RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 PASKQ96RG2 1323 aa14.67□□□□□ -0.06
SSBP3-214ENST00000533209 SPDYE2BA6NHP3 402 aa14.67□□□□□ -0.06
SSBP3-214ENST00000533209 LDHBP07195 334 aaKnown RBP14.67□□□□□ -0.06
SSBP3-214ENST00000533209 SPDYE6P0CI01 402 aa14.67□□□□□ -0.06
SSBP3-214ENST00000533209 CRKP46108 304 aa14.67□□□□□ -0.06
SSBP3-214ENST00000533209 ANGEL2Q5VTE6 544 aaKnown RBP14.67□□□□□ -0.06
SSBP3-214ENST00000533209 TBC1D9Q6ZT07 1266 aa14.67□□□□□ -0.06
SSBP3-214ENST00000533209 ZGPATQ8N5A5 531 aaKnown RBP14.67□□□□□ -0.06
SSBP3-214ENST00000533209 GLIS2Q9BZE0 524 aaPredicted RBP14.67□□□□□ -0.06
SSBP3-214ENST00000533209 MAST3O60307 1309 aa14.66□□□□□ -0.06
SSBP3-214ENST00000533209 CYP2E1P05181 493 aaPredicted RBP14.66□□□□□ -0.06
SSBP3-214ENST00000533209 CENPBP07199 599 aaPredicted RBP14.66□□□□□ -0.06
SSBP3-214ENST00000533209 ZAP70P43403 619 aa14.66□□□□□ -0.06
SSBP3-214ENST00000533209 RBM5P52756 815 aaKnown RBP eCLIP14.66□□□□□ -0.06
SSBP3-214ENST00000533209 SPTY2D1Q68D10 685 aaPredicted RBP14.66□□□□□ -0.06
SSBP3-214ENST00000533209 HHIPL2Q6UWX4 724 aa14.66□□□□□ -0.06
SSBP3-214ENST00000533209 SMC5Q8IY18 1101 aa14.66□□□□□ -0.06
SSBP3-214ENST00000533209 TEKT1Q969V4 418 aa14.66□□□□□ -0.06
SSBP3-214ENST00000533209 DCPSQ96C86 337 aaKnown RBP14.66□□□□□ -0.06
SSBP3-214ENST00000533209 PRMT6Q96LA8 375 aaPredicted RBP14.66□□□□□ -0.06
SSBP3-214ENST00000533209 ABCF2Q9UG63 623 aa14.66□□□□□ -0.06
SSBP3-214ENST00000533209 PITPNM2Q9BZ72 1349 aa14.66□□□□□ -0.06
SSBP3-214ENST00000533209 MYH13Q9UKX3 1938 aa14.65□□□□□ -0.06
SSBP3-214ENST00000533209 TRAF5O00463 557 aa14.65□□□□□ -0.06
SSBP3-214ENST00000533209 FMR1Q06787 632 aaKnown RBP eCLIP14.65□□□□□ -0.06
SSBP3-214ENST00000533209 DIXDC1Q155Q3 683 aa14.65□□□□□ -0.06
SSBP3-214ENST00000533209 ERICH6Q7L0X2 663 aa14.65□□□□□ -0.06
SSBP3-214ENST00000533209 CDC37L1Q7L3B6 337 aa14.65□□□□□ -0.06
SSBP3-214ENST00000533209 KRT26Q7Z3Y9 468 aa14.65□□□□□ -0.06
SSBP3-214ENST00000533209 USP48Q86UV5 1035 aa14.65□□□□□ -0.06
SSBP3-214ENST00000533209 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.65□□□□□ -0.06
SSBP3-214ENST00000533209 NDUFB9Q9Y6M9 179 aa14.65□□□□□ -0.06
SSBP3-214ENST00000533209 ADM5C9JUS6 153 aa14.64□□□□□ -0.07
SSBP3-214ENST00000533209 ATP5JP18859 108 aa14.64□□□□□ -0.07
SSBP3-214ENST00000533209 ANKRD45Q5TZF3 282 aa14.64□□□□□ -0.07
SSBP3-214ENST00000533209 APOBEC3HQ6NTF7 200 aaKnown RBP14.64□□□□□ -0.07
SSBP3-214ENST00000533209 DLK2Q6UY11 383 aa14.64□□□□□ -0.07
SSBP3-214ENST00000533209 ZNF384Q8TF68 577 aa14.64□□□□□ -0.07
SSBP3-214ENST00000533209 ZDHHC15Q96MV8 337 aa14.64□□□□□ -0.07
SSBP3-214ENST00000533209 PIH1D3Q9NQM4 214 aaKnown RBP14.64□□□□□ -0.07
SSBP3-214ENST00000533209 DAGLAQ9Y4D2 1042 aa14.64□□□□□ -0.07
SSBP3-214ENST00000533209 AKAP11Q9UKA4 1901 aa14.63□□□□□ -0.07
SSBP3-214ENST00000533209 CLRN2A0PK11 232 aa14.63□□□□□ -0.07
SSBP3-214ENST00000533209 HSPA6P17066 643 aa14.63□□□□□ -0.07
SSBP3-214ENST00000533209 APLP1P51693 650 aa14.63□□□□□ -0.07
SSBP3-214ENST00000533209 MECOMQ03112 1051 aa14.63□□□□□ -0.07
SSBP3-214ENST00000533209 SPDYE2Q495Y8 402 aa14.63□□□□□ -0.07
SSBP3-214ENST00000533209 DZIP1Q86YF9 867 aaKnown RBP14.63□□□□□ -0.07
SSBP3-214ENST00000533209 SULF1Q8IWU6 871 aa14.63□□□□□ -0.07
SSBP3-214ENST00000533209 OTUD7AQ8TE49 926 aaPredicted RBP14.63□□□□□ -0.07
SSBP3-214ENST00000533209 NSUN4Q96CB9 384 aaKnown RBP14.63□□□□□ -0.07
SSBP3-214ENST00000533209 TDRD3Q9H7E2 651 aaKnown RBP14.63□□□□□ -0.07
SSBP3-214ENST00000533209 LRP2BPQ9P2M1 347 aa14.63□□□□□ -0.07
SSBP3-214ENST00000533209 ZNF70Q9UC06 446 aaPredicted RBP14.63□□□□□ -0.07
SSBP3-214ENST00000533209 SCAF8Q9UPN6 1271 aaKnown RBP14.63□□□□□ -0.07
SSBP3-214ENST00000533209 GAKO14976 1311 aa14.63□□□□□ -0.07
SSBP3-214ENST00000533209 MYO1BO43795 1136 aa14.62□□□□□ -0.07
SSBP3-214ENST00000533209 APOBEC3FQ8IUX4 373 aaKnown RBP14.62□□□□□ -0.07
SSBP3-214ENST00000533209 FAM163AQ96GL9 167 aaPredicted RBP14.62□□□□□ -0.07
SSBP3-214ENST00000533209 ANTXR1Q9H6X2 564 aa14.62□□□□□ -0.07
SSBP3-214ENST00000533209 ECHDC1Q9NTX5 307 aa14.62□□□□□ -0.07
SSBP3-214ENST00000533209 RAI14Q9P0K7 980 aa14.62□□□□□ -0.07
SSBP3-214ENST00000533209 SALL3Q9BXA9 1300 aa14.62□□□□□ -0.07
SSBP3-214ENST00000533209 TSHZ3Q63HK5 1081 aa14.61□□□□□ -0.07
SSBP3-214ENST00000533209 DNAJC2Q99543 621 aaKnown RBP14.61□□□□□ -0.07
SSBP3-214ENST00000533209 HAUS7Q99871 368 aa14.61□□□□□ -0.07
SSBP3-214ENST00000533209 BOLA2Q9H3K6 86 aa14.61□□□□□ -0.07
SSBP3-214ENST00000533209 IGSF3O75054 1194 aa14.6□□□□□ -0.07
SSBP3-214ENST00000533209 NUCB1Q02818 461 aa14.6□□□□□ -0.07
SSBP3-214ENST00000533209 CST9Q5W186 159 aa14.6□□□□□ -0.07
SSBP3-214ENST00000533209 B4GALNT3Q6L9W6 998 aa14.6□□□□□ -0.07
SSBP3-214ENST00000533209 CDC42EP5Q6NZY7 148 aa14.6□□□□□ -0.07
SSBP3-214ENST00000533209 SLF2Q8IX21 1173 aa14.6□□□□□ -0.07
SSBP3-214ENST00000533209 EDC3Q96F86 508 aaKnown RBP14.6□□□□□ -0.07
SSBP3-214ENST00000533209 GPATCH3Q96I76 525 aa14.6□□□□□ -0.07
SSBP3-214ENST00000533209 VEZTQ9HBM0 779 aa14.6□□□□□ -0.07
SSBP3-214ENST00000533209 ZBTB47Q9UFB7 747 aaPredicted RBP14.6□□□□□ -0.07
SSBP3-214ENST00000533209 MROH7-TTC4A0A0A0MT08 1334 aa14.6□□□□□ -0.07
SSBP3-214ENST00000533209 GOLIM4O00461 696 aa14.59□□□□□ -0.07
SSBP3-214ENST00000533209 IDH1O75874 414 aaKnown RBP14.59□□□□□ -0.07
SSBP3-214ENST00000533209 CELF2O95319 508 aaKnown RBP14.59□□□□□ -0.07
SSBP3-214ENST00000533209 LDHCP07864 332 aa14.59□□□□□ -0.07
SSBP3-214ENST00000533209 MX1P20591 662 aa14.59□□□□□ -0.07
SSBP3-214ENST00000533209 GSTO1P78417 241 aa14.59□□□□□ -0.07
SSBP3-214ENST00000533209 TTF1Q15361 905 aaPredicted RBP14.59□□□□□ -0.07
SSBP3-214ENST00000533209 PRAMEF18Q5VWM3 479 aa14.59□□□□□ -0.07
SSBP3-214ENST00000533209 NAA16Q6N069 864 aaPredicted RBP14.59□□□□□ -0.07
SSBP3-214ENST00000533209 CHD1LQ86WJ1 897 aa14.59□□□□□ -0.07
SSBP3-214ENST00000533209 CDCA5Q96FF9 252 aa14.59□□□□□ -0.07
SSBP3-214ENST00000533209 LNPKQ9C0E8 428 aa14.59□□□□□ -0.07
SSBP3-214ENST00000533209 DEFB129Q9H1M3 183 aa14.59□□□□□ -0.07
SSBP3-214ENST00000533209 PAG1Q9NWQ8 432 aa14.59□□□□□ -0.07
SSBP3-214ENST00000533209 TTC41PQ6P2S7 1318 aa14.59□□□□□ -0.07
SSBP3-214ENST00000533209 GPR75-ASB3A0A0A6YYF3 556 aa14.58□□□□□ -0.08
SSBP3-214ENST00000533209 TMEM88BA6NKF7 163 aa14.58□□□□□ -0.08
SSBP3-214ENST00000533209 TCP10L2B9ZVM9 353 aa14.58□□□□□ -0.08
SSBP3-214ENST00000533209 BTDP43251 543 aa14.58□□□□□ -0.08
SSBP3-214ENST00000533209 CACNB3P54284 484 aa14.58□□□□□ -0.08
SSBP3-214ENST00000533209 HTRA3P83110 453 aa14.58□□□□□ -0.08
SSBP3-214ENST00000533209 ADGRA1Q86SQ6 560 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms