RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 ANKRD45Q5TZF3 282 aa19.02■□□□□ 0.64
CPNE1-228ENST00000498814 SPTY2D1Q68D10 685 aaPredicted RBP19.02■□□□□ 0.64
CPNE1-228ENST00000498814 SNRKQ9NRH2 765 aa19.02■□□□□ 0.64
CPNE1-228ENST00000498814 MYH2Q9UKX2 1941 aa19.02■□□□□ 0.63
CPNE1-228ENST00000498814 CRKP46108 304 aa19.01■□□□□ 0.63
CPNE1-228ENST00000498814 NBPF9Q3BBW0 867 aa19.01■□□□□ 0.63
CPNE1-228ENST00000498814 CFAP100Q494V2 611 aa19.01■□□□□ 0.63
CPNE1-228ENST00000498814 ZBTB47Q9UFB7 747 aaPredicted RBP19.01■□□□□ 0.63
CPNE1-228ENST00000498814 ABCF2Q9UG63 623 aa19.01■□□□□ 0.63
CPNE1-228ENST00000498814 ATP5JP18859 108 aa19■□□□□ 0.63
CPNE1-228ENST00000498814 ZAP70P43403 619 aa19■□□□□ 0.63
CPNE1-228ENST00000498814 C1QTNF8P60827 252 aa19■□□□□ 0.63
CPNE1-228ENST00000498814 MAP1SQ66K74 1059 aaPredicted RBP19■□□□□ 0.63
CPNE1-228ENST00000498814 HHIPL2Q6UWX4 724 aa19■□□□□ 0.63
CPNE1-228ENST00000498814 CNTROBQ8N137 903 aa19■□□□□ 0.63
CPNE1-228ENST00000498814 TEKT1Q969V4 418 aa19■□□□□ 0.63
CPNE1-228ENST00000498814 SPDYE2BA6NHP3 402 aa18.99■□□□□ 0.63
CPNE1-228ENST00000498814 IGSF3O75054 1194 aa18.99■□□□□ 0.63
CPNE1-228ENST00000498814 ITGBL1O95965 494 aaPredicted RBP18.99■□□□□ 0.63
CPNE1-228ENST00000498814 CYP2E1P05181 493 aaPredicted RBP18.99■□□□□ 0.63
CPNE1-228ENST00000498814 SPDYE6P0CI01 402 aa18.99■□□□□ 0.63
CPNE1-228ENST00000498814 RBM5P52756 815 aaKnown RBP eCLIP18.99■□□□□ 0.63
CPNE1-228ENST00000498814 TBC1D9Q6ZT07 1266 aa18.99■□□□□ 0.63
CPNE1-228ENST00000498814 ERICH6Q7L0X2 663 aa18.99■□□□□ 0.63
CPNE1-228ENST00000498814 DCPSQ96C86 337 aaKnown RBP18.99■□□□□ 0.63
CPNE1-228ENST00000498814 PRMT6Q96LA8 375 aaPredicted RBP18.99■□□□□ 0.63
CPNE1-228ENST00000498814 ECHDC1Q9NTX5 307 aa18.99■□□□□ 0.63
CPNE1-228ENST00000498814 PCDHAC2Q9Y5I4 1007 aa18.99■□□□□ 0.63
CPNE1-228ENST00000498814 DOCK2Q92608 1830 aa18.99■□□□□ 0.63
CPNE1-228ENST00000498814 ASTN2O75129 1339 aaPredicted RBP18.99■□□□□ 0.63
CPNE1-228ENST00000498814 PITPNM2Q9BZ72 1349 aa18.99■□□□□ 0.63
CPNE1-228ENST00000498814 NEFLP07196 543 aa18.98■□□□□ 0.63
CPNE1-228ENST00000498814 ANGEL2Q5VTE6 544 aaKnown RBP18.98■□□□□ 0.63
CPNE1-228ENST00000498814 GPATCH3Q96I76 525 aa18.98■□□□□ 0.63
CPNE1-228ENST00000498814 ZDHHC15Q96MV8 337 aa18.98■□□□□ 0.63
CPNE1-228ENST00000498814 GGA3Q9NZ52 723 aa18.98■□□□□ 0.63
CPNE1-228ENST00000498814 MAST2Q6P0Q8 1798 aa18.98■□□□□ 0.63
CPNE1-228ENST00000498814 TRPM7Q96QT4 1865 aa18.97■□□□□ 0.63
CPNE1-228ENST00000498814 MYO1BO43795 1136 aa18.97■□□□□ 0.63
CPNE1-228ENST00000498814 NUCB1Q02818 461 aa18.97■□□□□ 0.63
CPNE1-228ENST00000498814 CDC37L1Q7L3B6 337 aa18.97■□□□□ 0.63
CPNE1-228ENST00000498814 DZIP1Q86YF9 867 aaKnown RBP18.97■□□□□ 0.63
CPNE1-228ENST00000498814 SLF2Q8IX21 1173 aa18.97■□□□□ 0.63
CPNE1-228ENST00000498814 LRP2BPQ9P2M1 347 aa18.97■□□□□ 0.63
CPNE1-228ENST00000498814 MECOMQ03112 1051 aa18.96■□□□□ 0.63
CPNE1-228ENST00000498814 DIXDC1Q155Q3 683 aa18.96■□□□□ 0.63
CPNE1-228ENST00000498814 B4GALNT3Q6L9W6 998 aa18.96■□□□□ 0.63
CPNE1-228ENST00000498814 FAM163AQ96GL9 167 aaPredicted RBP18.96■□□□□ 0.63
CPNE1-228ENST00000498814 HAUS7Q99871 368 aa18.96■□□□□ 0.63
CPNE1-228ENST00000498814 PIH1D3Q9NQM4 214 aaKnown RBP18.96■□□□□ 0.63
CPNE1-228ENST00000498814 TTC41PQ6P2S7 1318 aa18.96■□□□□ 0.63
CPNE1-228ENST00000498814 PASKQ96RG2 1323 aa18.96■□□□□ 0.63
CPNE1-228ENST00000498814 SALL3Q9BXA9 1300 aa18.96■□□□□ 0.63
CPNE1-228ENST00000498814 GSTO1P78417 241 aa18.95■□□□□ 0.62
CPNE1-228ENST00000498814 TTF1Q15361 905 aaPredicted RBP18.95■□□□□ 0.62
CPNE1-228ENST00000498814 APOBEC3HQ6NTF7 200 aaKnown RBP18.95■□□□□ 0.62
CPNE1-228ENST00000498814 KRT26Q7Z3Y9 468 aa18.95■□□□□ 0.62
CPNE1-228ENST00000498814 CHD1LQ86WJ1 897 aa18.95■□□□□ 0.62
CPNE1-228ENST00000498814 SULF1Q8IWU6 871 aa18.95■□□□□ 0.62
CPNE1-228ENST00000498814 OTUD7AQ8TE49 926 aaPredicted RBP18.95■□□□□ 0.62
CPNE1-228ENST00000498814 ZNF384Q8TF68 577 aa18.95■□□□□ 0.62
CPNE1-228ENST00000498814 NSUN4Q96CB9 384 aaKnown RBP18.95■□□□□ 0.62
CPNE1-228ENST00000498814 GLIS2Q9BZE0 524 aaPredicted RBP18.95■□□□□ 0.62
CPNE1-228ENST00000498814 BOLA2Q9H3K6 86 aa18.95■□□□□ 0.62
CPNE1-228ENST00000498814 RAI14Q9P0K7 980 aa18.95■□□□□ 0.62
CPNE1-228ENST00000498814 DAGLAQ9Y4D2 1042 aa18.95■□□□□ 0.62
CPNE1-228ENST00000498814 NDUFB9Q9Y6M9 179 aa18.95■□□□□ 0.62
CPNE1-228ENST00000498814 GAKO14976 1311 aa18.95■□□□□ 0.62
CPNE1-228ENST00000498814 LDHCP07864 332 aa18.94■□□□□ 0.62
CPNE1-228ENST00000498814 MX1P20591 662 aa18.94■□□□□ 0.62
CPNE1-228ENST00000498814 SPDYE2Q495Y8 402 aa18.94■□□□□ 0.62
CPNE1-228ENST00000498814 USP48Q86UV5 1035 aa18.94■□□□□ 0.62
CPNE1-228ENST00000498814 APOBEC3FQ8IUX4 373 aaKnown RBP18.94■□□□□ 0.62
CPNE1-228ENST00000498814 DNAJC2Q99543 621 aaKnown RBP18.94■□□□□ 0.62
CPNE1-228ENST00000498814 LNPKQ9C0E8 428 aa18.94■□□□□ 0.62
CPNE1-228ENST00000498814 ANTXR1Q9H6X2 564 aa18.94■□□□□ 0.62
CPNE1-228ENST00000498814 TDRD3Q9H7E2 651 aaKnown RBP18.94■□□□□ 0.62
CPNE1-228ENST00000498814 AOX1Q06278 1338 aa18.94■□□□□ 0.62
CPNE1-228ENST00000498814 ERC2O15083 957 aa18.93■□□□□ 0.62
CPNE1-228ENST00000498814 TMED8Q6PL24 325 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-228ENST00000498814 PAG1Q9NWQ8 432 aa18.93■□□□□ 0.62
CPNE1-228ENST00000498814 ZNF70Q9UC06 446 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-228ENST00000498814 STAP2Q9UGK3 403 aa18.93■□□□□ 0.62
CPNE1-228ENST00000498814 MYH7P12883 1935 aa18.93■□□□□ 0.62
CPNE1-228ENST00000498814 MROH7-TTC4A0A0A0MT08 1334 aa18.93■□□□□ 0.62
CPNE1-228ENST00000498814 CLRN2A0PK11 232 aa18.92■□□□□ 0.62
CPNE1-228ENST00000498814 GOLIM4O00461 696 aa18.92■□□□□ 0.62
CPNE1-228ENST00000498814 TRAF5O00463 557 aa18.92■□□□□ 0.62
CPNE1-228ENST00000498814 IDH1O75874 414 aaKnown RBP18.92■□□□□ 0.62
CPNE1-228ENST00000498814 MAP3K12Q12852 859 aa18.92■□□□□ 0.62
CPNE1-228ENST00000498814 GPR75-ASB3A0A0A6YYF3 556 aa18.91■□□□□ 0.62
CPNE1-228ENST00000498814 ADM5C9JUS6 153 aa18.91■□□□□ 0.62
CPNE1-228ENST00000498814 GLRX3O76003 335 aaKnown RBP18.91■□□□□ 0.62
CPNE1-228ENST00000498814 TSHZ3Q63HK5 1081 aa18.91■□□□□ 0.62
CPNE1-228ENST00000498814 NAA16Q6N069 864 aaPredicted RBP18.91■□□□□ 0.62
CPNE1-228ENST00000498814 PI4K2BQ8TCG2 481 aa18.91■□□□□ 0.62
CPNE1-228ENST00000498814 APLP1P51693 650 aa18.9■□□□□ 0.62
CPNE1-228ENST00000498814 PDE1AP54750 535 aa18.9■□□□□ 0.62
CPNE1-228ENST00000498814 FKBP1CQ5VVH2 108 aa18.9■□□□□ 0.62
CPNE1-228ENST00000498814 ERICH6BQ5W0A0 696 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms