RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 SULF2Q8IWU5 870 aa6.19□□□□□ -1.42
SKP1-212ENST00000523966 KLHL23Q8NBE8 558 aa6.19□□□□□ -1.42
SKP1-212ENST00000523966 WHAMMQ8TF30 809 aa6.19□□□□□ -1.42
SKP1-212ENST00000523966 C8orf37Q96NL8 207 aa6.19□□□□□ -1.42
SKP1-212ENST00000523966 CORO1BQ9BR76 489 aa6.19□□□□□ -1.42
SKP1-212ENST00000523966 CAPN10Q9HC96 672 aa6.19□□□□□ -1.42
SKP1-212ENST00000523966 DDX41Q9UJV9 622 aaKnown RBP6.19□□□□□ -1.42
SKP1-212ENST00000523966 CYP8B1Q9UNU6 501 aa6.19□□□□□ -1.42
SKP1-212ENST00000523966 PCDHGB7Q9Y5F8 929 aa6.19□□□□□ -1.42
SKP1-212ENST00000523966 ENC1O14682 589 aa6.18□□□□□ -1.42
SKP1-212ENST00000523966 RPS26P62854 115 aaKnown RBP6.18□□□□□ -1.42
SKP1-212ENST00000523966 SUZ12Q15022 739 aaKnown RBP6.18□□□□□ -1.42
SKP1-212ENST00000523966 NAALADL2Q58DX5 795 aa6.18□□□□□ -1.42
SKP1-212ENST00000523966 SNAP47Q5SQN1 464 aa6.18□□□□□ -1.42
SKP1-212ENST00000523966 HP1BP3Q5SSJ5 553 aaPredicted RBP6.18□□□□□ -1.42
SKP1-212ENST00000523966 DTWD1Q8N5C7 304 aa6.18□□□□□ -1.42
SKP1-212ENST00000523966 TRIM56Q9BRZ2 755 aaKnown RBP6.18□□□□□ -1.42
SKP1-212ENST00000523966 SPON2Q9BUD6 331 aa6.18□□□□□ -1.42
SKP1-212ENST00000523966 CARD10Q9BWT7 1032 aa6.18□□□□□ -1.42
SKP1-212ENST00000523966 COPRSQ9NQ92 184 aa6.18□□□□□ -1.42
SKP1-212ENST00000523966 MKL2Q9ULH7 1088 aa6.18□□□□□ -1.42
SKP1-212ENST00000523966 F6X3S4 739 aa6.17□□□□□ -1.42
SKP1-212ENST00000523966 EIF4A3P38919 411 aaKnown RBP6.17□□□□□ -1.42
SKP1-212ENST00000523966 BAG6P46379 1132 aa6.17□□□□□ -1.42
SKP1-212ENST00000523966 TRIM28Q13263 835 aaKnown RBP6.17□□□□□ -1.42
SKP1-212ENST00000523966 POU4F3Q15319 338 aa6.17□□□□□ -1.42
SKP1-212ENST00000523966 LLGL2Q6P1M3 1020 aa6.17□□□□□ -1.42
SKP1-212ENST00000523966 ADAMTSL4Q6UY14 1074 aa6.17□□□□□ -1.42
SKP1-212ENST00000523966 KCNB2Q92953 911 aa6.17□□□□□ -1.42
SKP1-212ENST00000523966 MIR1-1HGQ9H1L0 117 aa6.17□□□□□ -1.42
SKP1-212ENST00000523966 ACBD3Q9H3P7 528 aa6.17□□□□□ -1.42
SKP1-212ENST00000523966 GNB5O14775 395 aa6.16□□□□□ -1.42
SKP1-212ENST00000523966 PAGE1O75459 146 aa6.16□□□□□ -1.42
SKP1-212ENST00000523966 NID1P14543 1247 aa6.16□□□□□ -1.42
SKP1-212ENST00000523966 CD68P34810 354 aaPredicted RBP6.16□□□□□ -1.42
SKP1-212ENST00000523966 DGKGP49619 791 aa6.16□□□□□ -1.42
SKP1-212ENST00000523966 RAD51AP2Q09MP3 1159 aa6.16□□□□□ -1.42
SKP1-212ENST00000523966 PRRT3Q5FWE3 981 aa6.16□□□□□ -1.42
SKP1-212ENST00000523966 AGMOQ6ZNB7 445 aa6.16□□□□□ -1.42
SKP1-212ENST00000523966 KIAA0825Q8IV33 1275 aa6.16□□□□□ -1.42
SKP1-212ENST00000523966 BEND7Q8N7W2 519 aaPredicted RBP6.16□□□□□ -1.42
SKP1-212ENST00000523966 ACSBG1Q96GR2 724 aa6.16□□□□□ -1.42
SKP1-212ENST00000523966 USP26Q9BXU7 913 aa6.16□□□□□ -1.42
SKP1-212ENST00000523966 NOP53Q9NZM5 478 aaKnown RBP6.16□□□□□ -1.42
SKP1-212ENST00000523966 TLR6Q9Y2C9 796 aa6.16□□□□□ -1.42
SKP1-212ENST00000523966 SUPT16HQ9Y5B9 1047 aaKnown RBP6.16□□□□□ -1.42
SKP1-212ENST00000523966 PF4P02776 101 aa6.15□□□□□ -1.42
SKP1-212ENST00000523966 GSTP1P09211 210 aaKnown RBP6.15□□□□□ -1.42
SKP1-212ENST00000523966 BMP6P22004 513 aa6.15□□□□□ -1.42
SKP1-212ENST00000523966 RACK1P63244 317 aaKnown RBP6.15□□□□□ -1.42
SKP1-212ENST00000523966 LMNB2Q03252 620 aa6.15□□□□□ -1.42
SKP1-212ENST00000523966 FAM160A1Q05DH4 1040 aa6.15□□□□□ -1.42
SKP1-212ENST00000523966 CAMK2GQ13555 558 aaPredicted RBP6.15□□□□□ -1.42
SKP1-212ENST00000523966 PDE3AQ14432 1141 aa6.15□□□□□ -1.42
SKP1-212ENST00000523966 SF3A1Q15459 793 aaKnown RBP6.15□□□□□ -1.42
SKP1-212ENST00000523966 LCE2CQ5TA81 110 aa6.15□□□□□ -1.42
SKP1-212ENST00000523966 MAP1SQ66K74 1059 aaPredicted RBP6.15□□□□□ -1.42
SKP1-212ENST00000523966 ZSCAN1Q8NBB4 408 aa6.15□□□□□ -1.42
SKP1-212ENST00000523966 PHC3Q8NDX5 983 aa6.15□□□□□ -1.42
SKP1-212ENST00000523966 ZNF296Q8WUU4 475 aaPredicted RBP6.15□□□□□ -1.42
SKP1-212ENST00000523966 JARID2Q92833 1246 aaPredicted RBP6.15□□□□□ -1.42
SKP1-212ENST00000523966 KLHDC7BQ96G42 594 aa6.15□□□□□ -1.42
SKP1-212ENST00000523966 SPATA32Q96LK8 384 aa6.15□□□□□ -1.42
SKP1-212ENST00000523966 PLVAPQ9BX97 442 aa6.15□□□□□ -1.42
SKP1-212ENST00000523966 USP35Q9P2H5 1018 aa6.15□□□□□ -1.42
SKP1-212ENST00000523966 BPNT1O95861 308 aa6.14□□□□□ -1.43
SKP1-212ENST00000523966 MAOBP27338 520 aa6.14□□□□□ -1.43
SKP1-212ENST00000523966 NLRP12P59046 1061 aa6.14□□□□□ -1.43
SKP1-212ENST00000523966 INSM1Q01101 510 aaPredicted RBP6.14□□□□□ -1.43
SKP1-212ENST00000523966 PAK2Q13177 524 aa6.14□□□□□ -1.43
SKP1-212ENST00000523966 SETDB1Q15047 1291 aa6.14□□□□□ -1.43
SKP1-212ENST00000523966 SCARA3Q6AZY7 606 aa6.14□□□□□ -1.43
SKP1-212ENST00000523966 CCDC84Q86UT8 332 aaPredicted RBP6.14□□□□□ -1.43
SKP1-212ENST00000523966 FBXO11Q86XK2 927 aa6.14□□□□□ -1.43
SKP1-212ENST00000523966 GOLM1Q8NBJ4 401 aa6.14□□□□□ -1.43
SKP1-212ENST00000523966 ZC3H12CQ9C0D7 883 aaKnown RBP6.14□□□□□ -1.43
SKP1-212ENST00000523966 RAD18Q9NS91 495 aa6.14□□□□□ -1.43
SKP1-212ENST00000523966 WIPF1O43516 503 aa6.13□□□□□ -1.43
SKP1-212ENST00000523966 TRIM37O94972 964 aa6.13□□□□□ -1.43
SKP1-212ENST00000523966 ARHGEF15O94989 841 aa6.13□□□□□ -1.43
SKP1-212ENST00000523966 TFE3P19532 575 aaPredicted RBP6.13□□□□□ -1.43
SKP1-212ENST00000523966 TNNI2P48788 182 aa6.13□□□□□ -1.43
SKP1-212ENST00000523966 ARID5AQ03989 594 aa6.13□□□□□ -1.43
SKP1-212ENST00000523966 DUOXA2Q1HG44 320 aa6.13□□□□□ -1.43
SKP1-212ENST00000523966 HGSNATQ68CP4 663 aa6.13□□□□□ -1.43
SKP1-212ENST00000523966 TRIM42Q8IWZ5 723 aa6.13□□□□□ -1.43
SKP1-212ENST00000523966 GRIN3AQ8TCU5 1115 aa6.13□□□□□ -1.43
SKP1-212ENST00000523966 GPRASP2Q96D09 838 aa6.13□□□□□ -1.43
SKP1-212ENST00000523966 PPP1R1BQ9UD71 204 aaPredicted RBP6.13□□□□□ -1.43
SKP1-212ENST00000523966 A0A0A0MRY4 1105 aa6.12□□□□□ -1.43
SKP1-212ENST00000523966 SLFN14P0C7P3 912 aa6.12□□□□□ -1.43
SKP1-212ENST00000523966 DNAJA1P31689 397 aaKnown RBP6.12□□□□□ -1.43
SKP1-212ENST00000523966 SNRPNP63162 240 aaKnown RBP6.12□□□□□ -1.43
SKP1-212ENST00000523966 FMR1NBQ8N0W7 255 aaPredicted RBP6.12□□□□□ -1.43
SKP1-212ENST00000523966 SLC43A3Q8NBI5 491 aa6.12□□□□□ -1.43
SKP1-212ENST00000523966 SREK1Q8WXA9 508 aaKnown RBP6.12□□□□□ -1.43
SKP1-212ENST00000523966 DRC1Q96MC2 740 aa6.12□□□□□ -1.43
SKP1-212ENST00000523966 NT5C1AQ9BXI3 368 aa6.12□□□□□ -1.43
SKP1-212ENST00000523966 ROBO2Q9HCK4 1378 aa6.12□□□□□ -1.43
SKP1-212ENST00000523966 KRT82Q9NSB4 513 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms