RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TPM4P67936 248 aa20.24■□□□□ 0.83
SCARF1-205ENST00000571272 GABPB1Q06547 395 aaPredicted RBP20.24■□□□□ 0.83
SCARF1-205ENST00000571272 PTPN21Q16825 1174 aa20.24■□□□□ 0.83
SCARF1-205ENST00000571272 RALYLQ86SE5 291 aaKnown RBP20.24■□□□□ 0.83
SCARF1-205ENST00000571272 MB21D2Q8IYB1 491 aaPredicted RBP20.24■□□□□ 0.83
SCARF1-205ENST00000571272 DENND2AQ9ULE3 1009 aa20.24■□□□□ 0.83
SCARF1-205ENST00000571272 MROH7-TTC4A0A0A0MT08 1334 aa20.24■□□□□ 0.83
SCARF1-205ENST00000571272 RXRAP19793 462 aa20.24■□□□□ 0.83
SCARF1-205ENST00000571272 FANCCQ00597 558 aa20.24■□□□□ 0.83
SCARF1-205ENST00000571272 KIF23Q02241 960 aaPredicted RBP20.24■□□□□ 0.83
SCARF1-205ENST00000571272 CCDC158Q5M9N0 1113 aa20.24■□□□□ 0.83
SCARF1-205ENST00000571272 BRAPQ7Z569 592 aa20.24■□□□□ 0.83
SCARF1-205ENST00000571272 SLFN14P0C7P3 912 aa20.23■□□□□ 0.83
SCARF1-205ENST00000571272 HOMER1Q86YM7 354 aa20.23■□□□□ 0.83
SCARF1-205ENST00000571272 XAGE2Q96GT9 111 aa20.23■□□□□ 0.83
SCARF1-205ENST00000571272 FBXL16Q8N461 479 aa20.23■□□□□ 0.83
SCARF1-205ENST00000571272 NCOA7Q8NI08 942 aa20.23■□□□□ 0.83
SCARF1-205ENST00000571272 ZAP70P43403 619 aa20.22■□□□□ 0.83
SCARF1-205ENST00000571272 ST7Q9NRC1 585 aa20.22■□□□□ 0.83
SCARF1-205ENST00000571272 ZNF330Q9Y3S2 320 aaPredicted RBP20.22■□□□□ 0.83
SCARF1-205ENST00000571272 CMA1P23946 247 aa20.22■□□□□ 0.83
SCARF1-205ENST00000571272 PROSER2Q86WR7 435 aaPredicted RBP20.22■□□□□ 0.83
SCARF1-205ENST00000571272 ZNF446Q9NWS9 450 aa20.22■□□□□ 0.83
SCARF1-205ENST00000571272 ZNF213O14771 459 aa20.21■□□□□ 0.83
SCARF1-205ENST00000571272 DPF2Q92785 391 aa20.21■□□□□ 0.83
SCARF1-205ENST00000571272 PSDA5PKW4 1024 aaPredicted RBP20.21■□□□□ 0.83
SCARF1-205ENST00000571272 SYKP43405 635 aa20.21■□□□□ 0.83
SCARF1-205ENST00000571272 GOLGA8FQ08AF8 430 aa20.21■□□□□ 0.83
SCARF1-205ENST00000571272 GOLGA8DPQ0D2H9 430 aa20.21■□□□□ 0.83
SCARF1-205ENST00000571272 CCDC57Q2TAC2 916 aa20.21■□□□□ 0.83
SCARF1-205ENST00000571272 L2HGDHQ9H9P8 463 aa20.21■□□□□ 0.83
SCARF1-205ENST00000571272 NRDCO43847 1150 aa20.2■□□□□ 0.83
SCARF1-205ENST00000571272 NKX2-3Q8TAU0 364 aa20.2■□□□□ 0.83
SCARF1-205ENST00000571272 HSD3B7Q9H2F3 369 aa20.2■□□□□ 0.83
SCARF1-205ENST00000571272 CCDC191Q8NCU4 936 aa20.2■□□□□ 0.82
SCARF1-205ENST00000571272 GPAA1O43292 621 aa20.2■□□□□ 0.82
SCARF1-205ENST00000571272 CIAO1O76071 339 aa20.2■□□□□ 0.82
SCARF1-205ENST00000571272 SERPINC1P01008 464 aa20.2■□□□□ 0.82
SCARF1-205ENST00000571272 PNOCQ13519 176 aa20.2■□□□□ 0.82
SCARF1-205ENST00000571272 SLC39A14Q15043 492 aa20.2■□□□□ 0.82
SCARF1-205ENST00000571272 TERF2Q15554 542 aa20.2■□□□□ 0.82
SCARF1-205ENST00000571272 LRRFIP1Q32MZ4 808 aaKnown RBP20.2■□□□□ 0.82
SCARF1-205ENST00000571272 DNAI1Q9UI46 699 aa20.2■□□□□ 0.82
SCARF1-205ENST00000571272 UBASH3AP57075 661 aa20.19■□□□□ 0.82
SCARF1-205ENST00000571272 ALG1Q9BT22 464 aa20.19■□□□□ 0.82
SCARF1-205ENST00000571272 GNL2Q13823 731 aaKnown RBP20.19■□□□□ 0.82
SCARF1-205ENST00000571272 TICAM2Q86XR7 235 aa20.19■□□□□ 0.82
SCARF1-205ENST00000571272 APPBP2Q92624 585 aa20.19■□□□□ 0.82
SCARF1-205ENST00000571272 PHKBQ93100 1093 aa20.19■□□□□ 0.82
SCARF1-205ENST00000571272 CLIC6Q96NY7 704 aa20.19■□□□□ 0.82
SCARF1-205ENST00000571272 CFAP100Q494V2 611 aa20.18■□□□□ 0.82
SCARF1-205ENST00000571272 VPS37DQ86XT2 251 aa20.18■□□□□ 0.82
SCARF1-205ENST00000571272 TRPM3Q9HCF6 1732 aaPredicted RBP20.18■□□□□ 0.82
SCARF1-205ENST00000571272 NWD2Q9ULI1 1742 aa20.18■□□□□ 0.82
SCARF1-205ENST00000571272 ZFYP08048 801 aaPredicted RBP20.18■□□□□ 0.82
SCARF1-205ENST00000571272 CCDC93Q567U6 631 aa20.18■□□□□ 0.82
SCARF1-205ENST00000571272 HSP90AA4PQ58FG1 418 aa20.18■□□□□ 0.82
SCARF1-205ENST00000571272 SHC4Q6S5L8 630 aa20.18■□□□□ 0.82
SCARF1-205ENST00000571272 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.18■□□□□ 0.82
SCARF1-205ENST00000571272 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.18■□□□□ 0.82
SCARF1-205ENST00000571272 ARHGAP29Q52LW3 1261 aa20.17■□□□□ 0.82
SCARF1-205ENST00000571272 TAF7LQ5H9L4 462 aa20.17■□□□□ 0.82
SCARF1-205ENST00000571272 UTP14AQ9BVJ6 771 aaKnown RBP20.17■□□□□ 0.82
SCARF1-205ENST00000571272 IKBKBO14920 756 aa20.17■□□□□ 0.82
SCARF1-205ENST00000571272 ETF1P62495 437 aaKnown RBP20.17■□□□□ 0.82
SCARF1-205ENST00000571272 KRT40Q6A162 431 aa20.17■□□□□ 0.82
SCARF1-205ENST00000571272 SENP2Q9HC62 589 aa20.17■□□□□ 0.82
SCARF1-205ENST00000571272 C1orf167Q5SNV9 1468 aa20.16■□□□□ 0.82
SCARF1-205ENST00000571272 APPP05067 770 aa20.16■□□□□ 0.82
SCARF1-205ENST00000571272 METAP2P50579 478 aaKnown RBP eCLIP20.16■□□□□ 0.82
SCARF1-205ENST00000571272 TRDNQ13061 729 aa20.16■□□□□ 0.82
SCARF1-205ENST00000571272 MICU3Q86XE3 530 aa20.16■□□□□ 0.82
SCARF1-205ENST00000571272 FAM177A1Q8N128 213 aaPredicted RBP20.16■□□□□ 0.82
SCARF1-205ENST00000571272 FAM89AQ96GI7 184 aa20.16■□□□□ 0.82
SCARF1-205ENST00000571272 ATG3Q9NT62 314 aa20.16■□□□□ 0.82
SCARF1-205ENST00000571272 FAM53CQ9NYF3 392 aa20.16■□□□□ 0.82
SCARF1-205ENST00000571272 TMEM232C9JQI7 657 aa20.16■□□□□ 0.82
SCARF1-205ENST00000571272 H2AFXP16104 143 aaPredicted RBP20.16■□□□□ 0.82
SCARF1-205ENST00000571272 CYB5R4Q7L1T6 521 aa20.16■□□□□ 0.82
SCARF1-205ENST00000571272 NBPF3Q9H094 633 aa20.16■□□□□ 0.82
SCARF1-205ENST00000571272 AKAP2Q9Y2D5 859 aa20.16■□□□□ 0.82
SCARF1-205ENST00000571272 UBE2Q2LH0YL09 131 aa20.15■□□□□ 0.82
SCARF1-205ENST00000571272 CLCN6P51797 869 aa20.15■□□□□ 0.82
SCARF1-205ENST00000571272 MYL5Q02045 173 aa20.15■□□□□ 0.82
SCARF1-205ENST00000571272 TUBE1Q9UJT0 475 aa20.15■□□□□ 0.82
SCARF1-205ENST00000571272 CDC27P30260 824 aa20.15■□□□□ 0.82
SCARF1-205ENST00000571272 TBC1D10CQ8IV04 446 aa20.15■□□□□ 0.82
SCARF1-205ENST00000571272 ANGEL1Q9UNK9 670 aaKnown RBP20.15■□□□□ 0.82
SCARF1-205ENST00000571272 KCNJ6P48051 423 aa20.14■□□□□ 0.82
SCARF1-205ENST00000571272 SPECC1Q5M775 1068 aa20.14■□□□□ 0.82
SCARF1-205ENST00000571272 MYL10Q9BUA6 226 aa20.14■□□□□ 0.82
SCARF1-205ENST00000571272 FANCLQ9NW38 375 aa20.14■□□□□ 0.82
SCARF1-205ENST00000571272 FANCGO15287 622 aa20.14■□□□□ 0.81
SCARF1-205ENST00000571272 LONRF3Q496Y0 759 aa20.14■□□□□ 0.81
SCARF1-205ENST00000571272 HPSEQ9Y251 543 aa20.14■□□□□ 0.81
SCARF1-205ENST00000571272 URI1O94763 535 aaPredicted RBP20.13■□□□□ 0.81
SCARF1-205ENST00000571272 PTPAQ15257 358 aa20.13■□□□□ 0.81
SCARF1-205ENST00000571272 TIGD1Q96MW7 591 aa20.13■□□□□ 0.81
SCARF1-205ENST00000571272 ZMYM6O95789 1325 aa20.13■□□□□ 0.81
SCARF1-205ENST00000571272 TMEM94Q12767 1356 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms