RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 PRMT6Q96LA8 375 aaPredicted RBP16.59■□□□□ 0.25
COL1A1-208ENST00000494334 GLIS2Q9BZE0 524 aaPredicted RBP16.59■□□□□ 0.25
COL1A1-208ENST00000494334 SNRKQ9NRH2 765 aa16.59■□□□□ 0.25
COL1A1-208ENST00000494334 GGA3Q9NZ52 723 aa16.59■□□□□ 0.25
COL1A1-208ENST00000494334 ABCF2Q9UG63 623 aa16.59■□□□□ 0.25
COL1A1-208ENST00000494334 PASKQ96RG2 1323 aa16.59■□□□□ 0.25
COL1A1-208ENST00000494334 SPDYE2BA6NHP3 402 aa16.58■□□□□ 0.24
COL1A1-208ENST00000494334 IGHDP01880 384 aa16.58■□□□□ 0.24
COL1A1-208ENST00000494334 LDHBP07195 334 aaKnown RBP16.58■□□□□ 0.24
COL1A1-208ENST00000494334 SPDYE6P0CI01 402 aa16.58■□□□□ 0.24
COL1A1-208ENST00000494334 FMR1Q06787 632 aaKnown RBP eCLIP16.58■□□□□ 0.24
COL1A1-208ENST00000494334 TBC1D9Q6ZT07 1266 aa16.58■□□□□ 0.24
COL1A1-208ENST00000494334 USP48Q86UV5 1035 aa16.58■□□□□ 0.24
COL1A1-208ENST00000494334 GCC1Q96CN9 775 aa16.58■□□□□ 0.24
COL1A1-208ENST00000494334 RWDD1Q9H446 243 aaPredicted RBP16.58■□□□□ 0.24
COL1A1-208ENST00000494334 MAST3O60307 1309 aa16.57■□□□□ 0.24
COL1A1-208ENST00000494334 AOX1Q06278 1338 aa16.57■□□□□ 0.24
COL1A1-208ENST00000494334 TRAF5O00463 557 aa16.57■□□□□ 0.24
COL1A1-208ENST00000494334 HSPA6P17066 643 aa16.57■□□□□ 0.24
COL1A1-208ENST00000494334 ZAP70P43403 619 aa16.57■□□□□ 0.24
COL1A1-208ENST00000494334 HHIPL2Q6UWX4 724 aa16.57■□□□□ 0.24
COL1A1-208ENST00000494334 KRT26Q7Z3Y9 468 aa16.57■□□□□ 0.24
COL1A1-208ENST00000494334 TEKT1Q969V4 418 aa16.57■□□□□ 0.24
COL1A1-208ENST00000494334 PITPNM2Q9BZ72 1349 aa16.56■□□□□ 0.24
COL1A1-208ENST00000494334 CYP2E1P05181 493 aaPredicted RBP16.56■□□□□ 0.24
COL1A1-208ENST00000494334 APLP1P51693 650 aa16.56■□□□□ 0.24
COL1A1-208ENST00000494334 DIXDC1Q155Q3 683 aa16.56■□□□□ 0.24
COL1A1-208ENST00000494334 SPTY2D1Q68D10 685 aaPredicted RBP16.56■□□□□ 0.24
COL1A1-208ENST00000494334 DLK2Q6UY11 383 aa16.56■□□□□ 0.24
COL1A1-208ENST00000494334 ERICH6Q7L0X2 663 aa16.56■□□□□ 0.24
COL1A1-208ENST00000494334 SCAF8Q9UPN6 1271 aaKnown RBP16.56■□□□□ 0.24
COL1A1-208ENST00000494334 ADM5C9JUS6 153 aa16.55■□□□□ 0.24
COL1A1-208ENST00000494334 MYO1BO43795 1136 aa16.55■□□□□ 0.24
COL1A1-208ENST00000494334 APOBEC3HQ6NTF7 200 aaKnown RBP16.55■□□□□ 0.24
COL1A1-208ENST00000494334 SULF1Q8IWU6 871 aa16.55■□□□□ 0.24
COL1A1-208ENST00000494334 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.55■□□□□ 0.24
COL1A1-208ENST00000494334 ZDHHC15Q96MV8 337 aa16.55■□□□□ 0.24
COL1A1-208ENST00000494334 TDRD3Q9H7E2 651 aaKnown RBP16.55■□□□□ 0.24
COL1A1-208ENST00000494334 NDUFB9Q9Y6M9 179 aa16.55■□□□□ 0.24
COL1A1-208ENST00000494334 CLRN2A0PK11 232 aa16.54■□□□□ 0.24
COL1A1-208ENST00000494334 ANKRD45Q5TZF3 282 aa16.54■□□□□ 0.24
COL1A1-208ENST00000494334 SMC5Q8IY18 1101 aa16.54■□□□□ 0.24
COL1A1-208ENST00000494334 LRP2BPQ9P2M1 347 aa16.54■□□□□ 0.24
COL1A1-208ENST00000494334 DAGLAQ9Y4D2 1042 aa16.54■□□□□ 0.24
COL1A1-208ENST00000494334 MYH13Q9UKX3 1938 aa16.53■□□□□ 0.24
COL1A1-208ENST00000494334 CENPBP07199 599 aaPredicted RBP16.53■□□□□ 0.24
COL1A1-208ENST00000494334 ATP5JP18859 108 aa16.53■□□□□ 0.24
COL1A1-208ENST00000494334 MECOMQ03112 1051 aa16.53■□□□□ 0.24
COL1A1-208ENST00000494334 SPDYE2Q495Y8 402 aa16.53■□□□□ 0.24
COL1A1-208ENST00000494334 DZIP1Q86YF9 867 aaKnown RBP16.53■□□□□ 0.24
COL1A1-208ENST00000494334 ZNF384Q8TF68 577 aa16.53■□□□□ 0.24
COL1A1-208ENST00000494334 NSUN4Q96CB9 384 aaKnown RBP16.53■□□□□ 0.24
COL1A1-208ENST00000494334 ANTXR1Q9H6X2 564 aa16.53■□□□□ 0.24
COL1A1-208ENST00000494334 PIH1D3Q9NQM4 214 aaKnown RBP16.53■□□□□ 0.24
COL1A1-208ENST00000494334 RAI14Q9P0K7 980 aa16.53■□□□□ 0.24
COL1A1-208ENST00000494334 ZNF70Q9UC06 446 aaPredicted RBP16.53■□□□□ 0.24
COL1A1-208ENST00000494334 HTRA3P83110 453 aa16.52■□□□□ 0.24
COL1A1-208ENST00000494334 CST9Q5W186 159 aa16.52■□□□□ 0.24
COL1A1-208ENST00000494334 APOBEC3FQ8IUX4 373 aaKnown RBP16.52■□□□□ 0.24
COL1A1-208ENST00000494334 FAM163AQ96GL9 167 aaPredicted RBP16.52■□□□□ 0.24
COL1A1-208ENST00000494334 BOLA2Q9H3K6 86 aa16.52■□□□□ 0.24
COL1A1-208ENST00000494334 VEZTQ9HBM0 779 aa16.52■□□□□ 0.24
COL1A1-208ENST00000494334 GAKO14976 1311 aa16.51■□□□□ 0.23
COL1A1-208ENST00000494334 AKAP11Q9UKA4 1901 aa16.51■□□□□ 0.23
COL1A1-208ENST00000494334 TMEM88BA6NKF7 163 aa16.51■□□□□ 0.23
COL1A1-208ENST00000494334 CELF2O95319 508 aaKnown RBP16.51■□□□□ 0.23
COL1A1-208ENST00000494334 B4GALNT3Q6L9W6 998 aa16.51■□□□□ 0.23
COL1A1-208ENST00000494334 SLF2Q8IX21 1173 aa16.51■□□□□ 0.23
COL1A1-208ENST00000494334 OTUD7AQ8TE49 926 aaPredicted RBP16.51■□□□□ 0.23
COL1A1-208ENST00000494334 ECHDC1Q9NTX5 307 aa16.51■□□□□ 0.23
COL1A1-208ENST00000494334 ZBTB47Q9UFB7 747 aaPredicted RBP16.51■□□□□ 0.23
COL1A1-208ENST00000494334 IGSF3O75054 1194 aa16.5■□□□□ 0.23
COL1A1-208ENST00000494334 PRAMEF18Q5VWM3 479 aa16.5■□□□□ 0.23
COL1A1-208ENST00000494334 CDCA5Q96FF9 252 aa16.5■□□□□ 0.23
COL1A1-208ENST00000494334 DNAJC2Q99543 621 aaKnown RBP16.5■□□□□ 0.23
COL1A1-208ENST00000494334 DEFB129Q9H1M3 183 aa16.5■□□□□ 0.23
COL1A1-208ENST00000494334 ZNF408Q9H9D4 720 aa16.5■□□□□ 0.23
COL1A1-208ENST00000494334 CREBZFQ9NS37 354 aa16.5■□□□□ 0.23
COL1A1-208ENST00000494334 POLR2AP24928 1970 aaKnown RBP16.49■□□□□ 0.23
COL1A1-208ENST00000494334 MROH7-TTC4A0A0A0MT08 1334 aa16.49■□□□□ 0.23
COL1A1-208ENST00000494334 GOLIM4O00461 696 aa16.49■□□□□ 0.23
COL1A1-208ENST00000494334 IDH1O75874 414 aaKnown RBP16.49■□□□□ 0.23
COL1A1-208ENST00000494334 LDHCP07864 332 aa16.49■□□□□ 0.23
COL1A1-208ENST00000494334 GSTO1P78417 241 aa16.49■□□□□ 0.23
COL1A1-208ENST00000494334 TSHZ3Q63HK5 1081 aa16.49■□□□□ 0.23
COL1A1-208ENST00000494334 CDC42EP5Q6NZY7 148 aa16.49■□□□□ 0.23
COL1A1-208ENST00000494334 EDC3Q96F86 508 aaKnown RBP16.49■□□□□ 0.23
COL1A1-208ENST00000494334 HAUS7Q99871 368 aa16.49■□□□□ 0.23
COL1A1-208ENST00000494334 SALL3Q9BXA9 1300 aa16.48■□□□□ 0.23
COL1A1-208ENST00000494334 GPR75-ASB3A0A0A6YYF3 556 aa16.48■□□□□ 0.23
COL1A1-208ENST00000494334 TCP10L2B9ZVM9 353 aa16.48■□□□□ 0.23
COL1A1-208ENST00000494334 BTDP43251 543 aa16.48■□□□□ 0.23
COL1A1-208ENST00000494334 CACNB3P54284 484 aa16.48■□□□□ 0.23
COL1A1-208ENST00000494334 TNFAIP1Q13829 316 aa16.48■□□□□ 0.23
COL1A1-208ENST00000494334 RASA3Q14644 834 aa16.48■□□□□ 0.23
COL1A1-208ENST00000494334 TTF1Q15361 905 aaPredicted RBP16.48■□□□□ 0.23
COL1A1-208ENST00000494334 NAA16Q6N069 864 aaPredicted RBP16.48■□□□□ 0.23
COL1A1-208ENST00000494334 GPATCH3Q96I76 525 aa16.48■□□□□ 0.23
COL1A1-208ENST00000494334 LNPKQ9C0E8 428 aa16.48■□□□□ 0.23
COL1A1-208ENST00000494334 USP40Q9NVE5 1235 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms