RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 JAG2Q9Y219 1238 aa11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 CD2APQ9Y5K6 639 aa11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 MAST3O60307 1309 aa11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 IL1R1P14778 569 aa11.59□□□□□ -0.55
HNRNPC-220ENST00000555585 UBE3CQ15386 1083 aa11.59□□□□□ -0.55
HNRNPC-220ENST00000555585 DOK7Q18PE1 504 aa11.59□□□□□ -0.55
HNRNPC-220ENST00000555585 GRIPAP1Q4V328 841 aa11.59□□□□□ -0.55
HNRNPC-220ENST00000555585 DALRD3Q5D0E6 543 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-220ENST00000555585 SPTY2D1Q68D10 685 aaPredicted RBP11.59□□□□□ -0.55
HNRNPC-220ENST00000555585 ZGPATQ8N5A5 531 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-220ENST00000555585 WDR66Q8TBY9 1149 aa11.59□□□□□ -0.55
HNRNPC-220ENST00000555585 FBXW7Q969H0 707 aa11.59□□□□□ -0.55
HNRNPC-220ENST00000555585 DDRGK1Q96HY6 314 aa11.59□□□□□ -0.55
HNRNPC-220ENST00000555585 COA1Q9GZY4 146 aa11.59□□□□□ -0.55
HNRNPC-220ENST00000555585 CCDC88AQ3V6T2 1871 aa11.59□□□□□ -0.55
HNRNPC-220ENST00000555585 CYP7A1P22680 504 aa11.58□□□□□ -0.56
HNRNPC-220ENST00000555585 SOGA3Q5TF21 947 aa11.58□□□□□ -0.56
HNRNPC-220ENST00000555585 RTKN2Q8IZC4 609 aa11.58□□□□□ -0.56
HNRNPC-220ENST00000555585 RTFDC1Q9BY42 306 aaPredicted RBP11.58□□□□□ -0.56
HNRNPC-220ENST00000555585 PUS7LQ9H0K6 701 aaKnown RBP11.58□□□□□ -0.56
HNRNPC-220ENST00000555585 RBM8AQ9Y5S9 174 aaKnown RBP11.58□□□□□ -0.56
HNRNPC-220ENST00000555585 MAST2Q6P0Q8 1798 aa11.57□□□□□ -0.56
HNRNPC-220ENST00000555585 TCRBV5S4A2TA0A5A2 114 aa11.57□□□□□ -0.56
HNRNPC-220ENST00000555585 LDHBP07195 334 aaKnown RBP11.57□□□□□ -0.56
HNRNPC-220ENST00000555585 HSPA4P34932 840 aa11.57□□□□□ -0.56
HNRNPC-220ENST00000555585 NAA16Q6N069 864 aaPredicted RBP11.57□□□□□ -0.56
HNRNPC-220ENST00000555585 MAP4K1Q92918 833 aa11.57□□□□□ -0.56
HNRNPC-220ENST00000555585 AIDAQ96BJ3 306 aa11.57□□□□□ -0.56
HNRNPC-220ENST00000555585 BRCA1P38398 1863 aaKnown RBP11.57□□□□□ -0.56
HNRNPC-220ENST00000555585 SALL1Q9NSC2 1324 aa11.57□□□□□ -0.56
HNRNPC-220ENST00000555585 GPAA1O43292 621 aa11.56□□□□□ -0.56
HNRNPC-220ENST00000555585 CLCN6P51797 869 aa11.56□□□□□ -0.56
HNRNPC-220ENST00000555585 GTF2IP78347 998 aa11.56□□□□□ -0.56
HNRNPC-220ENST00000555585 MECOMQ03112 1051 aa11.56□□□□□ -0.56
HNRNPC-220ENST00000555585 AOC3Q16853 763 aa11.56□□□□□ -0.56
HNRNPC-220ENST00000555585 DZIP1Q86YF9 867 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-220ENST00000555585 DBNDD1Q9H9R9 158 aa11.56□□□□□ -0.56
HNRNPC-220ENST00000555585 BCS1LQ9Y276 419 aa11.56□□□□□ -0.56
HNRNPC-220ENST00000555585 CHD4Q14839 1912 aa11.56□□□□□ -0.56
HNRNPC-220ENST00000555585 SNED1Q8TER0 1413 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 PPIP5K2O43314 1243 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 ECE2O60344 883 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 MBD4O95243 580 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 HSPD1P10809 573 aaKnown RBP11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 PRDX5P30044 214 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 ANAPC15P60006 121 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 VPS53Q5VIR6 699 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 RNF20Q5VTR2 975 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 CREB3L3Q68CJ9 461 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 MIGA1Q8NAN2 632 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 TBC1D22AQ8WUA7 517 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 NSUN4Q96CB9 384 aaKnown RBP11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 PSMD1Q99460 953 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 KIF2CQ99661 725 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 DSCC1Q9BVC3 393 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 ARMT1Q9H993 441 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 DAXXQ9UER7 740 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 PALD1Q9ULE6 856 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 FAM205AQ6ZU69 1335 aa11.55□□□□□ -0.56
HNRNPC-220ENST00000555585 MAGEB6P1A0A0J9YX57 407 aa11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 SLC27A2O14975 620 aa11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 IGSF3O75054 1194 aa11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 APPP05067 770 aa11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 LDHCP07864 332 aa11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 ZKSCAN1P17029 563 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 GSTO1P78417 241 aa11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 KIAA2012Q0VF49 1180 aa11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 BECN1Q14457 450 aa11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 NECTIN1Q15223 517 aa11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 RABEP1Q15276 862 aa11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 MFSD14BQ5SR56 506 aa11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 TTLL5Q6EMB2 1281 aa11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 PODNQ7Z5L7 613 aa11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 NLGN2Q8NFZ4 835 aa11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 IPO9Q96P70 1041 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 SNX14Q9Y5W7 946 aa11.54□□□□□ -0.56
HNRNPC-220ENST00000555585 GRIK5Q16478 980 aa11.53□□□□□ -0.56
HNRNPC-220ENST00000555585 TMED8Q6PL24 325 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-220ENST00000555585 ADGRA1Q86SQ6 560 aa11.53□□□□□ -0.56
HNRNPC-220ENST00000555585 LCORLQ8N3X6 602 aa11.53□□□□□ -0.56
HNRNPC-220ENST00000555585 LARGE2Q8N3Y3 721 aa11.53□□□□□ -0.56
HNRNPC-220ENST00000555585 STRBPQ96SI9 672 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-220ENST00000555585 NOL10Q9BSC4 688 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-220ENST00000555585 ZNF277Q9NRM2 450 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-220ENST00000555585 CTNNA3Q9UI47 895 aa11.53□□□□□ -0.56
HNRNPC-220ENST00000555585 SLC4A4Q9Y6R1 1079 aa11.53□□□□□ -0.56
HNRNPC-220ENST00000555585 MYH2Q9UKX2 1941 aa11.52□□□□□ -0.56
HNRNPC-220ENST00000555585 PATL2C9JE40 543 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-220ENST00000555585 GNAT2P19087 354 aa11.52□□□□□ -0.57
HNRNPC-220ENST00000555585 DYNLL1P63167 89 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-220ENST00000555585 SLF2Q8IX21 1173 aa11.52□□□□□ -0.57
HNRNPC-220ENST00000555585 RASEFQ8IZ41 740 aa11.52□□□□□ -0.57
HNRNPC-220ENST00000555585 ZNF384Q8TF68 577 aa11.52□□□□□ -0.57
HNRNPC-220ENST00000555585 VPS33BQ9H267 617 aa11.52□□□□□ -0.57
HNRNPC-220ENST00000555585 FER1L6Q2WGJ9 1857 aa11.52□□□□□ -0.57
HNRNPC-220ENST00000555585 ARFGEF1Q9Y6D6 1849 aa11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 USP17L3A6NCW0 530 aa11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 USP17L4A6NCW7 530 aa11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 F8W031 263 aaPredicted RBP11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 PRKAB2O43741 272 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms