RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 GSPT1P15170 499 aaKnown RBP17.12■□□□□ 0.33
SDC2-203ENST00000519587 RPS12P25398 132 aaKnown RBP17.12■□□□□ 0.33
SDC2-203ENST00000519587 CXCL9Q07325 125 aa17.12■□□□□ 0.33
SDC2-203ENST00000519587 RSBN1LQ6PCB5 846 aaPredicted RBP17.12■□□□□ 0.33
SDC2-203ENST00000519587 ERICH6Q7L0X2 663 aa17.12■□□□□ 0.33
SDC2-203ENST00000519587 DZIP1Q86YF9 867 aaKnown RBP17.12■□□□□ 0.33
SDC2-203ENST00000519587 RILPL2Q969X0 211 aa17.12■□□□□ 0.33
SDC2-203ENST00000519587 RAI14Q9P0K7 980 aa17.12■□□□□ 0.33
SDC2-203ENST00000519587 NDUFB9Q9Y6M9 179 aa17.12■□□□□ 0.33
SDC2-203ENST00000519587 HIP1O00291 1037 aa17.11■□□□□ 0.33
SDC2-203ENST00000519587 ZFYP08048 801 aaPredicted RBP17.11■□□□□ 0.33
SDC2-203ENST00000519587 VIL1P09327 827 aaKnown RBP17.11■□□□□ 0.33
SDC2-203ENST00000519587 SLF2Q8IX21 1173 aa17.11■□□□□ 0.33
SDC2-203ENST00000519587 GPC2Q8N158 579 aa17.11■□□□□ 0.33
SDC2-203ENST00000519587 AGBL3Q8NEM8 1001 aa17.11■□□□□ 0.33
SDC2-203ENST00000519587 PIH1D3Q9NQM4 214 aaKnown RBP17.11■□□□□ 0.33
SDC2-203ENST00000519587 ZNF541Q9H0D2 1346 aa17.11■□□□□ 0.33
SDC2-203ENST00000519587 MYH2Q9UKX2 1941 aa17.1■□□□□ 0.33
SDC2-203ENST00000519587 SDSP20132 328 aa17.1■□□□□ 0.33
SDC2-203ENST00000519587 MMP14P50281 582 aa17.1■□□□□ 0.33
SDC2-203ENST00000519587 GSTO1P78417 241 aa17.1■□□□□ 0.33
SDC2-203ENST00000519587 FSTL1Q12841 308 aa17.1■□□□□ 0.33
SDC2-203ENST00000519587 TBC1D9Q6ZT07 1266 aa17.1■□□□□ 0.33
SDC2-203ENST00000519587 EDC3Q96F86 508 aaKnown RBP17.1■□□□□ 0.33
SDC2-203ENST00000519587 ANTXR1Q9H6X2 564 aa17.1■□□□□ 0.33
SDC2-203ENST00000519587 KCNQ5Q9NR82 932 aa17.1■□□□□ 0.33
SDC2-203ENST00000519587 GJA3Q9Y6H8 435 aa17.1■□□□□ 0.33
SDC2-203ENST00000519587 PRDX5P30044 214 aa17.09■□□□□ 0.33
SDC2-203ENST00000519587 DPY19L2Q6NUT2 758 aa17.09■□□□□ 0.33
SDC2-203ENST00000519587 CASC1Q6TDU7 716 aa17.09■□□□□ 0.33
SDC2-203ENST00000519587 HDAC9Q9UKV0 1011 aa17.09■□□□□ 0.33
SDC2-203ENST00000519587 NAA16Q6N069 864 aaPredicted RBP17.08■□□□□ 0.32
SDC2-203ENST00000519587 OGFOD1Q8N543 542 aa17.08■□□□□ 0.32
SDC2-203ENST00000519587 CERS5Q8N5B7 392 aa17.08■□□□□ 0.32
SDC2-203ENST00000519587 DIAPH3Q9NSV4 1193 aa17.08■□□□□ 0.32
SDC2-203ENST00000519587 TTF2Q9UNY4 1162 aaKnown RBP17.08■□□□□ 0.32
SDC2-203ENST00000519587 LDHCP07864 332 aa17.07■□□□□ 0.32
SDC2-203ENST00000519587 PDE6AP16499 860 aa17.07■□□□□ 0.32
SDC2-203ENST00000519587 MECOMQ03112 1051 aa17.07■□□□□ 0.32
SDC2-203ENST00000519587 SLC9C2Q5TAH2 1124 aa17.07■□□□□ 0.32
SDC2-203ENST00000519587 KIAA0825Q8IV33 1275 aa17.07■□□□□ 0.32
SDC2-203ENST00000519587 NOL10Q9BSC4 688 aaKnown RBP17.07■□□□□ 0.32
SDC2-203ENST00000519587 F8W031 263 aaPredicted RBP17.06■□□□□ 0.32
SDC2-203ENST00000519587 RNF113AO15541 343 aaKnown RBP17.06■□□□□ 0.32
SDC2-203ENST00000519587 CDC45O75419 566 aa17.06■□□□□ 0.32
SDC2-203ENST00000519587 USP17L8P0C7I0 530 aa17.06■□□□□ 0.32
SDC2-203ENST00000519587 LMOD1P29536 600 aaPredicted RBP17.06■□□□□ 0.32
SDC2-203ENST00000519587 GMPSP49915 693 aaPredicted RBP17.06■□□□□ 0.32
SDC2-203ENST00000519587 HDLBPQ00341 1268 aaKnown RBP17.06■□□□□ 0.32
SDC2-203ENST00000519587 MAGEB6Q8N7X4 407 aa17.06■□□□□ 0.32
SDC2-203ENST00000519587 DPF2Q92785 391 aa17.06■□□□□ 0.32
SDC2-203ENST00000519587 TEKT1Q969V4 418 aa17.06■□□□□ 0.32
SDC2-203ENST00000519587 GMLQ99445 158 aa17.06■□□□□ 0.32
SDC2-203ENST00000519587 MXD3Q9BW11 206 aa17.06■□□□□ 0.32
SDC2-203ENST00000519587 SCN4AP35499 1836 aa17.05■□□□□ 0.32
SDC2-203ENST00000519587 PCNTO95613 3336 aa17.05■□□□□ 0.32
SDC2-203ENST00000519587 ADD2P35612 726 aa17.05■□□□□ 0.32
SDC2-203ENST00000519587 UBE3CQ15386 1083 aa17.05■□□□□ 0.32
SDC2-203ENST00000519587 CERS3Q8IU89 383 aa17.05■□□□□ 0.32
SDC2-203ENST00000519587 RUFY2Q8WXA3 655 aa17.05■□□□□ 0.32
SDC2-203ENST00000519587 NSUN4Q96CB9 384 aaKnown RBP17.05■□□□□ 0.32
SDC2-203ENST00000519587 SERPINA10Q9UK55 444 aa17.05■□□□□ 0.32
SDC2-203ENST00000519587 ADAMTSL1Q8N6G6 1762 aa17.05■□□□□ 0.32
SDC2-203ENST00000519587 MROH7-TTC4A0A0A0MT08 1334 aa17.04■□□□□ 0.32
SDC2-203ENST00000519587 ZNF532Q9HCE3 1301 aa17.04■□□□□ 0.32
SDC2-203ENST00000519587 CYP7A1P22680 504 aa17.04■□□□□ 0.32
SDC2-203ENST00000519587 APPBP2Q92624 585 aa17.04■□□□□ 0.32
SDC2-203ENST00000519587 ZBTB12Q9Y330 459 aaPredicted RBP17.04■□□□□ 0.32
SDC2-203ENST00000519587 ECM29Q5VYK3 1845 aa17.04■□□□□ 0.32
SDC2-203ENST00000519587 RAD50Q92878 1312 aa17.03■□□□□ 0.32
SDC2-203ENST00000519587 GLTPD2A6NH11 291 aa17.03■□□□□ 0.32
SDC2-203ENST00000519587 H7C1D1 291 aa17.03■□□□□ 0.32
SDC2-203ENST00000519587 HSPA1AP0DMV8 641 aaKnown RBP17.03■□□□□ 0.32
SDC2-203ENST00000519587 HSPA1BP0DMV9 641 aaKnown RBP17.03■□□□□ 0.32
SDC2-203ENST00000519587 GRIK5Q16478 980 aa17.03■□□□□ 0.32
SDC2-203ENST00000519587 HHIPL2Q6UWX4 724 aa17.03■□□□□ 0.32
SDC2-203ENST00000519587 MICALL2Q8IY33 904 aa17.03■□□□□ 0.32
SDC2-203ENST00000519587 L3MBTL3Q96JM7 780 aaPredicted RBP17.03■□□□□ 0.32
SDC2-203ENST00000519587 MRIQ9BWK5 157 aa17.03■□□□□ 0.32
SDC2-203ENST00000519587 GAKO14976 1311 aa17.02■□□□□ 0.32
SDC2-203ENST00000519587 IQCA1LA6NCM1 817 aa17.02■□□□□ 0.32
SDC2-203ENST00000519587 EIF5BO60841 1220 aaKnown RBP17.02■□□□□ 0.32
SDC2-203ENST00000519587 DDNO94850 711 aaPredicted RBP17.02■□□□□ 0.32
SDC2-203ENST00000519587 SLC34A2O95436 690 aa17.02■□□□□ 0.32
SDC2-203ENST00000519587 BAG3O95817 575 aa17.02■□□□□ 0.32
SDC2-203ENST00000519587 PLCG2P16885 1265 aa17.02■□□□□ 0.32
SDC2-203ENST00000519587 CRKP46108 304 aa17.02■□□□□ 0.32
SDC2-203ENST00000519587 SCNN1DP51172 638 aa17.02■□□□□ 0.32
SDC2-203ENST00000519587 RBM5P52756 815 aaKnown RBP eCLIP17.02■□□□□ 0.328e-10■□□□□ 10.2
SDC2-203ENST00000519587 MFAP1P55081 439 aaKnown RBP17.02■□□□□ 0.32
SDC2-203ENST00000519587 ZNF280AP59817 542 aaPredicted RBP17.02■□□□□ 0.32
SDC2-203ENST00000519587 DIXDC1Q155Q3 683 aa17.02■□□□□ 0.32
SDC2-203ENST00000519587 ZMYM1Q5SVZ6 1142 aa17.02■□□□□ 0.32
SDC2-203ENST00000519587 GPRC5DQ9NZD1 345 aa17.02■□□□□ 0.32
SDC2-203ENST00000519587 TCRBV5S4A2TA0A5A2 114 aa17.01■□□□□ 0.31
SDC2-203ENST00000519587 CHMLP26374 656 aa17.01■□□□□ 0.31
SDC2-203ENST00000519587 DLGAP5Q15398 846 aa17.01■□□□□ 0.31
SDC2-203ENST00000519587 FAM163AQ96GL9 167 aaPredicted RBP17.01■□□□□ 0.31
SDC2-203ENST00000519587 ZDHHC15Q96MV8 337 aa17.01■□□□□ 0.31
SDC2-203ENST00000519587 HELLSQ9NRZ9 838 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms