RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 VEZTQ9HBM0 779 aa15.7■□□□□ 0.1
CDT1-203ENST00000569140 SNRKQ9NRH2 765 aa15.7■□□□□ 0.1
CDT1-203ENST00000569140 CLRN2A0PK11 232 aa15.69■□□□□ 0.1
CDT1-203ENST00000569140 ITGBL1O95965 494 aaPredicted RBP15.69■□□□□ 0.1
CDT1-203ENST00000569140 ARID4AP29374 1257 aaPredicted RBP15.69■□□□□ 0.1
CDT1-203ENST00000569140 PRDX5P30044 214 aa15.69■□□□□ 0.1
CDT1-203ENST00000569140 MCAMP43121 646 aa15.69■□□□□ 0.1
CDT1-203ENST00000569140 TEKT1Q969V4 418 aa15.69■□□□□ 0.1
CDT1-203ENST00000569140 HMG20BQ9P0W2 317 aa15.69■□□□□ 0.1
CDT1-203ENST00000569140 ZBTB47Q9UFB7 747 aaPredicted RBP15.69■□□□□ 0.1
CDT1-203ENST00000569140 PGAP2Q9UHJ9 254 aa15.69■□□□□ 0.1
CDT1-203ENST00000569140 PASKQ96RG2 1323 aa15.68■□□□□ 0.1
CDT1-203ENST00000569140 SPDYE2BA6NHP3 402 aa15.68■□□□□ 0.1
CDT1-203ENST00000569140 CELF2O95319 508 aaKnown RBP15.68■□□□□ 0.1
CDT1-203ENST00000569140 SPDYE6P0CI01 402 aa15.68■□□□□ 0.1
CDT1-203ENST00000569140 SPTY2D1Q68D10 685 aaPredicted RBP15.68■□□□□ 0.1
CDT1-203ENST00000569140 DLK2Q6UY11 383 aa15.68■□□□□ 0.1
CDT1-203ENST00000569140 ERICH6Q7L0X2 663 aa15.68■□□□□ 0.1
CDT1-203ENST00000569140 RAI14Q9P0K7 980 aa15.68■□□□□ 0.1
CDT1-203ENST00000569140 SERPINA10Q9UK55 444 aa15.68■□□□□ 0.1
CDT1-203ENST00000569140 ABT1Q9ULW3 272 aaKnown RBP15.68■□□□□ 0.1
CDT1-203ENST00000569140 SUGT1Q9Y2Z0 365 aa15.68■□□□□ 0.1
CDT1-203ENST00000569140 TMEM88BA6NKF7 163 aa15.67■□□□□ 0.1
CDT1-203ENST00000569140 AAMPQ13685 434 aa15.67■□□□□ 0.1
CDT1-203ENST00000569140 TBC1D9Q6ZT07 1266 aa15.67■□□□□ 0.1
CDT1-203ENST00000569140 APOBEC3FQ8IUX4 373 aaKnown RBP15.67■□□□□ 0.1
CDT1-203ENST00000569140 PRMT6Q96LA8 375 aaPredicted RBP15.67■□□□□ 0.1
CDT1-203ENST00000569140 TDRD3Q9H7E2 651 aaKnown RBP15.67■□□□□ 0.1
CDT1-203ENST00000569140 PDS5AQ29RF7 1337 aaKnown RBP15.67■□□□□ 0.1
CDT1-203ENST00000569140 PITPNM2Q9BZ72 1349 aa15.67■□□□□ 0.1
CDT1-203ENST00000569140 SALL1Q9NSC2 1324 aa15.67■□□□□ 0.1
CDT1-203ENST00000569140 DIXDC1Q155Q3 683 aa15.66■□□□□ 0.1
CDT1-203ENST00000569140 DCTPP1Q9H773 170 aa15.66■□□□□ 0.1
CDT1-203ENST00000569140 LRP2BPQ9P2M1 347 aa15.66■□□□□ 0.1
CDT1-203ENST00000569140 ZAP70P43403 619 aa15.65■□□□□ 0.1
CDT1-203ENST00000569140 PRAMEF18Q5VWM3 479 aa15.65■□□□□ 0.1
CDT1-203ENST00000569140 PAXIP1Q6ZW49 1069 aaPredicted RBP15.65■□□□□ 0.1
CDT1-203ENST00000569140 MTMR14Q8NCE2 650 aa15.65■□□□□ 0.1
CDT1-203ENST00000569140 CDCA5Q96FF9 252 aa15.65■□□□□ 0.1
CDT1-203ENST00000569140 CREBZFQ9NS37 354 aa15.65■□□□□ 0.1
CDT1-203ENST00000569140 TMOD2Q9NZR1 351 aa15.65■□□□□ 0.1
CDT1-203ENST00000569140 NDUFB9Q9Y6M9 179 aa15.65■□□□□ 0.1
CDT1-203ENST00000569140 ECM29Q5VYK3 1845 aa15.65■□□□□ 0.1
CDT1-203ENST00000569140 TRPM7Q96QT4 1865 aa15.65■□□□□ 0.1
CDT1-203ENST00000569140 AOX1Q06278 1338 aa15.65■□□□□ 0.1
CDT1-203ENST00000569140 POLR2AP24928 1970 aaKnown RBP15.64■□□□□ 0.09
CDT1-203ENST00000569140 HDLBPQ00341 1268 aaKnown RBP15.64■□□□□ 0.09
CDT1-203ENST00000569140 SLF2Q8IX21 1173 aa15.64■□□□□ 0.09
CDT1-203ENST00000569140 ZBED3Q96IU2 234 aaPredicted RBP15.64■□□□□ 0.09
CDT1-203ENST00000569140 DNAJC2Q99543 621 aaKnown RBP15.64■□□□□ 0.09
CDT1-203ENST00000569140 RWDD1Q9H446 243 aaPredicted RBP15.64■□□□□ 0.09
CDT1-203ENST00000569140 ZNF70Q9UC06 446 aaPredicted RBP15.64■□□□□ 0.09
CDT1-203ENST00000569140 TCP10L2B9ZVM9 353 aa15.63■□□□□ 0.09
CDT1-203ENST00000569140 NF2P35240 595 aa15.63■□□□□ 0.09
CDT1-203ENST00000569140 CACNB3P54284 484 aa15.63■□□□□ 0.09
CDT1-203ENST00000569140 MECOMQ03112 1051 aa15.63■□□□□ 0.09
CDT1-203ENST00000569140 GRM1Q13255 1194 aa15.63■□□□□ 0.09
CDT1-203ENST00000569140 TTLL12Q14166 644 aaPredicted RBP15.63■□□□□ 0.09
CDT1-203ENST00000569140 HHIPL2Q6UWX4 724 aa15.63■□□□□ 0.09
CDT1-203ENST00000569140 GPATCH3Q96I76 525 aa15.63■□□□□ 0.09
CDT1-203ENST00000569140 ZNF512BQ96KM6 892 aaPredicted RBP15.63■□□□□ 0.09
CDT1-203ENST00000569140 ZDHHC15Q96MV8 337 aa15.63■□□□□ 0.09
CDT1-203ENST00000569140 MKRN1Q9UHC7 482 aaKnown RBP15.63■□□□□ 0.09
CDT1-203ENST00000569140 DAGLAQ9Y4D2 1042 aa15.63■□□□□ 0.09
CDT1-203ENST00000569140 IDH1O75874 414 aaKnown RBP15.62■□□□□ 0.09
CDT1-203ENST00000569140 GSTO1P78417 241 aa15.62■□□□□ 0.09
CDT1-203ENST00000569140 HDAC1Q13547 482 aaPredicted RBP15.62■□□□□ 0.09
CDT1-203ENST00000569140 TNFAIP1Q13829 316 aa15.62■□□□□ 0.09
CDT1-203ENST00000569140 SPDYE2Q495Y8 402 aa15.62■□□□□ 0.09
CDT1-203ENST00000569140 ANKRD45Q5TZF3 282 aa15.62■□□□□ 0.09
CDT1-203ENST00000569140 CST9Q5W186 159 aa15.62■□□□□ 0.09
CDT1-203ENST00000569140 GCC1Q96CN9 775 aa15.62■□□□□ 0.09
CDT1-203ENST00000569140 NOL10Q9BSC4 688 aaKnown RBP15.62■□□□□ 0.09
CDT1-203ENST00000569140 MYH2Q9UKX2 1941 aa15.61■□□□□ 0.09
CDT1-203ENST00000569140 ZBTB22O15209 634 aa15.61■□□□□ 0.09
CDT1-203ENST00000569140 CYP2E1P05181 493 aaPredicted RBP15.61■□□□□ 0.09
CDT1-203ENST00000569140 TNNI2P48788 182 aa15.61■□□□□ 0.09
CDT1-203ENST00000569140 PRKG1Q13976 671 aa15.61■□□□□ 0.09
CDT1-203ENST00000569140 NAA16Q6N069 864 aaPredicted RBP15.61■□□□□ 0.09
CDT1-203ENST00000569140 C2orf69Q8N8R5 385 aa15.61■□□□□ 0.09
CDT1-203ENST00000569140 DEFB129Q9H1M3 183 aa15.61■□□□□ 0.09
CDT1-203ENST00000569140 BOLA2Q9H3K6 86 aa15.61■□□□□ 0.09
CDT1-203ENST00000569140 PIH1D3Q9NQM4 214 aaKnown RBP15.61■□□□□ 0.09
CDT1-203ENST00000569140 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.61■□□□□ 0.09
CDT1-203ENST00000569140 MAST2Q6P0Q8 1798 aa15.61■□□□□ 0.09
CDT1-203ENST00000569140 GOLIM4O00461 696 aa15.6■□□□□ 0.09
CDT1-203ENST00000569140 CENPBP07199 599 aaPredicted RBP15.6■□□□□ 0.09
CDT1-203ENST00000569140 LDHCP07864 332 aa15.6■□□□□ 0.09
CDT1-203ENST00000569140 BTDP43251 543 aa15.6■□□□□ 0.09
CDT1-203ENST00000569140 RASA3Q14644 834 aa15.6■□□□□ 0.09
CDT1-203ENST00000569140 TSHZ3Q63HK5 1081 aa15.6■□□□□ 0.09
CDT1-203ENST00000569140 B4GALNT3Q6L9W6 998 aa15.6■□□□□ 0.09
CDT1-203ENST00000569140 APOBEC3HQ6NTF7 200 aaKnown RBP15.6■□□□□ 0.09
CDT1-203ENST00000569140 MRIQ9BWK5 157 aa15.6■□□□□ 0.09
CDT1-203ENST00000569140 ANTXR1Q9H6X2 564 aa15.6■□□□□ 0.09
CDT1-203ENST00000569140 GBA2Q9HCG7 927 aaPredicted RBP15.6■□□□□ 0.09
CDT1-203ENST00000569140 USP40Q9NVE5 1235 aa15.6■□□□□ 0.09
CDT1-203ENST00000569140 MROH7-TTC4A0A0A0MT08 1334 aa15.6■□□□□ 0.09
CDT1-203ENST00000569140 AKAP11Q9UKA4 1901 aa15.6■□□□□ 0.09
CDT1-203ENST00000569140 TTF1Q15361 905 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms