RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 ABCF2Q9UG63 623 aa11.36□□□□□ -0.59
CSTF1-206ENST00000493039 SBF1O95248 1867 aa11.36□□□□□ -0.59
CSTF1-206ENST00000493039 ZNF541Q9H0D2 1346 aa11.36□□□□□ -0.59
CSTF1-206ENST00000493039 RNF181Q9P0P0 153 aa11.36□□□□□ -0.59
CSTF1-206ENST00000493039 ZBTB12Q9Y330 459 aaPredicted RBP11.36□□□□□ -0.59
CSTF1-206ENST00000493039 ZNF646O15015 1829 aaPredicted RBP11.35□□□□□ -0.59
CSTF1-206ENST00000493039 IL25Q9H293 177 aa11.35□□□□□ -0.59
CSTF1-206ENST00000493039 TCRBV5S4A2TA0A5A2 114 aa11.35□□□□□ -0.59
CSTF1-206ENST00000493039 IDH1O75874 414 aaKnown RBP11.35□□□□□ -0.59
CSTF1-206ENST00000493039 ADGRA1Q86SQ6 560 aa11.35□□□□□ -0.59
CSTF1-206ENST00000493039 TEX2Q8IWB9 1127 aa11.35□□□□□ -0.59
CSTF1-206ENST00000493039 CNTROBQ8N137 903 aa11.35□□□□□ -0.59
CSTF1-206ENST00000493039 FBXW7Q969H0 707 aa11.35□□□□□ -0.59
CSTF1-206ENST00000493039 NSUN4Q96CB9 384 aaKnown RBP11.35□□□□□ -0.59
CSTF1-206ENST00000493039 FKBP1AP62942 108 aaKnown RBP11.34□□□□□ -0.59
CSTF1-206ENST00000493039 MECOMQ03112 1051 aa11.34□□□□□ -0.59
CSTF1-206ENST00000493039 TTF1Q15361 905 aaPredicted RBP11.34□□□□□ -0.59
CSTF1-206ENST00000493039 TBC1D22AQ8WUA7 517 aa11.34□□□□□ -0.59
CSTF1-206ENST00000493039 LRP2BPQ9P2M1 347 aa11.34□□□□□ -0.59
CSTF1-206ENST00000493039 CCDC88AQ3V6T2 1871 aa11.34□□□□□ -0.59
CSTF1-206ENST00000493039 MYO5AQ9Y4I1 1855 aaKnown RBP11.34□□□□□ -0.59
CSTF1-206ENST00000493039 PDE6AP16499 860 aa11.33□□□□□ -0.59
CSTF1-206ENST00000493039 CHMLP26374 656 aa11.33□□□□□ -0.59
CSTF1-206ENST00000493039 DIXDC1Q155Q3 683 aa11.33□□□□□ -0.59
CSTF1-206ENST00000493039 SLC9C2Q5TAH2 1124 aa11.33□□□□□ -0.59
CSTF1-206ENST00000493039 CIAPIN1Q6FI81 312 aa11.33□□□□□ -0.59
CSTF1-206ENST00000493039 RSBN1LQ6PCB5 846 aaPredicted RBP11.33□□□□□ -0.59
CSTF1-206ENST00000493039 IPO4Q8TEX9 1081 aaKnown RBP11.33□□□□□ -0.59
CSTF1-206ENST00000493039 FAM227BQ96M60 508 aa11.33□□□□□ -0.59
CSTF1-206ENST00000493039 FSD1Q9BTV5 496 aa11.33□□□□□ -0.59
CSTF1-206ENST00000493039 SHTN1A0MZ66 631 aa11.33□□□□□ -0.6
CSTF1-206ENST00000493039 LDHBP07195 334 aaKnown RBP11.33□□□□□ -0.6
CSTF1-206ENST00000493039 ADD2P35612 726 aa11.33□□□□□ -0.6
CSTF1-206ENST00000493039 KIAA0825Q8IV33 1275 aa11.33□□□□□ -0.6
CSTF1-206ENST00000493039 OSBP2Q969R2 916 aa11.33□□□□□ -0.6
CSTF1-206ENST00000493039 SEC62Q99442 399 aaKnown RBP11.33□□□□□ -0.6
CSTF1-206ENST00000493039 RAI14Q9P0K7 980 aa11.33□□□□□ -0.6
CSTF1-206ENST00000493039 A0A0D9SFI3 127 aa11.32□□□□□ -0.6
CSTF1-206ENST00000493039 F8W031 263 aaPredicted RBP11.32□□□□□ -0.6
CSTF1-206ENST00000493039 RNF113AO15541 343 aaKnown RBP11.32□□□□□ -0.6
CSTF1-206ENST00000493039 NCLP19338 710 aaKnown RBP11.32□□□□□ -0.6
CSTF1-206ENST00000493039 MAGEB6Q8N7X4 407 aa11.32□□□□□ -0.6
CSTF1-206ENST00000493039 PCDHAC2Q9Y5I4 1007 aa11.32□□□□□ -0.6
CSTF1-206ENST00000493039 ZNF532Q9HCE3 1301 aa11.32□□□□□ -0.6
CSTF1-206ENST00000493039 DDNO94850 711 aaPredicted RBP11.32□□□□□ -0.6
CSTF1-206ENST00000493039 EIF6P56537 245 aaKnown RBP11.32□□□□□ -0.6
CSTF1-206ENST00000493039 MAP3K12Q12852 859 aa11.32□□□□□ -0.6
CSTF1-206ENST00000493039 UBE3CQ15386 1083 aa11.32□□□□□ -0.6
CSTF1-206ENST00000493039 C8orf34Q49A92 452 aa11.32□□□□□ -0.6
CSTF1-206ENST00000493039 ZMYM1Q5SVZ6 1142 aa11.32□□□□□ -0.6
CSTF1-206ENST00000493039 ZGPATQ8N5A5 531 aaKnown RBP11.32□□□□□ -0.6
CSTF1-206ENST00000493039 PUS7LQ9H0K6 701 aaKnown RBP11.32□□□□□ -0.6
CSTF1-206ENST00000493039 TTF2Q9UNY4 1162 aaKnown RBP11.32□□□□□ -0.6
CSTF1-206ENST00000493039 SUGT1Q9Y2Z0 365 aa11.32□□□□□ -0.6
CSTF1-206ENST00000493039 DICER1Q9UPY3 1922 aaKnown RBP11.31□□□□□ -0.6
CSTF1-206ENST00000493039 SCNN1DP51172 638 aa11.31□□□□□ -0.6
CSTF1-206ENST00000493039 NMIQ13287 307 aaPredicted RBP11.31□□□□□ -0.6
CSTF1-206ENST00000493039 TNIP1Q15025 636 aa11.31□□□□□ -0.6
CSTF1-206ENST00000493039 SPTY2D1Q68D10 685 aaPredicted RBP11.31□□□□□ -0.6
CSTF1-206ENST00000493039 AGBL3Q8NEM8 1001 aa11.31□□□□□ -0.6
CSTF1-206ENST00000493039 FAM163AQ96GL9 167 aaPredicted RBP11.31□□□□□ -0.6
CSTF1-206ENST00000493039 GMPSP49915 693 aaPredicted RBP11.31□□□□□ -0.6
CSTF1-206ENST00000493039 CWC27Q6UX04 472 aaKnown RBP11.31□□□□□ -0.6
CSTF1-206ENST00000493039 GPC2Q8N158 579 aa11.31□□□□□ -0.6
CSTF1-206ENST00000493039 ZNF592Q92610 1267 aa11.31□□□□□ -0.6
CSTF1-206ENST00000493039 GJA3Q9Y6H8 435 aa11.31□□□□□ -0.6
CSTF1-206ENST00000493039 DOCK2Q92608 1830 aa11.31□□□□□ -0.6
CSTF1-206ENST00000493039 MYH13Q9UKX3 1938 aa11.3□□□□□ -0.6
CSTF1-206ENST00000493039 RFX7Q2KHR2 1363 aa11.3□□□□□ -0.6
CSTF1-206ENST00000493039 PSME4Q14997 1843 aa11.3□□□□□ -0.6
CSTF1-206ENST00000493039 CDC45O75419 566 aa11.3□□□□□ -0.6
CSTF1-206ENST00000493039 SEC24BO95487 1268 aa11.3□□□□□ -0.6
CSTF1-206ENST00000493039 EGFRP00533 1210 aa11.3□□□□□ -0.6
CSTF1-206ENST00000493039 CYP7A1P22680 504 aa11.3□□□□□ -0.6
CSTF1-206ENST00000493039 NAA16Q6N069 864 aaPredicted RBP11.3□□□□□ -0.6
CSTF1-206ENST00000493039 ZNF589Q86UQ0 364 aaPredicted RBP11.3□□□□□ -0.6
CSTF1-206ENST00000493039 MRIQ9BWK5 157 aa11.3□□□□□ -0.6
CSTF1-206ENST00000493039 M0R2C6 588 aa11.29□□□□□ -0.6
CSTF1-206ENST00000493039 ZFYP08048 801 aaPredicted RBP11.29□□□□□ -0.6
CSTF1-206ENST00000493039 APOBEC3HQ6NTF7 200 aaKnown RBP11.29□□□□□ -0.6
CSTF1-206ENST00000493039 CCDC129Q6ZRS4 1044 aa11.29□□□□□ -0.6
CSTF1-206ENST00000493039 DZIP1Q86YF9 867 aaKnown RBP11.29□□□□□ -0.6
CSTF1-206ENST00000493039 APPBP2Q92624 585 aa11.29□□□□□ -0.6
CSTF1-206ENST00000493039 DPF2Q92785 391 aa11.29□□□□□ -0.6
CSTF1-206ENST00000493039 RIOK1Q9BRS2 568 aaKnown RBP11.29□□□□□ -0.6
CSTF1-206ENST00000493039 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.29□□□□□ -0.6
CSTF1-206ENST00000493039 DAGLAQ9Y4D2 1042 aa11.29□□□□□ -0.6
CSTF1-206ENST00000493039 GAKO14976 1311 aa11.29□□□□□ -0.6
CSTF1-206ENST00000493039 MYO3BQ8WXR4 1341 aa11.29□□□□□ -0.6
CSTF1-206ENST00000493039 FOXP2O15409 715 aa11.29□□□□□ -0.6
CSTF1-206ENST00000493039 USP17L8P0C7I0 530 aa11.29□□□□□ -0.6
CSTF1-206ENST00000493039 ZNF280AP59817 542 aaPredicted RBP11.29□□□□□ -0.6
CSTF1-206ENST00000493039 MIGA1Q8NAN2 632 aa11.29□□□□□ -0.6
CSTF1-206ENST00000493039 MAST3O60307 1309 aa11.29□□□□□ -0.6
CSTF1-206ENST00000493039 GPR75-ASB3A0A0A6YYF3 556 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 SGSM2O43147 1006 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 RPS12P25398 132 aaKnown RBP11.28□□□□□ -0.6
CSTF1-206ENST00000493039 CRKP46108 304 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 DYNLL1P63167 89 aaKnown RBP11.28□□□□□ -0.6
CSTF1-206ENST00000493039 HDLBPQ00341 1268 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms