RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 MAIP1Q8WWC4 291 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 UQCRFS1P1P0C7P4 283 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 RABEP2Q9H5N1 569 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 BABAM1Q9NWV8 329 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 GAS8O95995 478 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 NUF2Q9BZD4 464 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 CETN3O15182 167 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 TMED8Q6PL24 325 aaPredicted RBP9.38□□□□□ -0.91
HTT-208ENST00000510626 CCDC152Q4G0S7 254 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 SRGAP1Q7Z6B7 1085 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 IGSF22Q8N9C0 903 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 SELENOSQ9BQE4 189 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 TRIM4Q9C037 500 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 SYNCQ9H7C4 482 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 HIP1RO75146 1068 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 CEP85LQ5SZL2 805 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 CNNM4Q6P4Q7 775 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 ODF2LQ9ULJ1 636 aa9.38□□□□□ -0.91
HTT-208ENST00000510626 RILPL1Q5EBL4 403 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 DENND2CQ68D51 928 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 RNF123Q5XPI4 1314 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 DNAJC25Q9H1X3 360 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 WDHD1O75717 1129 aaPredicted RBP9.37□□□□□ -0.91
HTT-208ENST00000510626 PSMD7P51665 324 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 NBPF10Q6P3W6 841 aaKnown RBP9.37□□□□□ -0.91
HTT-208ENST00000510626 DRC3Q9H069 523 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 SNX16P57768 344 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 SYT10Q6XYQ8 523 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 RUFY3Q7L099 469 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 DRP2Q13474 957 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 CCDC68Q9H2F9 335 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 IFNKQ9P0W0 207 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 TEX14Q8IWB6 1497 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 C8orf74Q6P047 294 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 MKNK2Q9HBH9 465 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 POLR3DP05423 398 aaPredicted RBP9.37□□□□□ -0.91
HTT-208ENST00000510626 SMC1BQ8NDV3 1235 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 CNOT10Q9H9A5 744 aaKnown RBP9.37□□□□□ -0.91
HTT-208ENST00000510626 NT5C2P49902 561 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 SNCBQ16143 134 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 PPP1R12CQ9BZL4 782 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 EIF2AQ9BY44 585 aaKnown RBP9.37□□□□□ -0.91
HTT-208ENST00000510626 GKAP1Q5VSY0 366 aaPredicted RBP9.37□□□□□ -0.91
HTT-208ENST00000510626 SMARCC2Q8TAQ2 1214 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 RNF14Q9UBS8 474 aa9.37□□□□□ -0.91
HTT-208ENST00000510626 FLOT1O75955 427 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 ASIC1P78348 528 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 DNM1Q05193 864 aaKnown RBP9.36□□□□□ -0.91
HTT-208ENST00000510626 TRIM58Q8NG06 486 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 CDC5LQ99459 802 aaKnown RBP9.36□□□□□ -0.91
HTT-208ENST00000510626 ALG1Q9BT22 464 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 IMPG2Q9BZV3 1241 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 ZSWIM4Q9H7M6 989 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 TRHP20396 242 aaPredicted RBP9.36□□□□□ -0.91
HTT-208ENST00000510626 PDCD2Q16342 344 aaPredicted RBP9.36□□□□□ -0.91
HTT-208ENST00000510626 NAA16Q6N069 864 aaPredicted RBP9.36□□□□□ -0.91
HTT-208ENST00000510626 APBB1IPQ7Z5R6 666 aaPredicted RBP9.36□□□□□ -0.91
HTT-208ENST00000510626 RRP36Q96EU6 259 aaKnown RBP9.36□□□□□ -0.91
HTT-208ENST00000510626 PSMD1Q99460 953 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 RAB17Q9H0T7 212 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 MRGBPQ9NV56 204 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 GTF3C6Q969F1 213 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 TUBB6Q9BUF5 446 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 KLHL14Q9P2G3 628 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
HTT-208ENST00000510626 CUTAO60888 179 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 SEMA3FQ13275 785 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 BANK1Q8NDB2 785 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 IFT140Q96RY7 1462 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 NUTM2FA1L443 756 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 NUTM2GQ5VZR2 741 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 GSTA5Q7RTV2 222 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 FBXO41Q8TF61 875 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 MIS12Q9H081 205 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 RANBP6O60518 1105 aaKnown RBP9.36□□□□□ -0.91
HTT-208ENST00000510626 ATP2B2Q01814 1243 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 HS2ST1Q7LGA3 356 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 ANKRD27Q96NW4 1050 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 HAUS8Q9BT25 410 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 SLC26A6Q9BXS9 759 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 TFIP11Q9UBB9 837 aaKnown RBP9.36□□□□□ -0.91
HTT-208ENST00000510626 FBXO3Q9UK99 471 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 PPP1R7Q15435 360 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 WTAPQ15007 396 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 SH3GL3Q99963 347 aa9.36□□□□□ -0.91
HTT-208ENST00000510626 NUTM2BA6NNL0 878 aaPredicted RBP9.35□□□□□ -0.91
HTT-208ENST00000510626 NUTM2EB1AL46 878 aaPredicted RBP9.35□□□□□ -0.91
HTT-208ENST00000510626 GNA14O95837 355 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 PLCG2P16885 1265 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 ELF2Q15723 593 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 PPP1R42Q7Z4L9 355 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 RASEFQ8IZ41 740 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 MRFAP1L1Q96HT8 127 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 B4DLN1 442 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 MRPL12P52815 198 aaKnown RBP9.35□□□□□ -0.91
HTT-208ENST00000510626 CRNKL1Q9BZJ0 848 aaKnown RBP9.35□□□□□ -0.91
HTT-208ENST00000510626 BICD1Q96G01 975 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 CABS1Q96KC9 395 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 GUCA1BQ9UMX6 200 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 STK10O94804 968 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms