RNA–Protein interactions for RNA: ENST00000478620.2

COL19A1-203, Transcript of collagen type XIX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL19A1, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-203ENST00000478620 ZNF408Q9H9D4 720 aa25.67■■□□□ 1.7
COL19A1-203ENST00000478620 TLR7Q9NYK1 1049 aaKnown RBP25.67■■□□□ 1.7
COL19A1-203ENST00000478620 PCDHAC2Q9Y5I4 1007 aa25.67■■□□□ 1.7
COL19A1-203ENST00000478620 ZNF646O15015 1829 aaPredicted RBP25.66■■□□□ 1.7
COL19A1-203ENST00000478620 ZBTB22O15209 634 aa25.66■■□□□ 1.7
COL19A1-203ENST00000478620 HDLBPQ00341 1268 aaKnown RBP25.66■■□□□ 1.7
COL19A1-203ENST00000478620 SNRKQ9NRH2 765 aa25.66■■□□□ 1.7
COL19A1-203ENST00000478620 SALL1Q9NSC2 1324 aa25.65■■□□□ 1.7
COL19A1-203ENST00000478620 SPDYE2BA6NHP3 402 aa25.65■■□□□ 1.7
COL19A1-203ENST00000478620 TMEM88BA6NKF7 163 aa25.65■■□□□ 1.7
COL19A1-203ENST00000478620 ADM5C9JUS6 153 aa25.65■■□□□ 1.7
COL19A1-203ENST00000478620 SPDYE6P0CI01 402 aa25.65■■□□□ 1.7
COL19A1-203ENST00000478620 SCAF8Q9UPN6 1271 aaKnown RBP25.65■■□□□ 1.7
COL19A1-203ENST00000478620 ARAP2Q8WZ64 1704 aa25.65■■□□□ 1.7
COL19A1-203ENST00000478620 COL1A1P02452 1464 aaPredicted RBP25.65■■□□□ 1.7
COL19A1-203ENST00000478620 PDS5AQ29RF7 1337 aaKnown RBP25.64■■□□□ 1.7
COL19A1-203ENST00000478620 PITPNM2Q9BZ72 1349 aa25.64■■□□□ 1.7
COL19A1-203ENST00000478620 SMARCA5O60264 1052 aaPredicted RBP25.64■■□□□ 1.7
COL19A1-203ENST00000478620 PRDX5P30044 214 aa25.64■■□□□ 1.7
COL19A1-203ENST00000478620 MCAMP43121 646 aa25.64■■□□□ 1.7
COL19A1-203ENST00000478620 HTRA3P83110 453 aa25.64■■□□□ 1.7
COL19A1-203ENST00000478620 PI16Q6UXB8 463 aa25.64■■□□□ 1.7
COL19A1-203ENST00000478620 ERICH6Q7L0X2 663 aa25.64■■□□□ 1.7
COL19A1-203ENST00000478620 ZBED3Q96IU2 234 aaPredicted RBP25.64■■□□□ 1.7
COL19A1-203ENST00000478620 MRIQ9BWK5 157 aa25.64■■□□□ 1.7
COL19A1-203ENST00000478620 ZBTB47Q9UFB7 747 aaPredicted RBP25.64■■□□□ 1.7
COL19A1-203ENST00000478620 CLRN2A0PK11 232 aa25.63■■□□□ 1.69
COL19A1-203ENST00000478620 CELF2O95319 508 aaKnown RBP25.63■■□□□ 1.69
COL19A1-203ENST00000478620 DLK2Q6UY11 383 aa25.63■■□□□ 1.69
COL19A1-203ENST00000478620 DZIP1Q86YF9 867 aaKnown RBP25.63■■□□□ 1.69
COL19A1-203ENST00000478620 APOBEC3FQ8IUX4 373 aaKnown RBP25.63■■□□□ 1.69
COL19A1-203ENST00000478620 VEZTQ9HBM0 779 aa25.63■■□□□ 1.69
COL19A1-203ENST00000478620 MYH13Q9UKX3 1938 aa25.63■■□□□ 1.69
COL19A1-203ENST00000478620 TBC1D9Q6ZT07 1266 aa25.62■■□□□ 1.69
COL19A1-203ENST00000478620 ZNF512BQ96KM6 892 aaPredicted RBP25.62■■□□□ 1.69
COL19A1-203ENST00000478620 TDRD3Q9H7E2 651 aaKnown RBP25.62■■□□□ 1.69
COL19A1-203ENST00000478620 CREBZFQ9NS37 354 aa25.62■■□□□ 1.69
COL19A1-203ENST00000478620 RAI14Q9P0K7 980 aa25.62■■□□□ 1.69
COL19A1-203ENST00000478620 LRP2BPQ9P2M1 347 aa25.62■■□□□ 1.69
COL19A1-203ENST00000478620 HHIPL2Q6UWX4 724 aa25.61■■□□□ 1.69
COL19A1-203ENST00000478620 SLF2Q8IX21 1173 aa25.61■■□□□ 1.69
COL19A1-203ENST00000478620 RWDD1Q9H446 243 aaPredicted RBP25.61■■□□□ 1.69
COL19A1-203ENST00000478620 ABT1Q9ULW3 272 aaKnown RBP25.61■■□□□ 1.69
COL19A1-203ENST00000478620 POLR2AP24928 1970 aaKnown RBP25.6■■□□□ 1.69
COL19A1-203ENST00000478620 DIXDC1Q155Q3 683 aa25.6■■□□□ 1.69
COL19A1-203ENST00000478620 ZDHHC15Q96MV8 337 aa25.6■■□□□ 1.69
COL19A1-203ENST00000478620 ZNF70Q9UC06 446 aaPredicted RBP25.6■■□□□ 1.69
COL19A1-203ENST00000478620 ZAP70P43403 619 aa25.59■■□□□ 1.69
COL19A1-203ENST00000478620 CST9Q5W186 159 aa25.59■■□□□ 1.69
COL19A1-203ENST00000478620 CDCA5Q96FF9 252 aa25.59■■□□□ 1.69
COL19A1-203ENST00000478620 TMOD2Q9NZR1 351 aa25.59■■□□□ 1.69
COL19A1-203ENST00000478620 HDAC1Q13547 482 aaPredicted RBP25.58■■□□□ 1.69
COL19A1-203ENST00000478620 PRAMEF18Q5VWM3 479 aa25.58■■□□□ 1.69
COL19A1-203ENST00000478620 GSTO1P78417 241 aa25.57■■□□□ 1.68
COL19A1-203ENST00000478620 AOX1Q06278 1338 aa25.57■■□□□ 1.68
COL19A1-203ENST00000478620 TCP10L2B9ZVM9 353 aa25.56■■□□□ 1.68
COL19A1-203ENST00000478620 CYP2E1P05181 493 aaPredicted RBP25.56■■□□□ 1.68
COL19A1-203ENST00000478620 LDHCP07864 332 aa25.56■■□□□ 1.68
COL19A1-203ENST00000478620 NF2P35240 595 aa25.56■■□□□ 1.68
COL19A1-203ENST00000478620 MECOMQ03112 1051 aa25.56■■□□□ 1.68
COL19A1-203ENST00000478620 TNFAIP1Q13829 316 aa25.56■■□□□ 1.68
COL19A1-203ENST00000478620 SPDYE2Q495Y8 402 aa25.56■■□□□ 1.68
COL19A1-203ENST00000478620 APOBEC3HQ6NTF7 200 aaKnown RBP25.56■■□□□ 1.68
COL19A1-203ENST00000478620 C2orf69Q8N8R5 385 aa25.56■■□□□ 1.68
COL19A1-203ENST00000478620 GCC1Q96CN9 775 aa25.56■■□□□ 1.68
COL19A1-203ENST00000478620 DEFB129Q9H1M3 183 aa25.56■■□□□ 1.68
COL19A1-203ENST00000478620 DAGLAQ9Y4D2 1042 aa25.56■■□□□ 1.68
COL19A1-203ENST00000478620 TNNI2P48788 182 aa25.55■■□□□ 1.68
COL19A1-203ENST00000478620 ANKRD45Q5TZF3 282 aa25.55■■□□□ 1.68
COL19A1-203ENST00000478620 GPATCH3Q96I76 525 aa25.54■■□□□ 1.68
COL19A1-203ENST00000478620 DNAJC2Q99543 621 aaKnown RBP25.54■■□□□ 1.68
COL19A1-203ENST00000478620 USP40Q9NVE5 1235 aa25.54■■□□□ 1.68
COL19A1-203ENST00000478620 NDUFB9Q9Y6M9 179 aa25.54■■□□□ 1.68
COL19A1-203ENST00000478620 TTLL12Q14166 644 aaPredicted RBP25.53■■□□□ 1.68
COL19A1-203ENST00000478620 RASA3Q14644 834 aa25.53■■□□□ 1.68
COL19A1-203ENST00000478620 PAXIP1Q6ZW49 1069 aaPredicted RBP25.53■■□□□ 1.68
COL19A1-203ENST00000478620 BOLA2Q9H3K6 86 aa25.53■■□□□ 1.68
COL19A1-203ENST00000478620 GBA2Q9HCG7 927 aaPredicted RBP25.53■■□□□ 1.68
COL19A1-203ENST00000478620 MKRN1Q9UHC7 482 aaKnown RBP25.53■■□□□ 1.68
COL19A1-203ENST00000478620 IDH1O75874 414 aaKnown RBP25.52■■□□□ 1.68
COL19A1-203ENST00000478620 CACNB3P54284 484 aa25.52■■□□□ 1.68
COL19A1-203ENST00000478620 DEFB115Q30KQ5 88 aa25.52■■□□□ 1.68
COL19A1-203ENST00000478620 NAA16Q6N069 864 aaPredicted RBP25.52■■□□□ 1.68
COL19A1-203ENST00000478620 NSUN4Q96CB9 384 aaKnown RBP25.52■■□□□ 1.68
COL19A1-203ENST00000478620 NOL10Q9BSC4 688 aaKnown RBP25.52■■□□□ 1.68
COL19A1-203ENST00000478620 PIH1D3Q9NQM4 214 aaKnown RBP25.52■■□□□ 1.68
COL19A1-203ENST00000478620 PPP2R3BQ9Y5P8 575 aa25.52■■□□□ 1.68
COL19A1-203ENST00000478620 ATP5JP18859 108 aa25.51■■□□□ 1.67
COL19A1-203ENST00000478620 TTF1Q15361 905 aaPredicted RBP25.51■■□□□ 1.67
COL19A1-203ENST00000478620 CDC42EP5Q6NZY7 148 aa25.51■■□□□ 1.67
COL19A1-203ENST00000478620 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.51■■□□□ 1.67
COL19A1-203ENST00000478620 FAM163AQ96GL9 167 aaPredicted RBP25.51■■□□□ 1.67
COL19A1-203ENST00000478620 MROH7-TTC4A0A0A0MT08 1334 aa25.5■■□□□ 1.67
COL19A1-203ENST00000478620 SUPT20HL1Q3ZLR7 823 aa25.5■■□□□ 1.67
COL19A1-203ENST00000478620 ECHDC1Q9NTX5 307 aa25.5■■□□□ 1.67
COL19A1-203ENST00000478620 TLL2Q9Y6L7 1015 aa25.5■■□□□ 1.67
COL19A1-203ENST00000478620 TRPM7Q96QT4 1865 aa25.49■■□□□ 1.67
COL19A1-203ENST00000478620 GOLIM4O00461 696 aa25.49■■□□□ 1.67
COL19A1-203ENST00000478620 IGHDP01880 384 aa25.49■■□□□ 1.67
COL19A1-203ENST00000478620 BTDP43251 543 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms