RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 SUPT16HQ9Y5B9 1047 aaKnown RBP26.59■■□□□ 1.85
NME3-210ENST00000567271 PCDHB15Q9Y5E8 787 aa26.59■■□□□ 1.85
NME3-210ENST00000567271 APBB1O00213 710 aa26.58■■□□□ 1.85
NME3-210ENST00000567271 UQCRFS1P1P0C7P4 283 aa26.58■■□□□ 1.85
NME3-210ENST00000567271 CCDC158Q5M9N0 1113 aa26.58■■□□□ 1.85
NME3-210ENST00000567271 IL1RAPL2Q9NP60 686 aa26.58■■□□□ 1.85
NME3-210ENST00000567271 TLR7Q9NYK1 1049 aaKnown RBP26.58■■□□□ 1.85
NME3-210ENST00000567271 SCAF8Q9UPN6 1271 aaKnown RBP26.58■■□□□ 1.85
NME3-210ENST00000567271 MAST3O60307 1309 aa26.58■■□□□ 1.85
NME3-210ENST00000567271 MYO1BO43795 1136 aa26.57■■□□□ 1.84
NME3-210ENST00000567271 PRDX5P30044 214 aa26.57■■□□□ 1.84
NME3-210ENST00000567271 ZGPATQ8N5A5 531 aaKnown RBP26.57■■□□□ 1.84
NME3-210ENST00000567271 SPATA5Q8NB90 893 aa26.57■■□□□ 1.84
NME3-210ENST00000567271 TEKT1Q969V4 418 aa26.57■■□□□ 1.84
NME3-210ENST00000567271 AOX1Q06278 1338 aa26.57■■□□□ 1.84
NME3-210ENST00000567271 TRPM7Q96QT4 1865 aa26.57■■□□□ 1.84
NME3-210ENST00000567271 LDHBP07195 334 aaKnown RBP26.56■■□□□ 1.84
NME3-210ENST00000567271 TTC39AQ5SRH9 613 aa26.56■■□□□ 1.84
NME3-210ENST00000567271 AACSQ86V21 672 aa26.56■■□□□ 1.84
NME3-210ENST00000567271 APOBEC3FQ8IUX4 373 aaKnown RBP26.56■■□□□ 1.84
NME3-210ENST00000567271 CDCA5Q96FF9 252 aa26.56■■□□□ 1.84
NME3-210ENST00000567271 ZNF512BQ96KM6 892 aaPredicted RBP26.56■■□□□ 1.84
NME3-210ENST00000567271 ZNF408Q9H9D4 720 aa26.56■■□□□ 1.84
NME3-210ENST00000567271 MCAMP43121 646 aa26.55■■□□□ 1.84
NME3-210ENST00000567271 HHIPL2Q6UWX4 724 aa26.55■■□□□ 1.84
NME3-210ENST00000567271 PI16Q6UXB8 463 aa26.55■■□□□ 1.84
NME3-210ENST00000567271 CLASRPQ8N2M8 674 aaKnown RBP26.55■■□□□ 1.84
NME3-210ENST00000567271 CLRN2A0PK11 232 aa26.54■■□□□ 1.84
NME3-210ENST00000567271 KLRG1Q96E93 195 aa26.54■■□□□ 1.84
NME3-210ENST00000567271 ZDHHC15Q96MV8 337 aa26.54■■□□□ 1.84
NME3-210ENST00000567271 DCTPP1Q9H773 170 aa26.54■■□□□ 1.84
NME3-210ENST00000567271 ABCF2Q9UG63 623 aa26.54■■□□□ 1.84
NME3-210ENST00000567271 ABT1Q9ULW3 272 aaKnown RBP26.54■■□□□ 1.84
NME3-210ENST00000567271 TDRD3Q9H7E2 651 aaKnown RBP26.53■■□□□ 1.84
NME3-210ENST00000567271 SPDYE2Q495Y8 402 aa26.52■■□□□ 1.84
NME3-210ENST00000567271 SPTY2D1Q68D10 685 aaPredicted RBP26.52■■□□□ 1.84
NME3-210ENST00000567271 APOBEC3HQ6NTF7 200 aaKnown RBP26.52■■□□□ 1.84
NME3-210ENST00000567271 ZNF70Q9UC06 446 aaPredicted RBP26.52■■□□□ 1.84
NME3-210ENST00000567271 TLL2Q9Y6L7 1015 aa26.52■■□□□ 1.84
NME3-210ENST00000567271 AAMPQ13685 434 aa26.51■■□□□ 1.83
NME3-210ENST00000567271 DIXDC1Q155Q3 683 aa26.51■■□□□ 1.83
NME3-210ENST00000567271 PRAMEF18Q5VWM3 479 aa26.51■■□□□ 1.83
NME3-210ENST00000567271 LRRCC1Q9C099 1032 aa26.51■■□□□ 1.83
NME3-210ENST00000567271 DEFB129Q9H1M3 183 aa26.51■■□□□ 1.83
NME3-210ENST00000567271 VEZTQ9HBM0 779 aa26.51■■□□□ 1.83
NME3-210ENST00000567271 SNRKQ9NRH2 765 aa26.51■■□□□ 1.83
NME3-210ENST00000567271 MKRN1Q9UHC7 482 aaKnown RBP26.51■■□□□ 1.83
NME3-210ENST00000567271 ECM29Q5VYK3 1845 aa26.51■■□□□ 1.83
NME3-210ENST00000567271 RASSF10A6NK89 507 aa26.5■■□□□ 1.83
NME3-210ENST00000567271 TBC1D9Q6ZT07 1266 aa26.5■■□□□ 1.83
NME3-210ENST00000567271 SAPCD2Q86UD0 394 aa26.5■■□□□ 1.83
NME3-210ENST00000567271 CNTNAP1P78357 1384 aa26.49■■□□□ 1.83
NME3-210ENST00000567271 IFIT2P09913 472 aaKnown RBP26.49■■□□□ 1.83
NME3-210ENST00000567271 DEFB115Q30KQ5 88 aa26.49■■□□□ 1.83
NME3-210ENST00000567271 ERICH6Q7L0X2 663 aa26.49■■□□□ 1.83
NME3-210ENST00000567271 GBA2Q9HCG7 927 aaPredicted RBP26.49■■□□□ 1.83
NME3-210ENST00000567271 DAGLAQ9Y4D2 1042 aa26.49■■□□□ 1.83
NME3-210ENST00000567271 DZIP1Q86YF9 867 aaKnown RBP26.48■■□□□ 1.83
NME3-210ENST00000567271 PPP2R3BQ9Y5P8 575 aa26.48■■□□□ 1.83
NME3-210ENST00000567271 AKAP11Q9UKA4 1901 aa26.47■■□□□ 1.83
NME3-210ENST00000567271 ZAP70P43403 619 aa26.47■■□□□ 1.83
NME3-210ENST00000567271 C2orf69Q8N8R5 385 aa26.47■■□□□ 1.83
NME3-210ENST00000567271 EXOC6Q8TAG9 804 aa26.47■■□□□ 1.83
NME3-210ENST00000567271 BCL11AQ9H165 835 aa26.47■■□□□ 1.83
NME3-210ENST00000567271 SMARCA5O60264 1052 aaPredicted RBP26.46■■□□□ 1.83
NME3-210ENST00000567271 CYP2E1P05181 493 aaPredicted RBP26.46■■□□□ 1.83
NME3-210ENST00000567271 MECOMQ03112 1051 aa26.46■■□□□ 1.83
NME3-210ENST00000567271 TNFAIP1Q13829 316 aa26.46■■□□□ 1.83
NME3-210ENST00000567271 RASA3Q14644 834 aa26.46■■□□□ 1.83
NME3-210ENST00000567271 SLF2Q8IX21 1173 aa26.46■■□□□ 1.83
NME3-210ENST00000567271 ZNF384Q8TF68 577 aa26.45■■□□□ 1.82
NME3-210ENST00000567271 NSUN4Q96CB9 384 aaKnown RBP26.45■■□□□ 1.82
NME3-210ENST00000567271 FAM163AQ96GL9 167 aaPredicted RBP26.45■■□□□ 1.82
NME3-210ENST00000567271 HHIPL1Q96JK4 782 aa26.45■■□□□ 1.82
NME3-210ENST00000567271 RAI14Q9P0K7 980 aa26.45■■□□□ 1.82
NME3-210ENST00000567271 LRP2BPQ9P2M1 347 aa26.45■■□□□ 1.82
NME3-210ENST00000567271 GAKO14976 1311 aa26.44■■□□□ 1.82
NME3-210ENST00000567271 TCP10L2B9ZVM9 353 aa26.44■■□□□ 1.82
NME3-210ENST00000567271 VEGFBP49765 207 aa26.44■■□□□ 1.82
NME3-210ENST00000567271 FKBP1BP68106 108 aa26.44■■□□□ 1.82
NME3-210ENST00000567271 NF2P35240 595 aa26.43■■□□□ 1.82
NME3-210ENST00000567271 CACNB3P54284 484 aa26.43■■□□□ 1.82
NME3-210ENST00000567271 HUNKP57058 714 aa26.43■■□□□ 1.82
NME3-210ENST00000567271 HDAC1Q13547 482 aaPredicted RBP26.43■■□□□ 1.82
NME3-210ENST00000567271 FKBP1CQ5VVH2 108 aa26.43■■□□□ 1.82
NME3-210ENST00000567271 CDC42EP5Q6NZY7 148 aa26.43■■□□□ 1.82
NME3-210ENST00000567271 JMYQ8N9B5 988 aa26.43■■□□□ 1.82
NME3-210ENST00000567271 TMOD2Q9NZR1 351 aa26.43■■□□□ 1.82
NME3-210ENST00000567271 TNNI2P48788 182 aa26.42■■□□□ 1.82
NME3-210ENST00000567271 GSTO1P78417 241 aa26.42■■□□□ 1.82
NME3-210ENST00000567271 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.42■■□□□ 1.82
NME3-210ENST00000567271 PIH1D3Q9NQM4 214 aaKnown RBP26.42■■□□□ 1.82
NME3-210ENST00000567271 MROH7-TTC4A0A0A0MT08 1334 aa26.41■■□□□ 1.82
NME3-210ENST00000567271 IGSF3O75054 1194 aa26.41■■□□□ 1.82
NME3-210ENST00000567271 USP40Q9NVE5 1235 aa26.41■■□□□ 1.82
NME3-210ENST00000567271 NDUFB9Q9Y6M9 179 aa26.41■■□□□ 1.82
NME3-210ENST00000567271 MYH2Q9UKX2 1941 aa26.41■■□□□ 1.82
NME3-210ENST00000567271 LDHCP07864 332 aa26.4■■□□□ 1.82
NME3-210ENST00000567271 SUPT20HL1Q3ZLR7 823 aa26.4■■□□□ 1.82
NME3-210ENST00000567271 NBPF12Q5TAG4 269 aaPredicted RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms