RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 LRP2BPQ9P2M1 347 aa20.84■□□□□ 0.93
CLN6-202ENST00000538696 SUGT1Q9Y2Z0 365 aa20.84■□□□□ 0.93
CLN6-202ENST00000538696 ECM29Q5VYK3 1845 aa20.84■□□□□ 0.93
CLN6-202ENST00000538696 SHTN1A0MZ66 631 aa20.83■□□□□ 0.93
CLN6-202ENST00000538696 IDH1O75874 414 aaKnown RBP20.83■□□□□ 0.93
CLN6-202ENST00000538696 KBTBD3Q8NAB2 608 aa20.83■□□□□ 0.93
CLN6-202ENST00000538696 ZNF384Q8TF68 577 aa20.83■□□□□ 0.93
CLN6-202ENST00000538696 EVI5LQ96CN4 794 aa20.83■□□□□ 0.93
CLN6-202ENST00000538696 RAI14Q9P0K7 980 aa20.83■□□□□ 0.93
CLN6-202ENST00000538696 TTF2Q9UNY4 1162 aaKnown RBP20.83■□□□□ 0.93
CLN6-202ENST00000538696 TRIM6-TRIM34B2RNG4 842 aa20.82■□□□□ 0.92
CLN6-202ENST00000538696 SCNN1DP51172 638 aa20.82■□□□□ 0.92
CLN6-202ENST00000538696 DPY19L2Q6NUT2 758 aa20.82■□□□□ 0.92
CLN6-202ENST00000538696 CNTROBQ8N137 903 aa20.82■□□□□ 0.92
CLN6-202ENST00000538696 RILPL2Q969X0 211 aa20.82■□□□□ 0.92
CLN6-202ENST00000538696 FSD1Q9BTV5 496 aa20.82■□□□□ 0.92
CLN6-202ENST00000538696 RFX7Q2KHR2 1363 aa20.82■□□□□ 0.92
CLN6-202ENST00000538696 MAST3O60307 1309 aa20.82■□□□□ 0.92
CLN6-202ENST00000538696 MFAP1P55081 439 aaKnown RBP20.81■□□□□ 0.92
CLN6-202ENST00000538696 MECOMQ03112 1051 aa20.81■□□□□ 0.92
CLN6-202ENST00000538696 DZIP1Q86YF9 867 aaKnown RBP20.81■□□□□ 0.92
CLN6-202ENST00000538696 DPF2Q92785 391 aa20.81■□□□□ 0.92
CLN6-202ENST00000538696 NSUN4Q96CB9 384 aaKnown RBP20.81■□□□□ 0.92
CLN6-202ENST00000538696 L3MBTL3Q96JM7 780 aaPredicted RBP20.81■□□□□ 0.92
CLN6-202ENST00000538696 CHGBP05060 677 aa20.8■□□□□ 0.92
CLN6-202ENST00000538696 MAP3K12Q12852 859 aa20.8■□□□□ 0.92
CLN6-202ENST00000538696 DIXDC1Q155Q3 683 aa20.8■□□□□ 0.92
CLN6-202ENST00000538696 MICALL2Q8IY33 904 aa20.8■□□□□ 0.92
CLN6-202ENST00000538696 GPRC5DQ9NZD1 345 aa20.8■□□□□ 0.92
CLN6-202ENST00000538696 CDK5RAP2Q96SN8 1893 aa20.8■□□□□ 0.92
CLN6-202ENST00000538696 IGSF3O75054 1194 aa20.79■□□□□ 0.92
CLN6-202ENST00000538696 USP17L8P0C7I0 530 aa20.79■□□□□ 0.92
CLN6-202ENST00000538696 PDE6AP16499 860 aa20.79■□□□□ 0.92
CLN6-202ENST00000538696 ZNF280AP59817 542 aaPredicted RBP20.79■□□□□ 0.92
CLN6-202ENST00000538696 MAGEB6Q8N7X4 407 aa20.79■□□□□ 0.92
CLN6-202ENST00000538696 CNOT7Q9UIV1 285 aaKnown RBP20.79■□□□□ 0.92
CLN6-202ENST00000538696 ADD2P35612 726 aa20.78■□□□□ 0.92
CLN6-202ENST00000538696 SLFNL1Q499Z3 407 aa20.78■□□□□ 0.92
CLN6-202ENST00000538696 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.78■□□□□ 0.92
CLN6-202ENST00000538696 HDAC9Q9UKV0 1011 aa20.78■□□□□ 0.92
CLN6-202ENST00000538696 GAKO14976 1311 aa20.78■□□□□ 0.92
CLN6-202ENST00000538696 TCRBV5S4A2TA0A5A2 114 aa20.78■□□□□ 0.92
CLN6-202ENST00000538696 CRKP46108 304 aa20.78■□□□□ 0.92
CLN6-202ENST00000538696 SLC9C2Q5TAH2 1124 aa20.78■□□□□ 0.92
CLN6-202ENST00000538696 NAA16Q6N069 864 aaPredicted RBP20.78■□□□□ 0.92
CLN6-202ENST00000538696 ADGRA1Q86SQ6 560 aa20.78■□□□□ 0.92
CLN6-202ENST00000538696 PCDHAC2Q9Y5I4 1007 aa20.78■□□□□ 0.92
CLN6-202ENST00000538696 MROH7-TTC4A0A0A0MT08 1334 aa20.77■□□□□ 0.92
CLN6-202ENST00000538696 ZNF532Q9HCE3 1301 aa20.77■□□□□ 0.92
CLN6-202ENST00000538696 FOCADQ5VW36 1801 aa20.77■□□□□ 0.91
CLN6-202ENST00000538696 LMOD1P29536 600 aaPredicted RBP20.77■□□□□ 0.91
CLN6-202ENST00000538696 EPS15P42566 896 aa20.77■□□□□ 0.91
CLN6-202ENST00000538696 GSTO1P78417 241 aa20.77■□□□□ 0.91
CLN6-202ENST00000538696 HDLBPQ00341 1268 aaKnown RBP20.77■□□□□ 0.91
CLN6-202ENST00000538696 UPF2Q9HAU5 1272 aaKnown RBP20.77■□□□□ 0.91
CLN6-202ENST00000538696 SERPINA10Q9UK55 444 aa20.77■□□□□ 0.91
CLN6-202ENST00000538696 DAGLAQ9Y4D2 1042 aa20.77■□□□□ 0.91
CLN6-202ENST00000538696 POTECB2RU33 542 aa20.76■□□□□ 0.91
CLN6-202ENST00000538696 RNF113AO15541 343 aaKnown RBP20.76■□□□□ 0.91
CLN6-202ENST00000538696 EGFRP00533 1210 aa20.76■□□□□ 0.91
CLN6-202ENST00000538696 CYP7A1P22680 504 aa20.76■□□□□ 0.91
CLN6-202ENST00000538696 CHMLP26374 656 aa20.76■□□□□ 0.91
CLN6-202ENST00000538696 UBE3CQ15386 1083 aa20.76■□□□□ 0.91
CLN6-202ENST00000538696 CFAP100Q494V2 611 aa20.76■□□□□ 0.91
CLN6-202ENST00000538696 ZSCAN25Q6NSZ9 544 aa20.76■□□□□ 0.91
CLN6-202ENST00000538696 CASC1Q6TDU7 716 aa20.76■□□□□ 0.91
CLN6-202ENST00000538696 HHIPL2Q6UWX4 724 aa20.76■□□□□ 0.91
CLN6-202ENST00000538696 OGFOD1Q8N543 542 aa20.76■□□□□ 0.91
CLN6-202ENST00000538696 TEKT1Q969V4 418 aa20.76■□□□□ 0.91
CLN6-202ENST00000538696 MRIQ9BWK5 157 aa20.76■□□□□ 0.91
CLN6-202ENST00000538696 MYOZ2Q9NPC6 264 aa20.76■□□□□ 0.91
CLN6-202ENST00000538696 H7C1D1 291 aa20.75■□□□□ 0.91
CLN6-202ENST00000538696 ZFYP08048 801 aaPredicted RBP20.75■□□□□ 0.91
CLN6-202ENST00000538696 MMP14P50281 582 aa20.75■□□□□ 0.91
CLN6-202ENST00000538696 TMED8Q6PL24 325 aaPredicted RBP20.75■□□□□ 0.91
CLN6-202ENST00000538696 SAMD7Q7Z3H4 446 aa20.75■□□□□ 0.91
CLN6-202ENST00000538696 SLF2Q8IX21 1173 aa20.75■□□□□ 0.91
CLN6-202ENST00000538696 TRPM4Q8TD43 1214 aa20.75■□□□□ 0.91
CLN6-202ENST00000538696 FAM163AQ96GL9 167 aaPredicted RBP20.75■□□□□ 0.91
CLN6-202ENST00000538696 HACL1Q9UJ83 578 aa20.75■□□□□ 0.91
CLN6-202ENST00000538696 LDHCP07864 332 aa20.74■□□□□ 0.91
CLN6-202ENST00000538696 KIF4BQ2VIQ3 1234 aa20.74■□□□□ 0.91
CLN6-202ENST00000538696 LRRFIP1Q32MZ4 808 aaKnown RBP20.74■□□□□ 0.91
CLN6-202ENST00000538696 TBC1D10BQ4KMP7 808 aaPredicted RBP20.74■□□□□ 0.91
CLN6-202ENST00000538696 MTMR14Q8NCE2 650 aa20.74■□□□□ 0.91
CLN6-202ENST00000538696 ZBED3Q96IU2 234 aaPredicted RBP20.74■□□□□ 0.91
CLN6-202ENST00000538696 ZDHHC15Q96MV8 337 aa20.74■□□□□ 0.91
CLN6-202ENST00000538696 TBC1D32Q96NH3 1257 aa20.74■□□□□ 0.91
CLN6-202ENST00000538696 ANP32AP39687 249 aaKnown RBP20.73■□□□□ 0.91
CLN6-202ENST00000538696 BTDP43251 543 aa20.73■□□□□ 0.91
CLN6-202ENST00000538696 RBM5P52756 815 aaKnown RBP eCLIP20.73■□□□□ 0.91
CLN6-202ENST00000538696 ZMYM1Q5SVZ6 1142 aa20.73■□□□□ 0.91
CLN6-202ENST00000538696 TICAM2Q86XR7 235 aa20.73■□□□□ 0.91
CLN6-202ENST00000538696 ZNF526Q8TF50 670 aaPredicted RBP20.73■□□□□ 0.91
CLN6-202ENST00000538696 APPBP2Q92624 585 aa20.73■□□□□ 0.91
CLN6-202ENST00000538696 ADARB2Q9NS39 739 aaKnown RBP20.73■□□□□ 0.91
CLN6-202ENST00000538696 GPR75-ASB3A0A0A6YYF3 556 aa20.72■□□□□ 0.91
CLN6-202ENST00000538696 IQCA1LA6NCM1 817 aa20.72■□□□□ 0.91
CLN6-202ENST00000538696 SPDYE2BA6NHP3 402 aa20.72■□□□□ 0.91
CLN6-202ENST00000538696 SPDYE6P0CI01 402 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 1394.1 ms