RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 SPEF2Q9C093 1822 aa14.65□□□□□ -0.06
SFSWAP-208ENST00000539506 HSP90AA4PQ58FG1 418 aa14.64□□□□□ -0.07
SFSWAP-208ENST00000539506 FBXO38Q6PIJ6 1188 aa14.64□□□□□ -0.07
SFSWAP-208ENST00000539506 GIGYF2Q6Y7W6 1299 aaKnown RBP14.64□□□□□ -0.07
SFSWAP-208ENST00000539506 NLRP10Q86W26 655 aa14.64□□□□□ -0.07
SFSWAP-208ENST00000539506 MB21D2Q8IYB1 491 aaPredicted RBP14.64□□□□□ -0.07
SFSWAP-208ENST00000539506 MAP3K15Q6ZN16 1313 aa14.64□□□□□ -0.07
SFSWAP-208ENST00000539506 ITGA6P23229 1130 aa14.64□□□□□ -0.07
SFSWAP-208ENST00000539506 FBXL16Q8N461 479 aa14.64□□□□□ -0.07
SFSWAP-208ENST00000539506 BBXQ8WY36 941 aaPredicted RBP14.64□□□□□ -0.07
SFSWAP-208ENST00000539506 AKAP2Q9Y2D5 859 aa14.64□□□□□ -0.07
SFSWAP-208ENST00000539506 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.64□□□□□ -0.07
SFSWAP-208ENST00000539506 ME1P48163 572 aa14.64□□□□□ -0.07
SFSWAP-208ENST00000539506 ENGASEQ8NFI3 743 aa14.64□□□□□ -0.07
SFSWAP-208ENST00000539506 KIF18AQ8NI77 898 aa14.64□□□□□ -0.07
SFSWAP-208ENST00000539506 MYH15Q9Y2K3 1946 aa14.63□□□□□ -0.07
SFSWAP-208ENST00000539506 A0A1B0GVL5 298 aa14.63□□□□□ -0.07
SFSWAP-208ENST00000539506 ERCC6LQ2NKX8 1250 aa14.63□□□□□ -0.07
SFSWAP-208ENST00000539506 KIF6Q6ZMV9 814 aa14.63□□□□□ -0.07
SFSWAP-208ENST00000539506 STK11IPQ8N1F8 1099 aa14.63□□□□□ -0.07
SFSWAP-208ENST00000539506 VGLL2Q8N8G2 317 aa14.63□□□□□ -0.07
SFSWAP-208ENST00000539506 EPC1Q9H2F5 836 aa14.63□□□□□ -0.07
SFSWAP-208ENST00000539506 GPAA1O43292 621 aa14.63□□□□□ -0.07
SFSWAP-208ENST00000539506 TAF7LQ5H9L4 462 aa14.63□□□□□ -0.07
SFSWAP-208ENST00000539506 TDRD7Q8NHU6 1098 aaKnown RBP14.63□□□□□ -0.07
SFSWAP-208ENST00000539506 APPBP2Q92624 585 aa14.63□□□□□ -0.07
SFSWAP-208ENST00000539506 FBXO3Q9UK99 471 aa14.63□□□□□ -0.07
SFSWAP-208ENST00000539506 PRC1O43663 620 aa14.62□□□□□ -0.07
SFSWAP-208ENST00000539506 KIF20AO95235 890 aa14.62□□□□□ -0.07
SFSWAP-208ENST00000539506 SMC2O95347 1197 aa14.62□□□□□ -0.07
SFSWAP-208ENST00000539506 POLR3DP05423 398 aaPredicted RBP14.62□□□□□ -0.07
SFSWAP-208ENST00000539506 LDHAL6AQ6ZMR3 332 aa14.62□□□□□ -0.07
SFSWAP-208ENST00000539506 DDX41Q9UJV9 622 aaKnown RBP14.62□□□□□ -0.07
SFSWAP-208ENST00000539506 SLFN14P0C7P3 912 aa14.62□□□□□ -0.07
SFSWAP-208ENST00000539506 IQCB1Q15051 598 aa14.62□□□□□ -0.07
SFSWAP-208ENST00000539506 METTL24Q5JXM2 366 aa14.62□□□□□ -0.07
SFSWAP-208ENST00000539506 PIH1D3Q9NQM4 214 aaKnown RBP14.62□□□□□ -0.07
SFSWAP-208ENST00000539506 BTG4Q9NY30 223 aa14.62□□□□□ -0.07
SFSWAP-208ENST00000539506 ZBTB1Q9Y2K1 713 aa14.62□□□□□ -0.07
SFSWAP-208ENST00000539506 AKAP11Q9UKA4 1901 aa14.62□□□□□ -0.07
SFSWAP-208ENST00000539506 CYP19A1P11511 503 aaPredicted RBP14.61□□□□□ -0.07
SFSWAP-208ENST00000539506 IMMTQ16891 758 aaKnown RBP14.61□□□□□ -0.07
SFSWAP-208ENST00000539506 SYT10Q6XYQ8 523 aa14.61□□□□□ -0.07
SFSWAP-208ENST00000539506 SDF4Q9BRK5 362 aa14.61□□□□□ -0.07
SFSWAP-208ENST00000539506 KLF18A0A0U1RQI7 1052 aa14.61□□□□□ -0.07
SFSWAP-208ENST00000539506 STARD3NLO95772 234 aa14.61□□□□□ -0.07
SFSWAP-208ENST00000539506 ZFYP08048 801 aaPredicted RBP14.61□□□□□ -0.07
SFSWAP-208ENST00000539506 CTSWP56202 376 aa14.61□□□□□ -0.07
SFSWAP-208ENST00000539506 SENP2Q9HC62 589 aa14.61□□□□□ -0.07
SFSWAP-208ENST00000539506 PCDHA7Q9UN72 937 aa14.61□□□□□ -0.07
SFSWAP-208ENST00000539506 CLIC4Q9Y696 253 aa14.61□□□□□ -0.07
SFSWAP-208ENST00000539506 STRCQ7RTU9 1775 aa14.6□□□□□ -0.07
SFSWAP-208ENST00000539506 SNAP23O00161 211 aa14.6□□□□□ -0.07
SFSWAP-208ENST00000539506 FSIP1Q8NA03 581 aa14.6□□□□□ -0.07
SFSWAP-208ENST00000539506 FEZ1Q99689 392 aa14.6□□□□□ -0.07
SFSWAP-208ENST00000539506 UBN2Q6ZU65 1347 aa14.6□□□□□ -0.07
SFSWAP-208ENST00000539506 CDHR2Q9BYE9 1310 aa14.6□□□□□ -0.07
SFSWAP-208ENST00000539506 SLIT2O94813 1529 aa14.6□□□□□ -0.07
SFSWAP-208ENST00000539506 MYO5AQ9Y4I1 1855 aaKnown RBP14.6□□□□□ -0.07
SFSWAP-208ENST00000539506 KIF28PB7ZC32 967 aa14.6□□□□□ -0.07
SFSWAP-208ENST00000539506 POLR3GO15318 223 aaPredicted RBP14.6□□□□□ -0.07
SFSWAP-208ENST00000539506 TBC1D10CQ8IV04 446 aa14.6□□□□□ -0.07
SFSWAP-208ENST00000539506 INCENPQ9NQS7 918 aa14.6□□□□□ -0.07
SFSWAP-208ENST00000539506 IRS4O14654 1257 aaPredicted RBP14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 ADD2P35612 726 aa14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 PHKA1P46020 1223 aa14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 RBM6P78332 1123 aaKnown RBP14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 SLC9C2Q5TAH2 1124 aa14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 TMC6Q7Z403 805 aa14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 HELBQ8NG08 1087 aaPredicted RBP14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 TEX13AQ9BXU3 409 aaPredicted RBP14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 TBC1D2BQ9UPU7 963 aa14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 PAXBP1Q9Y5B6 917 aa14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 ITGB4P16144 1822 aa14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 GOLGA8BA8MQT2 603 aa14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 CYB5R4Q7L1T6 521 aa14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 DDX60Q8IY21 1712 aaKnown RBP14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 ZNF213O14771 459 aa14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 KINO60870 393 aaKnown RBP14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 ZFP91Q96JP5 570 aaPredicted RBP14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 AIFM3Q96NN9 605 aa14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 NEDD4P46934 1319 aa14.59□□□□□ -0.07
SFSWAP-208ENST00000539506 BCL9O00512 1426 aa14.58□□□□□ -0.07
SFSWAP-208ENST00000539506 CCZ1BP86790 482 aa14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 CCZ1P86791 482 aaPredicted RBP14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 CCDC73Q6ZRK6 1079 aa14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 HOMER1Q86YM7 354 aa14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 DHX40Q8IX18 779 aaKnown RBP14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 CNNM1Q9NRU3 951 aa14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 IFNKQ9P0W0 207 aa14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 TRMT112Q9UI30 125 aaKnown RBP14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 WWC3Q9ULE0 1092 aa14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 RXRAP19793 462 aa14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 FAM160A1Q05DH4 1040 aa14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 FMR1NBQ8N0W7 255 aaPredicted RBP14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 LINC00301Q8NCQ3 95 aa14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 FBXO18Q8NFZ0 1043 aa14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 NCOA7Q8NI08 942 aa14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 ZNF446Q9NWS9 450 aa14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 RTEL1Q9NZ71 1219 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms