RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 DNAI1Q9UI46 699 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 ZHX1Q9UKY1 873 aaPredicted RBP6.74□□□□□ -1.33
CHD4-206ENST00000536999 PYCARDQ9ULZ3 195 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 RBM8AQ9Y5S9 174 aaKnown RBP6.74□□□□□ -1.33
CHD4-206ENST00000536999 DOT1LQ8TEK3 1739 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 PALLDQ8WX93 1383 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 CUL9Q8IWT3 2517 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 PNMA6EA0A0J9YXQ4 647 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 A0A0U1RQG5 324 aaPredicted RBP6.73□□□□□ -1.33
CHD4-206ENST00000536999 CCDC69A6NI79 296 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 CDKL5O76039 1030 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 LMNB1P20700 586 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 PIP4K2AP48426 406 aaPredicted RBP6.73□□□□□ -1.33
CHD4-206ENST00000536999 ETF1P62495 437 aaKnown RBP6.73□□□□□ -1.33
CHD4-206ENST00000536999 DGKZQ13574 1117 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 RRS1Q15050 365 aaKnown RBP6.73□□□□□ -1.33
CHD4-206ENST00000536999 IQCB1Q15051 598 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 BRD3Q15059 726 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 MTHFSDQ2M296 383 aaKnown RBP6.73□□□□□ -1.33
CHD4-206ENST00000536999 DEFB115Q30KQ5 88 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 KANK3Q6NY19 840 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 OLFM4Q6UX06 510 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 SYNE3Q6ZMZ3 975 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 TTC6Q86TZ1 520 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 LUZP1Q86V48 1076 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 HOMER1Q86YM7 354 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 LINS1Q8NG48 757 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 MRPS27Q92552 414 aaKnown RBP6.73□□□□□ -1.33
CHD4-206ENST00000536999 GTF3C6Q969F1 213 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 EXOC4Q96A65 974 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 NAA15Q9BXJ9 866 aaKnown RBP6.73□□□□□ -1.33
CHD4-206ENST00000536999 ARFGAP3Q9NP61 516 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 TSKSQ9UJT2 592 aa6.73□□□□□ -1.33
CHD4-206ENST00000536999 SLC27A2O14975 620 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 ARHGAP6O43182 974 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 PFKFB2O60825 505 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 H2AFXP16104 143 aaPredicted RBP6.72□□□□□ -1.33
CHD4-206ENST00000536999 ATP5JP18859 108 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 GTF2E1P29083 439 aaPredicted RBP6.72□□□□□ -1.33
CHD4-206ENST00000536999 CYP2C19P33261 490 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 USP8P40818 1118 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 TEFQ10587 303 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 DCTN1Q14203 1278 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 ME3Q16798 604 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 PLEKHO1Q53GL0 409 aaPredicted RBP6.72□□□□□ -1.33
CHD4-206ENST00000536999 BEND3Q5T5X7 828 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 TMED8Q6PL24 325 aaPredicted RBP6.72□□□□□ -1.33
CHD4-206ENST00000536999 KSR2Q6VAB6 950 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 LEKR1Q6ZMV7 388 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 PAXIP1Q6ZW49 1069 aaPredicted RBP6.72□□□□□ -1.33
CHD4-206ENST00000536999 NOL8Q76FK4 1167 aaKnown RBP6.72□□□□□ -1.33
CHD4-206ENST00000536999 DHX32Q7L7V1 743 aaKnown RBP6.72□□□□□ -1.33
CHD4-206ENST00000536999 CEP112Q8N8E3 955 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 CACTINQ8WUQ7 758 aaKnown RBP6.72□□□□□ -1.33
CHD4-206ENST00000536999 ZNF592Q92610 1267 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 RABGGTAQ92696 567 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 PYM1Q9BRP8 204 aaKnown RBP6.72□□□□□ -1.33
CHD4-206ENST00000536999 FSD1Q9BTV5 496 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 HELLSQ9NRZ9 838 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 RTEL1Q9NZ71 1219 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 ABT1Q9ULW3 272 aaKnown RBP6.72□□□□□ -1.33
CHD4-206ENST00000536999 PARP3Q9Y6F1 533 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 NCAPD2Q15021 1401 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 MON2Q7Z3U7 1717 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 UTYO14607 1347 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 WDR19Q8NEZ3 1342 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 PASKQ96RG2 1323 aa6.72□□□□□ -1.33
CHD4-206ENST00000536999 KIF13BQ9NQT8 1826 aa6.71□□□□□ -1.33
CHD4-206ENST00000536999 COL15A1P39059 1388 aa6.71□□□□□ -1.33
CHD4-206ENST00000536999 C4BP0C0L5 1744 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 KIAA1551Q9HCM1 1747 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 POTECB2RU33 542 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 F6X3S4 739 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 GNPATO15228 680 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 STX10O60499 249 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 SMC2O95347 1197 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 ZFYP08048 801 aaPredicted RBP6.71□□□□□ -1.34
CHD4-206ENST00000536999 POTEIP0CG38 1075 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 POTEJP0CG39 1038 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 HSP90B1P14625 803 aaKnown RBP6.71□□□□□ -1.34
CHD4-206ENST00000536999 ME1P48163 572 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 GRM1Q13255 1194 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 SEMA3FQ13275 785 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 FOXD4L6Q3SYB3 417 aaPredicted RBP6.71□□□□□ -1.34
CHD4-206ENST00000536999 MCMDC2Q4G0Z9 681 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 HSP90B2PQ58FF3 399 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 AKAP4Q5JQC9 854 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 HABP4Q5JVS0 413 aaKnown RBP6.71□□□□□ -1.34
CHD4-206ENST00000536999 FOXD4L3Q6VB84 417 aaPredicted RBP6.71□□□□□ -1.34
CHD4-206ENST00000536999 NUTM1Q86Y26 1132 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 RASEFQ8IZ41 740 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 NBPF15Q8N660 670 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 SMARCC2Q8TAQ2 1214 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 GOLGA5Q8TBA6 731 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 HNRNPLLQ8WVV9 542 aaKnown RBP6.71□□□□□ -1.34
CHD4-206ENST00000536999 DSCC1Q9BVC3 393 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 DNAJC25Q9H1X3 360 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 IL1RAPL2Q9NP60 686 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 POLR3EQ9NVU0 708 aa6.71□□□□□ -1.34
CHD4-206ENST00000536999 KIAA1468Q9P260 1216 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms