RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 MXD3Q9BW11 206 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 BCL11AQ9H165 835 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 LRP2BPQ9P2M1 347 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 ABCF2Q9UG63 623 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 SERPINA10Q9UK55 444 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 ZBTB12Q9Y330 459 aaPredicted RBP7.12□□□□□ -1.27
ABCF1-207ENST00000542772 DOCK2Q92608 1830 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 ZNF541Q9H0D2 1346 aa7.11□□□□□ -1.27
ABCF1-207ENST00000542772 GPR75-ASB3A0A0A6YYF3 556 aa7.11□□□□□ -1.27
ABCF1-207ENST00000542772 RNF113AO15541 343 aaKnown RBP7.11□□□□□ -1.27
ABCF1-207ENST00000542772 MAP4K4O95819 1239 aaPredicted RBP7.11□□□□□ -1.27
ABCF1-207ENST00000542772 LDHCP07864 332 aa7.11□□□□□ -1.27
ABCF1-207ENST00000542772 USP17L8P0C7I0 530 aa7.11□□□□□ -1.27
ABCF1-207ENST00000542772 SCNN1DP51172 638 aa7.11□□□□□ -1.27
ABCF1-207ENST00000542772 MECOMQ03112 1051 aa7.11□□□□□ -1.27
ABCF1-207ENST00000542772 CHAF1AQ13111 956 aaPredicted RBP7.11□□□□□ -1.27
ABCF1-207ENST00000542772 LRRFIP1Q32MZ4 808 aaKnown RBP7.11□□□□□ -1.27
ABCF1-207ENST00000542772 SLF2Q8IX21 1173 aa7.11□□□□□ -1.27
ABCF1-207ENST00000542772 CNOT7Q9UIV1 285 aaKnown RBP7.11□□□□□ -1.27
ABCF1-207ENST00000542772 TTF2Q9UNY4 1162 aaKnown RBP7.11□□□□□ -1.27
ABCF1-207ENST00000542772 JAG2Q9Y219 1238 aa7.11□□□□□ -1.27
ABCF1-207ENST00000542772 RFX7Q2KHR2 1363 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 GAKO14976 1311 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 MAST3O60307 1309 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 TRIM6-TRIM34B2RNG4 842 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 HIP1O00291 1037 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 CHMLP26374 656 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 GSTO1P78417 241 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 ZMYM1Q5SVZ6 1142 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 SLC9C2Q5TAH2 1124 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 APOBEC3HQ6NTF7 200 aaKnown RBP7.1□□□□□ -1.27
ABCF1-207ENST00000542772 KIAA0825Q8IV33 1275 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 OGFOD1Q8N543 542 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 RILPL2Q969X0 211 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 ZDHHC15Q96MV8 337 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.1□□□□□ -1.27
ABCF1-207ENST00000542772 HELLSQ9NRZ9 838 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 GPRC5DQ9NZD1 345 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 PGAP2Q9UHJ9 254 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 HDAC9Q9UKV0 1011 aa7.1□□□□□ -1.27
ABCF1-207ENST00000542772 ZNF532Q9HCE3 1301 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 SCN4AP35499 1836 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 H7C1D1 291 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 NPM3O75607 178 aaKnown RBP7.09□□□□□ -1.27
ABCF1-207ENST00000542772 IDH1O75874 414 aaKnown RBP7.09□□□□□ -1.27
ABCF1-207ENST00000542772 CHGBP05060 677 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 PDE6AP16499 860 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 CYP7A1P22680 504 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 EPS15P42566 896 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 CRKP46108 304 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 GMPSP49915 693 aaPredicted RBP7.09□□□□□ -1.27
ABCF1-207ENST00000542772 RHBDL3P58872 404 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 NAA16Q6N069 864 aaPredicted RBP7.09□□□□□ -1.27
ABCF1-207ENST00000542772 ADGRA1Q86SQ6 560 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 CERS3Q8IU89 383 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 MAGEB6Q8N7X4 407 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 APPBP2Q92624 585 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 OSBP2Q969R2 916 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 PRMT6Q96LA8 375 aaPredicted RBP7.09□□□□□ -1.27
ABCF1-207ENST00000542772 RIOK1Q9BRS2 568 aaKnown RBP7.09□□□□□ -1.27
ABCF1-207ENST00000542772 FSD1Q9BTV5 496 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 PUS7LQ9H0K6 701 aaKnown RBP7.09□□□□□ -1.27
ABCF1-207ENST00000542772 MYOZ2Q9NPC6 264 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 RAI14Q9P0K7 980 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 GJA3Q9Y6H8 435 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 TIAM2Q8IVF5 1701 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 WDR90Q96KV7 1748 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 MYH7P12883 1935 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 MYH2Q9UKX2 1941 aa7.09□□□□□ -1.27
ABCF1-207ENST00000542772 MROH7-TTC4A0A0A0MT08 1334 aa7.08□□□□□ -1.28
ABCF1-207ENST00000542772 AK9Q5TCS8 1911 aa7.08□□□□□ -1.28
ABCF1-207ENST00000542772 WNT10BO00744 389 aa7.08□□□□□ -1.28
ABCF1-207ENST00000542772 BAG3O95817 575 aa7.08□□□□□ -1.28
ABCF1-207ENST00000542772 HIRAP54198 1017 aaPredicted RBP7.08□□□□□ -1.28
ABCF1-207ENST00000542772 DIXDC1Q155Q3 683 aa7.08□□□□□ -1.28
ABCF1-207ENST00000542772 CFAP100Q494V2 611 aa7.08□□□□□ -1.28
ABCF1-207ENST00000542772 SLFNL1Q499Z3 407 aa7.08□□□□□ -1.28
ABCF1-207ENST00000542772 MCMDC2Q4G0Z9 681 aa7.08□□□□□ -1.28
ABCF1-207ENST00000542772 FKBP1CQ5VVH2 108 aa7.08□□□□□ -1.28
ABCF1-207ENST00000542772 ZC3H15Q8WU90 426 aaKnown RBP7.08□□□□□ -1.28
ABCF1-207ENST00000542772 FBXW7Q969H0 707 aa7.08□□□□□ -1.28
ABCF1-207ENST00000542772 TEKT1Q969V4 418 aa7.08□□□□□ -1.28
ABCF1-207ENST00000542772 STRBPQ96SI9 672 aaKnown RBP7.08□□□□□ -1.28
ABCF1-207ENST00000542772 ADARB2Q9NS39 739 aaKnown RBP7.08□□□□□ -1.28
ABCF1-207ENST00000542772 MKRN1Q9UHC7 482 aaKnown RBP7.08□□□□□ -1.28
ABCF1-207ENST00000542772 DAGLAQ9Y4D2 1042 aa7.08□□□□□ -1.28
ABCF1-207ENST00000542772 SHTN1A0MZ66 631 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 IQCA1LA6NCM1 817 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 SPDYE2BA6NHP3 402 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 PATL2C9JE40 543 aaKnown RBP7.07□□□□□ -1.28
ABCF1-207ENST00000542772 F8W031 263 aaPredicted RBP7.07□□□□□ -1.28
ABCF1-207ENST00000542772 SGSM2O43147 1006 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 EPB41L2O43491 1005 aaKnown RBP7.07□□□□□ -1.28
ABCF1-207ENST00000542772 EGFRP00533 1210 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 SPDYE6P0CI01 402 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 VEGFAP15692 232 aaPredicted RBP7.07□□□□□ -1.28
ABCF1-207ENST00000542772 NMIQ13287 307 aaPredicted RBP7.07□□□□□ -1.28
ABCF1-207ENST00000542772 DLGAP5Q15398 846 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 NBPF9Q3BBW0 867 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 CDC42EP5Q6NZY7 148 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms