RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 ADM5C9JUS6 153 aa19.97■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 LDHBP07195 334 aaKnown RBP19.97■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 MCAMP43121 646 aa19.97■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 CRKP46108 304 aa19.97■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 HDLBPQ00341 1268 aaKnown RBP19.97■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 SPATA5Q8NB90 893 aa19.97■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 MYO1BO43795 1136 aa19.96■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 PRDX5P30044 214 aa19.96■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 EXOC6Q8TAG9 804 aa19.96■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 TEKT1Q969V4 418 aa19.96■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 PRMT6Q96LA8 375 aaPredicted RBP19.96■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 LRRCC1Q9C099 1032 aa19.96■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 DCTPP1Q9H773 170 aa19.96■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 CREBZFQ9NS37 354 aa19.96■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 TRPM7Q96QT4 1865 aa19.96■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 TMEM88BA6NKF7 163 aa19.95■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 HTRA3P83110 453 aa19.95■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 PI16Q6UXB8 463 aa19.95■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 APOBEC3FQ8IUX4 373 aaKnown RBP19.95■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 ZNF512BQ96KM6 892 aaPredicted RBP19.95■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 MRIQ9BWK5 157 aa19.95■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 ABCF2Q9UG63 623 aa19.95■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 IFIT2P09913 472 aaKnown RBP19.94■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 SPTY2D1Q68D10 685 aaPredicted RBP19.94■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 BCL11AQ9H165 835 aa19.94■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 ZNF408Q9H9D4 720 aa19.94■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 POLR2AP24928 1970 aaKnown RBP19.94■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 CLRN2A0PK11 232 aa19.93■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 CELF2O95319 508 aaKnown RBP19.93■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 HHIPL2Q6UWX4 724 aa19.93■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 DLK2Q6UY11 383 aa19.93■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 ZDHHC15Q96MV8 337 aa19.93■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 SCAF8Q9UPN6 1271 aaKnown RBP19.93■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 AOX1Q06278 1338 aa19.93■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 CST9Q5W186 159 aa19.92■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 ERICH6Q7L0X2 663 aa19.92■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 DZIP1Q86YF9 867 aaKnown RBP19.92■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 CDCA5Q96FF9 252 aa19.92■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 SNRKQ9NRH2 765 aa19.92■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 AKAP11Q9UKA4 1901 aa19.92■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 SMARCA5O60264 1052 aaPredicted RBP19.91■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 HDAC1Q13547 482 aaPredicted RBP19.91■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 DIXDC1Q155Q3 683 aa19.91■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 SPDYE2Q495Y8 402 aa19.91■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 TDRD3Q9H7E2 651 aaKnown RBP19.91■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 VEZTQ9HBM0 779 aa19.91■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 ZNF70Q9UC06 446 aaPredicted RBP19.91■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 ZAP70P43403 619 aa19.9■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 IRX6P78412 446 aaPredicted RBP19.9■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 APOBEC3HQ6NTF7 200 aaKnown RBP19.9■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 TBC1D9Q6ZT07 1266 aa19.9■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 ABT1Q9ULW3 272 aaKnown RBP19.9■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 DAGLAQ9Y4D2 1042 aa19.9■□□□□ 0.78
MSH5-SAPCD1-206ENST00000491552 CYP2E1P05181 493 aaPredicted RBP19.89■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 MAST2Q6P0Q8 1798 aa19.89■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 SLF2Q8IX21 1173 aa19.89■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 RAI14Q9P0K7 980 aa19.89■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 PPP2R3BQ9Y5P8 575 aa19.89■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 MECOMQ03112 1051 aa19.88■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 TNFAIP1Q13829 316 aa19.88■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 DEFB129Q9H1M3 183 aa19.88■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 LRP2BPQ9P2M1 347 aa19.88■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 GAKO14976 1311 aa19.87■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 MYH2Q9UKX2 1941 aa19.87■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 PRAMEF18Q5VWM3 479 aa19.87■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.87■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 GCC1Q96CN9 775 aa19.87■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 TMOD2Q9NZR1 351 aa19.87■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 TLL2Q9Y6L7 1015 aa19.87■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 CNTNAP1P78357 1384 aa19.86■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 MROH7-TTC4A0A0A0MT08 1334 aa19.86■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 NF2P35240 595 aa19.86■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 GSTO1P78417 241 aa19.86■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 DNAJC5GQ8N7S2 189 aa19.86■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 NSUN4Q96CB9 384 aaKnown RBP19.86■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 FAM163AQ96GL9 167 aaPredicted RBP19.86■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 RWDD1Q9H446 243 aaPredicted RBP19.86■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 GBA2Q9HCG7 927 aaPredicted RBP19.86■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 PIH1D3Q9NQM4 214 aaKnown RBP19.86■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 NDUFB9Q9Y6M9 179 aa19.86■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 RASSF10A6NK89 507 aa19.85■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 TCP10L2B9ZVM9 353 aa19.85■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 IGSF3O75054 1194 aa19.85■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 TNNI2P48788 182 aa19.85■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 RASA3Q14644 834 aa19.85■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 C2orf69Q8N8R5 385 aa19.85■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 ZNF384Q8TF68 577 aa19.85■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 KLRG1Q96E93 195 aa19.85■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 MKRN1Q9UHC7 482 aaKnown RBP19.85■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 PAPPA2Q9BXP8 1791 aa19.85■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 LDHCP07864 332 aa19.84■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 ATP5JP18859 108 aa19.84■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 CACNB3P54284 484 aa19.84■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 CDC42EP5Q6NZY7 148 aa19.84■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 SAPCD2Q86UD0 394 aa19.84■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 GPATCH3Q96I76 525 aa19.84■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 ZBTB47Q9UFB7 747 aaPredicted RBP19.84■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 BTDP43251 543 aa19.83■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 FKBP1BP68106 108 aa19.83■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 DEFB115Q30KQ5 88 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms