RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 CDCA5Q96FF9 252 aa20.2■□□□□ 0.82
DNMT1-221ENST00000589538 MKRN1Q9UHC7 482 aaKnown RBP20.2■□□□□ 0.82
DNMT1-221ENST00000589538 LDHBP07195 334 aaKnown RBP20.19■□□□□ 0.82
DNMT1-221ENST00000589538 NF2P35240 595 aa20.19■□□□□ 0.82
DNMT1-221ENST00000589538 CCDC158Q5M9N0 1113 aa20.19■□□□□ 0.82
DNMT1-221ENST00000589538 SPTY2D1Q68D10 685 aaPredicted RBP20.19■□□□□ 0.82
DNMT1-221ENST00000589538 PRMT6Q96LA8 375 aaPredicted RBP20.19■□□□□ 0.82
DNMT1-221ENST00000589538 GBA2Q9HCG7 927 aaPredicted RBP20.19■□□□□ 0.82
DNMT1-221ENST00000589538 EXOC6BQ9Y2D4 811 aa20.19■□□□□ 0.82
DNMT1-221ENST00000589538 PPP2R3BQ9Y5P8 575 aa20.19■□□□□ 0.82
DNMT1-221ENST00000589538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.19■□□□□ 0.82
DNMT1-221ENST00000589538 ARID4AP29374 1257 aaPredicted RBP20.18■□□□□ 0.82
DNMT1-221ENST00000589538 ECE1P42892 770 aa20.18■□□□□ 0.82
DNMT1-221ENST00000589538 FKBP1BP68106 108 aa20.18■□□□□ 0.82
DNMT1-221ENST00000589538 TNFAIP1Q13829 316 aa20.18■□□□□ 0.82
DNMT1-221ENST00000589538 RASGRF1Q13972 1273 aa20.18■□□□□ 0.82
DNMT1-221ENST00000589538 HHIPL2Q6UWX4 724 aa20.18■□□□□ 0.82
DNMT1-221ENST00000589538 SAPCD2Q86UD0 394 aa20.18■□□□□ 0.82
DNMT1-221ENST00000589538 ZDHHC15Q96MV8 337 aa20.18■□□□□ 0.82
DNMT1-221ENST00000589538 RAB11FIP3O75154 756 aa20.17■□□□□ 0.82
DNMT1-221ENST00000589538 GRIK5Q16478 980 aa20.17■□□□□ 0.82
DNMT1-221ENST00000589538 SIRT2Q8IXJ6 389 aa20.17■□□□□ 0.82
DNMT1-221ENST00000589538 KIF1BPQ96EK5 621 aa20.17■□□□□ 0.82
DNMT1-221ENST00000589538 SPDYE2Q495Y8 402 aa20.16■□□□□ 0.82
DNMT1-221ENST00000589538 TTC39AQ5SRH9 613 aa20.16■□□□□ 0.82
DNMT1-221ENST00000589538 SLF2Q8IX21 1173 aa20.16■□□□□ 0.82
DNMT1-221ENST00000589538 DEFB129Q9H1M3 183 aa20.16■□□□□ 0.82
DNMT1-221ENST00000589538 VEZTQ9HBM0 779 aa20.16■□□□□ 0.82
DNMT1-221ENST00000589538 ZNF70Q9UC06 446 aaPredicted RBP20.16■□□□□ 0.82
DNMT1-221ENST00000589538 CLRN2A0PK11 232 aa20.15■□□□□ 0.82
DNMT1-221ENST00000589538 DLK2Q6UY11 383 aa20.15■□□□□ 0.82
DNMT1-221ENST00000589538 SPATA5Q8NB90 893 aa20.15■□□□□ 0.82
DNMT1-221ENST00000589538 RHPN1Q8TCX5 695 aa20.15■□□□□ 0.82
DNMT1-221ENST00000589538 ZNF512BQ96KM6 892 aaPredicted RBP20.15■□□□□ 0.82
DNMT1-221ENST00000589538 DBNDD2Q9BQY9 259 aa20.15■□□□□ 0.82
DNMT1-221ENST00000589538 TMOD2Q9NZR1 351 aa20.15■□□□□ 0.82
DNMT1-221ENST00000589538 PCDHAC2Q9Y5I4 1007 aa20.15■□□□□ 0.82
DNMT1-221ENST00000589538 PAPPA2Q9BXP8 1791 aa20.15■□□□□ 0.82
DNMT1-221ENST00000589538 PRDX5P30044 214 aa20.14■□□□□ 0.81
DNMT1-221ENST00000589538 TNNI2P48788 182 aa20.14■□□□□ 0.81
DNMT1-221ENST00000589538 VEGFBP49765 207 aa20.14■□□□□ 0.81
DNMT1-221ENST00000589538 HUNKP57058 714 aa20.14■□□□□ 0.81
DNMT1-221ENST00000589538 PAXIP1Q6ZW49 1069 aaPredicted RBP20.14■□□□□ 0.81
DNMT1-221ENST00000589538 DZIP1Q86YF9 867 aaKnown RBP20.14■□□□□ 0.81
DNMT1-221ENST00000589538 CLASRPQ8N2M8 674 aaKnown RBP20.14■□□□□ 0.81
DNMT1-221ENST00000589538 TDRD3Q9H7E2 651 aaKnown RBP20.14■□□□□ 0.81
DNMT1-221ENST00000589538 HMG20BQ9P0W2 317 aa20.14■□□□□ 0.81
DNMT1-221ENST00000589538 ABCF2Q9UG63 623 aa20.14■□□□□ 0.81
DNMT1-221ENST00000589538 WDR33Q9C0J8 1336 aaKnown RBP20.13■□□□□ 0.81
DNMT1-221ENST00000589538 IGSF3O75054 1194 aa20.13■□□□□ 0.81
DNMT1-221ENST00000589538 SUPT20HL1Q3ZLR7 823 aa20.13■□□□□ 0.81
DNMT1-221ENST00000589538 ERICH6Q7L0X2 663 aa20.13■□□□□ 0.81
DNMT1-221ENST00000589538 EAF2Q96CJ1 260 aaPredicted RBP20.13■□□□□ 0.81
DNMT1-221ENST00000589538 CAPNS2Q96L46 248 aa20.13■□□□□ 0.81
DNMT1-221ENST00000589538 SCAF8Q9UPN6 1271 aaKnown RBP20.13■□□□□ 0.81
DNMT1-221ENST00000589538 MCAMP43121 646 aa20.12■□□□□ 0.81
DNMT1-221ENST00000589538 AAMPQ13685 434 aa20.12■□□□□ 0.81
DNMT1-221ENST00000589538 FKBP1CQ5VVH2 108 aa20.12■□□□□ 0.81
DNMT1-221ENST00000589538 AACSQ86V21 672 aa20.12■□□□□ 0.81
DNMT1-221ENST00000589538 CCDC8Q9H0W5 538 aaPredicted RBP20.12■□□□□ 0.81
DNMT1-221ENST00000589538 DBNLQ9UJU6 430 aaKnown RBP20.12■□□□□ 0.81
DNMT1-221ENST00000589538 RASA3Q14644 834 aa20.11■□□□□ 0.81
DNMT1-221ENST00000589538 APOBEC3HQ6NTF7 200 aaKnown RBP20.11■□□□□ 0.81
DNMT1-221ENST00000589538 ARMC9Q7Z3E5 817 aa20.11■□□□□ 0.81
DNMT1-221ENST00000589538 DAGLAQ9Y4D2 1042 aa20.11■□□□□ 0.81
DNMT1-221ENST00000589538 MYH2Q9UKX2 1941 aa20.1■□□□□ 0.81
DNMT1-221ENST00000589538 GSTO1P78417 241 aa20.1■□□□□ 0.81
DNMT1-221ENST00000589538 PRAMEF18Q5VWM3 479 aa20.1■□□□□ 0.81
DNMT1-221ENST00000589538 CYP4F22Q6NT55 531 aa20.1■□□□□ 0.81
DNMT1-221ENST00000589538 RGMBQ6NW40 437 aa20.1■□□□□ 0.81
DNMT1-221ENST00000589538 FAM163AQ96GL9 167 aaPredicted RBP20.1■□□□□ 0.81
DNMT1-221ENST00000589538 IL1RAPL2Q9NP60 686 aa20.1■□□□□ 0.81
DNMT1-221ENST00000589538 AOX1Q06278 1338 aa20.09■□□□□ 0.81
DNMT1-221ENST00000589538 APBB1O00213 710 aa20.09■□□□□ 0.81
DNMT1-221ENST00000589538 LDHCP07864 332 aa20.09■□□□□ 0.81
DNMT1-221ENST00000589538 IFIT2P09913 472 aaKnown RBP20.09■□□□□ 0.81
DNMT1-221ENST00000589538 MAP2K2P36507 400 aa20.09■□□□□ 0.81
DNMT1-221ENST00000589538 TTLL12Q14166 644 aaPredicted RBP20.09■□□□□ 0.81
DNMT1-221ENST00000589538 DIXDC1Q155Q3 683 aa20.09■□□□□ 0.81
DNMT1-221ENST00000589538 FAM83AQ86UY5 434 aa20.09■□□□□ 0.81
DNMT1-221ENST00000589538 CCDC102AQ96A19 550 aa20.09■□□□□ 0.81
DNMT1-221ENST00000589538 AKAP11Q9UKA4 1901 aa20.09■□□□□ 0.81
DNMT1-221ENST00000589538 GAKO14976 1311 aa20.08■□□□□ 0.81
DNMT1-221ENST00000589538 TCP10L2B9ZVM9 353 aa20.08■□□□□ 0.81
DNMT1-221ENST00000589538 PPP1R12BO60237 982 aaPredicted RBP20.08■□□□□ 0.81
DNMT1-221ENST00000589538 PI16Q6UXB8 463 aa20.08■□□□□ 0.81
DNMT1-221ENST00000589538 CRBNQ96SW2 442 aa20.08■□□□□ 0.81
DNMT1-221ENST00000589538 LRRCC1Q9C099 1032 aa20.08■□□□□ 0.81
DNMT1-221ENST00000589538 TLR7Q9NYK1 1049 aaKnown RBP20.08■□□□□ 0.81
DNMT1-221ENST00000589538 LRP2BPQ9P2M1 347 aa20.08■□□□□ 0.81
DNMT1-221ENST00000589538 THSD7BQ9C0I4 1608 aa20.08■□□□□ 0.8
DNMT1-221ENST00000589538 UNCXA6NJT0 531 aa20.07■□□□□ 0.8
DNMT1-221ENST00000589538 MAP4K4O95819 1239 aaPredicted RBP20.07■□□□□ 0.8
DNMT1-221ENST00000589538 ZNF157P51786 506 aaPredicted RBP20.07■□□□□ 0.8
DNMT1-221ENST00000589538 MECOMQ03112 1051 aa20.07■□□□□ 0.8
DNMT1-221ENST00000589538 NOGQ13253 232 aa20.07■□□□□ 0.8
DNMT1-221ENST00000589538 HOOK2Q96ED9 719 aa20.07■□□□□ 0.8
DNMT1-221ENST00000589538 DCTPP1Q9H773 170 aa20.07■□□□□ 0.8
DNMT1-221ENST00000589538 RAI14Q9P0K7 980 aa20.07■□□□□ 0.8
DNMT1-221ENST00000589538 MROH7-TTC4A0A0A0MT08 1334 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms