D1Q68D10 685 aaPredicted RBP20.19■□□□□ 0.82
DNMT1-229ENST00000593049 PRMT6Q96LA8 375 aaPredicted RBP20.19■□□□□ 0.82
DNMT1-229ENST00000593049 GBA2Q9HCG7 927 aaPredicted RBP20.19■□□□□ 0.82
DNMT1-229ENST00000593049 EXOC6BQ9Y2D4 811 aa20.19■□□□□ 0.82
DNMT1-229ENST00000593049 PPP2R3BQ9Y5P8 575 aa20.19■□□□□ 0.82
DNMT1-229ENST00000593049 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.19■□□□□ 0.82
DNMT1-229ENST00000593049 ARID4AP29374 1257 aaPredicted RBP20.18■□□□□ 0.82
DNMT1-229ENST00000593049 ECE1P42892 770 aa20.18■□□□□ 0.82
DNMT1-229ENST00000593049 FKBP1BP68106 108 aa20.18■□□□□ 0.82
DNMT1-229ENST00000593049 TNFAIP1Q13829 316 aa20.18■□□□□ 0.82
DNMT1-229ENST00000593049 RASGRF1Q13972 1273 aa20.18■□□□□ 0.82
DNMT1-229ENST00000593049 HHIPL2Q6UWX4 724 aa20.18■□□□□ 0.82
DNMT1-229ENST00000593049 SAPCD2Q86UD0 394 aa20.18■□□□□ 0.82
DNMT1-229ENST00000593049 ZDHHC15Q96MV8 337 aa20.18■□□□□ 0.82
DNMT1-229ENST00000593049 RAB11FIP3O75154 756 aa20.17■□□□□ 0.82
DNMT1-229ENST00000593049 GRIK5Q16478 980 aa20.17■□□□□ 0.82
DNMT1-229ENST00000593049 SIRT2Q8IXJ6 389 aa20.17■□□□□ 0.82
DNMT1-229ENST00000593049 KIF1BPQ96EK5 621 aa20.17■□□□□ 0.82
DNMT1-229ENST00000593049 SPDYE2Q495Y8 402 aa20.16■□□□□ 0.82
DNMT1-229ENST00000593049 TTC39AQ5SRH9 613 aa20.16■□□□□ 0.82
DNMT1-229ENST00000593049 SLF2Q8IX21 1173 aa20.16■□□□□ 0.82
DNMT1-229ENST00000593049 DEFB129Q9H1M3 183 aa20.16■□□□□ 0.82
DNMT1-229ENST00000593049 VEZTQ9HBM0 779 aa20.16■□□□□ 0.82
DNMT1-229ENST00000593049 ZNF70Q9UC06 446 aaPredicted RBP20.16■□□□□ 0.82
DNMT1-229ENST00000593049 CLRN2A0PK11 232 aa20.15■□□□□ 0.82
DNMT1-229ENST00000593049 DLK2Q6UY11 383 aa20.15■□□□□ 0.82
DNMT1-229ENST00000593049 SPATA5Q8NB90 893 aa20.15■□□□□ 0.82
DNMT1-229ENST00000593049 RHPN1Q8TCX5 695 aa20.15■□□□□ 0.82
DNMT1-229ENST00000593049 ZNF512BQ96KM6 892 aaPredicted RBP20.15■□□□□ 0.82
DNMT1-229ENST00000593049 DBNDD2Q9BQY9 259 aa20.15■□□□□ 0.82
DNMT1-229ENST00000593049 TMOD2Q9NZR1 351 aa20.15■□□□□ 0.82
DNMT1-229ENST00000593049 PCDHAC2Q9Y5I4 1007 aa20.15■□□□□ 0.82
DNMT1-229ENST00000593049 PAPPA2Q9BXP8 1791 aa20.15■□□□□ 0.82
DNMT1-229ENST00000593049 PRDX5P30044 214 aa20.14■□□□□ 0.81
DNMT1-229ENST00000593049 TNNI2P48788 182 aa20.14■□□□□ 0.81
DNMT1-229ENST00000593049 VEGFBP49765 207 aa20.14■□□□□ 0.81
DNMT1-229ENST00000593049 HUNKP57058 714 aa20.14■□□□□ 0.81
DNMT1-229ENST00000593049 PAXIP1Q6ZW49 1069 aaPredicted RBP20.14■□□□□ 0.81
DNMT1-229ENST00000593049 DZIP1Q86YF9 867 aaKnown RBP20.14■□□□□ 0.81
DNMT1-229ENST00000593049 CLASRPQ8N2M8 674 aaKnown RBP20.14■□□□□ 0.81
DNMT1-229ENST00000593049 TDRD3Q9H7E2 651 aaKnown RBP20.14■□□□□ 0.81
DNMT1-229ENST00000593049 HMG20BQ9P0W2 317 aa20.14■□□□□ 0.81
DNMT1-229ENST00000593049 ABCF2Q9UG63 623 aa20.14■□□□□ 0.81
DNMT1-229ENST00000593049 WDR33Q9C0J8 1336 aaKnown RBP20.13■□□□□ 0.81
DNMT1-229ENST00000593049 IGSF3O75054 1194 aa20.13■□□□□ 0.81
DNMT1-229ENST00000593049 SUPT20HL1Q3ZLR7 823 aa20.13■□□□□ 0.81
DNMT1-229ENST00000593049 ERICH6Q7L0X2 663 aa20.13■□□□□ 0.81
DNMT1-229ENST00000593049 EAF2Q96CJ1 260 aaPredicted RBP20.13■□□□□ 0.81
DNMT1-229ENST00000593049 CAPNS2Q96L46 248 aa20.13■□□□□ 0.81
DNMT1-229ENST00000593049 SCAF8Q9UPN6 1271 aaKnown RBP20.13■□□□□ 0.81
DNMT1-229ENST00000593049 MCAMP43121 646 aa20.12■□□□□ 0.81
DNMT1-229ENST00000593049 AAMPQ13685 434 aa20.12■□□□□ 0.81
DNMT1-229ENST00000593049 FKBP1CQ5VVH2 108 aa20.12■□□□□ 0.81
DNMT1-229ENST00000593049 AACSQ86V21 672 aa20.12■□□□□ 0.81
DNMT1-229ENST00000593049 CCDC8Q9H0W5 538 aaPredicted RBP20.12■□□□□ 0.81
DNMT1-229ENST00000593049 DBNLQ9UJU6 430 aaKnown RBP20.12■□□□□ 0.81
DNMT1-229ENST00000593049 RASA3Q14644 834 aa20.11■□□□□ 0.81
DNMT1-229ENST00000593049 APOBEC3HQ6NTF7 200 aaKnown RBP20.11■□□□□ 0.81
DNMT1-229ENST00000593049 ARMC9Q7Z3E5 817 aa20.11■□□□□ 0.81
DNMT1-229ENST00000593049 DAGLAQ9Y4D2 1042 aa20.11■□□□□ 0.81
DNMT1-229ENST00000593049 MYH2Q9UKX2 1941 aa20.1■□□□□ 0.81
DNMT1-229ENST00000593049 GSTO1P78417 241 aa20.1■□□□□ 0.81
DNMT1-229ENST00000593049 PRAMEF18Q5VWM3 479 aa20.1■□□□□ 0.81
DNMT1-229ENST00000593049 CYP4F22Q6NT55 531 aa20.1■□□□□ 0.81
DNMT1-229ENST00000593049 RGMBQ6NW40 437 aa20.1■□□□□ 0.81
DNMT1-229ENST00000593049 FAM163AQ96GL9 167 aaPredicted RBP20.1■□□□□ 0.81
DNMT1-229ENST00000593049 IL1RAPL2Q9NP60 686 aa20.1■□□□□ 0.81
DNMT1-229ENST00000593049 AOX1Q06278 1338 aa20.09■□□□□ 0.81
DNMT1-229ENST00000593049 APBB1O00213 710 aa20.09■□□□□ 0.81
DNMT1-229ENST00000593049 LDHCP07864 332 aa20.09■□□□□ 0.81
DNMT1-229ENST00000593049 IFIT2P09913 472 aaKnown RBP20.09■□□□□ 0.81
DNMT1-229ENST00000593049 MAP2K2P36507 400 aa20.09■□□□□ 0.81
DNMT1-229ENST00000593049 TTLL12Q14166 644 aaPredicted RBP20.09■□□□□ 0.81
DNMT1-229ENST00000593049 DIXDC1Q155Q3 683 aa20.09■□□□□ 0.81
DNMT1-229ENST00000593049 FAM83AQ86UY5 434 aa20.09■□□□□ 0.81
DNMT1-229ENST00000593049 CCDC102AQ96A19 550 aa20.09■□□□□ 0.81
DNMT1-229ENST00000593049 AKAP11Q9UKA4 1901 aa20.09■□□□□ 0.81
DNMT1-229ENST00000593049 GAKO14976 1311 aa20.08■□□□□ 0.81
DNMT1-229ENST00000593049 TCP10L2B9ZVM9 353 aa20.08■□□□□ 0.81
DNMT1-229ENST00000593049 PPP1R12BO60237 982 aaPredicted RBP20.08■□□□□ 0.81
DNMT1-229ENST00000593049 PI16Q6UXB8 463 aa20.08■□□□□ 0.81
DNMT1-229ENST00000593049 CRBNQ96SW2 442 aa20.08■□□□□ 0.81
DNMT1-229ENST00000593049 LRRCC1Q9C099 1032 aa20.08■□□□□ 0.81
DNMT1-229ENST00000593049 TLR7Q9NYK1 1049 aaKnown RBP20.08■□□□□ 0.81
DNMT1-229ENST00000593049 LRP2BPQ9P2M1 347 aa20.08■□□□□ 0.81
DNMT1-229ENST00000593049 THSD7BQ9C0I4 1608 aa20.08■□□□□ 0.8
DNMT1-229ENST00000593049 UNCXA6NJT0 531 aa20.07■□□□□ 0.8
DNMT1-229ENST00000593049 MAP4K4O95819 1239 aaPredicted RBP20.07■□□□□ 0.8
DNMT1-229ENST00000593049 ZNF157P51786 506 aaPredicted RBP20.07■□□□□ 0.8
DNMT1-229ENST00000593049 MECOMQ03112 1051 aa20.07■□□□□ 0.8
DNMT1-229ENST00000593049 NOGQ13253 232 aa20.07■□□□□ 0.8
DNMT1-229ENST00000593049 HOOK2Q96ED9 719 aa20.07■□□□□ 0.8
DNMT1-229ENST00000593049 DCTPP1Q9H773 170 aa20.07■□□□□ 0.8
DNMT1-229ENST00000593049 RAI14Q9P0K7 980 aa20.07■□□□□ 0.8
DNMT1-229ENST00000593049 MROH7-TTC4A0A0A0MT08 1334 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms