RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 G2E3Q7L622 706 aa7.11□□□□□ -1.27
TRA2B-211ENST00000477939 ANKRD18AQ8IVF6 992 aa7.11□□□□□ -1.27
TRA2B-211ENST00000477939 TTLL11Q8NHH1 800 aa7.11□□□□□ -1.27
TRA2B-211ENST00000477939 CXorf38Q8TB03 319 aa7.11□□□□□ -1.27
TRA2B-211ENST00000477939 CCDC94Q9BW85 323 aaPredicted RBP7.11□□□□□ -1.27
TRA2B-211ENST00000477939 ZC3H12CQ9C0D7 883 aaKnown RBP7.11□□□□□ -1.27
TRA2B-211ENST00000477939 GREM2Q9H772 168 aa7.11□□□□□ -1.27
TRA2B-211ENST00000477939 SUDS3Q9H7L9 328 aaPredicted RBP7.11□□□□□ -1.27
TRA2B-211ENST00000477939 CEP126Q9P2H0 1117 aa7.11□□□□□ -1.27
TRA2B-211ENST00000477939 MKI67P46013 3256 aaKnown RBP7.1□□□□□ -1.27
TRA2B-211ENST00000477939 CA12O43570 354 aa7.1□□□□□ -1.27
TRA2B-211ENST00000477939 NOGQ13253 232 aa7.1□□□□□ -1.27
TRA2B-211ENST00000477939 TWISTNBQ3B726 338 aaPredicted RBP7.1□□□□□ -1.27
TRA2B-211ENST00000477939 UBE3BQ7Z3V4 1068 aa7.1□□□□□ -1.27
TRA2B-211ENST00000477939 FRAT1Q92837 279 aaPredicted RBP7.1□□□□□ -1.27
TRA2B-211ENST00000477939 DCPSQ96C86 337 aaKnown RBP7.1□□□□□ -1.27
TRA2B-211ENST00000477939 GMLQ99445 158 aa7.1□□□□□ -1.27
TRA2B-211ENST00000477939 CDC5LQ99459 802 aaKnown RBP7.1□□□□□ -1.27
TRA2B-211ENST00000477939 MTA3Q9BTC8 594 aa7.1□□□□□ -1.27
TRA2B-211ENST00000477939 STK31Q9BXU1 1019 aa7.1□□□□□ -1.27
TRA2B-211ENST00000477939 UBA5Q9GZZ9 404 aa7.1□□□□□ -1.27
TRA2B-211ENST00000477939 GBA2Q9HCG7 927 aaPredicted RBP7.1□□□□□ -1.27
TRA2B-211ENST00000477939 MINPP1Q9UNW1 487 aa7.1□□□□□ -1.27
TRA2B-211ENST00000477939 KIF3AQ9Y496 699 aa7.1□□□□□ -1.27
TRA2B-211ENST00000477939 AKAP11Q9UKA4 1901 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 TNRC18O15417 2968 aaPredicted RBP7.09□□□□□ -1.27
TRA2B-211ENST00000477939 IL16Q14005 1332 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 IRF6O14896 467 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 TPD52L2O43399 206 aaKnown RBP7.09□□□□□ -1.27
TRA2B-211ENST00000477939 ZSCAN20P17040 1043 aaPredicted RBP7.09□□□□□ -1.27
TRA2B-211ENST00000477939 ATP2B4P23634 1241 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 KLRK1P26718 216 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 CASP7P55210 303 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 NEXNQ0ZGT2 675 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 FLIIQ13045 1269 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 FAM161AQ3B820 660 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 FOXD4L6Q3SYB3 417 aaPredicted RBP7.09□□□□□ -1.27
TRA2B-211ENST00000477939 ANGEL2Q5VTE6 544 aaKnown RBP7.09□□□□□ -1.27
TRA2B-211ENST00000477939 RGMBQ6NW40 437 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 FOXD4L3Q6VB84 417 aaPredicted RBP7.09□□□□□ -1.27
TRA2B-211ENST00000477939 TXNRD3Q86VQ6 643 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 SULF1Q8IWU6 871 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 AGBL3Q8NEM8 1001 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 CDCA5Q96FF9 252 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 NCAPGQ9BPX3 1015 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 SMC4Q9NTJ3 1288 aa7.09□□□□□ -1.27
TRA2B-211ENST00000477939 PITPNM2Q9BZ72 1349 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 USP17L3A6NCW0 530 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 USP17L4A6NCW7 530 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 G3V3G9 751 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 H7C1W4 665 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 DYNC1I1O14576 645 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 SLC4A2P04920 1241 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 SLC10A3P09131 477 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 USP17L8P0C7I0 530 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 CCT4P50991 539 aaKnown RBP7.08□□□□□ -1.28
TRA2B-211ENST00000477939 SCARF1Q14162 830 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 GCKRQ14397 625 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 CDC37Q16543 378 aaPredicted RBP7.08□□□□□ -1.28
TRA2B-211ENST00000477939 CSPP1Q1MSJ5 1256 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 DACT2Q5SW24 774 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 DCAF8Q5TAQ9 597 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 USP17L1Q7RTZ2 530 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 PODNQ7Z5L7 613 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 CREBRFQ8IUR6 639 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 C2orf69Q8N8R5 385 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 MXD3Q9BW11 206 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 PLA2G12BQ9BX93 195 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 MYOZ2Q9NPC6 264 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 SCAF8Q9UPN6 1271 aaKnown RBP7.08□□□□□ -1.28
TRA2B-211ENST00000477939 FRMD4BQ9Y2L6 1034 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 ECM29Q5VYK3 1845 aa7.08□□□□□ -1.28
TRA2B-211ENST00000477939 TRIM6-TRIM34B2RNG4 842 aa7.07□□□□□ -1.28
TRA2B-211ENST00000477939 CTAGE5O15320 804 aa7.07□□□□□ -1.28
TRA2B-211ENST00000477939 ITGA6P23229 1130 aa7.07□□□□□ -1.28
TRA2B-211ENST00000477939 ZNF157P51786 506 aaPredicted RBP7.07□□□□□ -1.28
TRA2B-211ENST00000477939 KIF23Q02241 960 aaPredicted RBP7.07□□□□□ -1.28
TRA2B-211ENST00000477939 FKBP5Q13451 457 aaPredicted RBP7.07□□□□□ -1.28
TRA2B-211ENST00000477939 UVSSAQ2YD98 709 aa7.07□□□□□ -1.28
TRA2B-211ENST00000477939 KRBA2Q6ZNG9 492 aa7.07□□□□□ -1.28
TRA2B-211ENST00000477939 RASAL3Q86YV0 1011 aa7.07□□□□□ -1.28
TRA2B-211ENST00000477939 NME8Q8N427 588 aa7.07□□□□□ -1.28
TRA2B-211ENST00000477939 ZNF513Q8N8E2 541 aaPredicted RBP7.07□□□□□ -1.28
TRA2B-211ENST00000477939 LINS1Q8NG48 757 aa7.07□□□□□ -1.28
TRA2B-211ENST00000477939 DNAAF4Q8WXU2 420 aa7.07□□□□□ -1.28
TRA2B-211ENST00000477939 TRIM34Q9BYJ4 488 aa7.07□□□□□ -1.28
TRA2B-211ENST00000477939 MCOLN1Q9GZU1 580 aa7.07□□□□□ -1.28
TRA2B-211ENST00000477939 MRS2Q9HD23 443 aa7.07□□□□□ -1.28
TRA2B-211ENST00000477939 ARAP2Q8WZ64 1704 aa7.07□□□□□ -1.28
TRA2B-211ENST00000477939 ZNF804BA4D1E1 1349 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 MYO3BQ8WXR4 1341 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 KIF16BQ96L93 1317 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 IRS2Q9Y4H2 1338 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 LAMB1P07942 1786 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 CCDC85CA6NKD9 419 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 F6X3S4 739 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 CCER2I3L3R5 266 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 WNT10BO00744 389 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 VAMP4O75379 141 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 SASH1O94885 1247 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms