RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, human

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC3-223	ENST00000492275	SPDYE2B	A6NHP3	402 aa		31.68	■■■□□ 2.66
TTC3-223	ENST00000492275	ADM5	C9JUS6	153 aa		31.68	■■■□□ 2.66
TTC3-223	ENST00000492275	SPDYE6	P0CI01	402 aa		31.68	■■■□□ 2.66
TTC3-223	ENST00000492275	PRDX5	P30044	214 aa		31.68	■■■□□ 2.66
TTC3-223	ENST00000492275	CRK	P46108	304 aa		31.68	■■■□□ 2.66
TTC3-223	ENST00000492275	HDLBP	Q00341	1268 aa	Known RBP	31.68	■■■□□ 2.66
TTC3-223	ENST00000492275	TTC39A	Q5SRH9	613 aa		31.68	■■■□□ 2.66
TTC3-223	ENST00000492275	CLASRP	Q8N2M8	674 aa	Known RBP	31.68	■■■□□ 2.66
TTC3-223	ENST00000492275	SPATA5	Q8NB90	893 aa		31.68	■■■□□ 2.66
TTC3-223	ENST00000492275	MRI	Q9BWK5	157 aa		31.68	■■■□□ 2.66
TTC3-223	ENST00000492275	SCAF8	Q9UPN6	1271 aa	Known RBP	31.68	■■■□□ 2.66
TTC3-223	ENST00000492275	AOX1	Q06278	1338 aa		31.68	■■■□□ 2.66
TTC3-223	ENST00000492275	PITPNM2	Q9BZ72	1349 aa		31.68	■■■□□ 2.66
TTC3-223	ENST00000492275	RBM5	P52756	815 aa	Known RBP eCLIP	31.67	■■■□□ 2.66	8e-6	■■□□□ 11.9
TTC3-223	ENST00000492275	AAMP	Q13685	434 aa		31.67	■■■□□ 2.66
TTC3-223	ENST00000492275	ZNF512B	Q96KM6	892 aa	Predicted RBP	31.67	■■■□□ 2.66
TTC3-223	ENST00000492275	SULF1	Q8IWU6	871 aa		31.66	■■■□□ 2.66
TTC3-223	ENST00000492275	CST9	Q5W186	159 aa		31.65	■■■□□ 2.66
TTC3-223	ENST00000492275	LDHB	P07195	334 aa	Known RBP	31.64	■■■□□ 2.66
TTC3-223	ENST00000492275	ZGPAT	Q8N5A5	531 aa	Known RBP	31.64	■■■□□ 2.66
TTC3-223	ENST00000492275	TEKT1	Q969V4	418 aa		31.64	■■■□□ 2.66
TTC3-223	ENST00000492275	LRRCC1	Q9C099	1032 aa		31.64	■■■□□ 2.66
TTC3-223	ENST00000492275	SNRK	Q9NRH2	765 aa		31.64	■■■□□ 2.66
TTC3-223	ENST00000492275	MAST3	O60307	1309 aa		31.64	■■■□□ 2.66
TTC3-223	ENST00000492275	TMEM88B	A6NKF7	163 aa		31.63	■■■□□ 2.65
TTC3-223	ENST00000492275	SMARCA5	O60264	1052 aa	Predicted RBP	31.63	■■■□□ 2.65
TTC3-223	ENST00000492275	TBC1D9	Q6ZT07	1266 aa		31.63	■■■□□ 2.65
TTC3-223	ENST00000492275	BCL11A	Q9H165	835 aa		31.63	■■■□□ 2.65
TTC3-223	ENST00000492275	CREBZF	Q9NS37	354 aa		31.63	■■■□□ 2.65
TTC3-223	ENST00000492275	ABCF2	Q9UG63	623 aa		31.63	■■■□□ 2.65
TTC3-223	ENST00000492275	MYH2	Q9UKX2	1941 aa		31.63	■■■□□ 2.65
TTC3-223	ENST00000492275	IRX6	P78412	446 aa	Predicted RBP	31.62	■■■□□ 2.65
TTC3-223	ENST00000492275	HHIPL2	Q6UWX4	724 aa		31.62	■■■□□ 2.65
TTC3-223	ENST00000492275	ZDHHC15	Q96MV8	337 aa		31.62	■■■□□ 2.65
TTC3-223	ENST00000492275	MYO5A	Q9Y4I1	1855 aa	Known RBP	31.62	■■■□□ 2.65
TTC3-223	ENST00000492275	CLRN2	A0PK11	232 aa		31.61	■■■□□ 2.65
TTC3-223	ENST00000492275	IFIT2	P09913	472 aa	Known RBP	31.61	■■■□□ 2.65
TTC3-223	ENST00000492275	TDRD3	Q9H7E2	651 aa	Known RBP	31.61	■■■□□ 2.65
TTC3-223	ENST00000492275	MYO1B	O43795	1136 aa		31.6	■■■□□ 2.65
TTC3-223	ENST00000492275	HDAC1	Q13547	482 aa	Predicted RBP	31.6	■■■□□ 2.65
TTC3-223	ENST00000492275	DIXDC1	Q155Q3	683 aa		31.6	■■■□□ 2.65
TTC3-223	ENST00000492275	CELF2	O95319	508 aa	Known RBP	31.59	■■■□□ 2.65
TTC3-223	ENST00000492275	SPTY2D1	Q68D10	685 aa	Predicted RBP	31.59	■■■□□ 2.65
TTC3-223	ENST00000492275	APOBEC3H	Q6NTF7	200 aa	Known RBP	31.59	■■■□□ 2.65
TTC3-223	ENST00000492275	APOBEC3F	Q8IUX4	373 aa	Known RBP	31.59	■■■□□ 2.65
TTC3-223	ENST00000492275	ZNF70	Q9UC06	446 aa	Predicted RBP	31.59	■■■□□ 2.65
TTC3-223	ENST00000492275	CYP2E1	P05181	493 aa	Predicted RBP	31.58	■■■□□ 2.65
TTC3-223	ENST00000492275	ZAP70	P43403	619 aa		31.58	■■■□□ 2.65
TTC3-223	ENST00000492275	SPDYE2	Q495Y8	402 aa		31.58	■■■□□ 2.65
TTC3-223	ENST00000492275	CDCA5	Q96FF9	252 aa		31.58	■■■□□ 2.65
TTC3-223	ENST00000492275	ZNF408	Q9H9D4	720 aa		31.58	■■■□□ 2.65
TTC3-223	ENST00000492275	PRAMEF18	Q5VWM3	479 aa		31.57	■■■□□ 2.64
TTC3-223	ENST00000492275	ERICH6	Q7L0X2	663 aa		31.57	■■■□□ 2.64
TTC3-223	ENST00000492275	DNAJC5G	Q8N7S2	189 aa		31.57	■■■□□ 2.64
TTC3-223	ENST00000492275	ZNF384	Q8TF68	577 aa		31.57	■■■□□ 2.64
TTC3-223	ENST00000492275	DAGLA	Q9Y4D2	1042 aa		31.57	■■■□□ 2.64
TTC3-223	ENST00000492275	MECOM	Q03112	1051 aa		31.55	■■■□□ 2.64
TTC3-223	ENST00000492275	VEZT	Q9HBM0	779 aa		31.55	■■■□□ 2.64
TTC3-223	ENST00000492275	NDUFB9	Q9Y6M9	179 aa		31.55	■■■□□ 2.64
TTC3-223	ENST00000492275	DZIP1	Q86YF9	867 aa	Known RBP	31.54	■■■□□ 2.64
TTC3-223	ENST00000492275	DEFB129	Q9H1M3	183 aa		31.54	■■■□□ 2.64
TTC3-223	ENST00000492275	FAM163A	Q96GL9	167 aa	Predicted RBP	31.53	■■■□□ 2.64
TTC3-223	ENST00000492275	PIH1D3	Q9NQM4	214 aa	Known RBP	31.53	■■■□□ 2.64
TTC3-223	ENST00000492275	LRP2BP	Q9P2M1	347 aa		31.53	■■■□□ 2.64
TTC3-223	ENST00000492275	GAK	O14976	1311 aa		31.52	■■■□□ 2.64
TTC3-223	ENST00000492275	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	31.52	■■■□□ 2.64
TTC3-223	ENST00000492275	NSUN4	Q96CB9	384 aa	Known RBP	31.52	■■■□□ 2.64
TTC3-223	ENST00000492275	RAI14	Q9P0K7	980 aa		31.52	■■■□□ 2.64
TTC3-223	ENST00000492275	IGHD	P01880	384 aa		31.51	■■■□□ 2.63
TTC3-223	ENST00000492275	CACNB3	P54284	484 aa		31.5	■■■□□ 2.63
TTC3-223	ENST00000492275	GCC1	Q96CN9	775 aa		31.5	■■■□□ 2.63
TTC3-223	ENST00000492275	ANTXR1	Q9H6X2	564 aa		31.5	■■■□□ 2.63
TTC3-223	ENST00000492275	ABT1	Q9ULW3	272 aa	Known RBP	31.5	■■■□□ 2.63
TTC3-223	ENST00000492275	TLL2	Q9Y6L7	1015 aa		31.5	■■■□□ 2.63
TTC3-223	ENST00000492275	TCP10L2	B9ZVM9	353 aa		31.49	■■■□□ 2.63
TTC3-223	ENST00000492275	ATP5J	P18859	108 aa		31.49	■■■□□ 2.63
TTC3-223	ENST00000492275	RASA3	Q14644	834 aa		31.49	■■■□□ 2.63
TTC3-223	ENST00000492275	CDC42EP5	Q6NZY7	148 aa		31.49	■■■□□ 2.63
TTC3-223	ENST00000492275	SLF2	Q8IX21	1173 aa		31.49	■■■□□ 2.63
TTC3-223	ENST00000492275	RWDD1	Q9H446	243 aa	Predicted RBP	31.49	■■■□□ 2.63
TTC3-223	ENST00000492275	GBA2	Q9HCG7	927 aa	Predicted RBP	31.49	■■■□□ 2.63
TTC3-223	ENST00000492275	PPP2R3B	Q9Y5P8	575 aa		31.49	■■■□□ 2.63
TTC3-223	ENST00000492275	DOCK2	Q92608	1830 aa		31.48	■■■□□ 2.63
TTC3-223	ENST00000492275	SAPCD2	Q86UD0	394 aa		31.48	■■■□□ 2.63
TTC3-223	ENST00000492275	MKRN1	Q9UHC7	482 aa	Known RBP	31.48	■■■□□ 2.63
TTC3-223	ENST00000492275	MROH7-TTC4	A0A0A0MT08	1334 aa		31.48	■■■□□ 2.63
TTC3-223	ENST00000492275	BOLA2	Q9H3K6	86 aa		31.47	■■■□□ 2.63
TTC3-223	ENST00000492275	MAST2	Q6P0Q8	1798 aa		31.46	■■■□□ 2.63
TTC3-223	ENST00000492275	RASSF10	A6NK89	507 aa		31.46	■■■□□ 2.63
TTC3-223	ENST00000492275	GSTO1	P78417	241 aa		31.46	■■■□□ 2.63
TTC3-223	ENST00000492275	TNFAIP1	Q13829	316 aa		31.46	■■■□□ 2.63
TTC3-223	ENST00000492275	ANKRD45	Q5TZF3	282 aa		31.46	■■■□□ 2.63
TTC3-223	ENST00000492275	C2orf69	Q8N8R5	385 aa		31.46	■■■□□ 2.63
TTC3-223	ENST00000492275	KLRG1	Q96E93	195 aa		31.46	■■■□□ 2.63
TTC3-223	ENST00000492275	USP40	Q9NVE5	1235 aa		31.46	■■■□□ 2.63
TTC3-223	ENST00000492275	CNTNAP1	P78357	1384 aa		31.45	■■■□□ 2.63
TTC3-223	ENST00000492275	GPR75-ASB3	A0A0A6YYF3	556 aa		31.45	■■■□□ 2.63
TTC3-223	ENST00000492275	LDHC	P07864	332 aa		31.45	■■■□□ 2.63
TTC3-223	ENST00000492275	DEFB115	Q30KQ5	88 aa		31.45	■■■□□ 2.63
TTC3-223	ENST00000492275	FKBP1C	Q5VVH2	108 aa		31.45	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms