RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.15■■□□□ 1.3
LMNB1-204ENST00000463908 MRIQ9BWK5 157 aa23.15■■□□□ 1.3
LMNB1-204ENST00000463908 ABCF2Q9UG63 623 aa23.15■■□□□ 1.3
LMNB1-204ENST00000463908 CLEC11AQ9Y240 323 aa23.15■■□□□ 1.3
LMNB1-204ENST00000463908 ADAMTSL1Q8N6G6 1762 aa23.14■■□□□ 1.3
LMNB1-204ENST00000463908 WNT10BO00744 389 aa23.14■■□□□ 1.29
LMNB1-204ENST00000463908 CFAP100Q494V2 611 aa23.14■■□□□ 1.29
LMNB1-204ENST00000463908 CHADLQ6NUI6 762 aa23.14■■□□□ 1.29
LMNB1-204ENST00000463908 PRMT6Q96LA8 375 aaPredicted RBP23.14■■□□□ 1.29
LMNB1-204ENST00000463908 SERPINA10Q9UK55 444 aa23.14■■□□□ 1.29
LMNB1-204ENST00000463908 AKAP11Q9UKA4 1901 aa23.14■■□□□ 1.29
LMNB1-204ENST00000463908 AOX1Q06278 1338 aa23.13■■□□□ 1.29
LMNB1-204ENST00000463908 SALL3Q9BXA9 1300 aa23.13■■□□□ 1.29
LMNB1-204ENST00000463908 LDHBP07195 334 aaKnown RBP23.13■■□□□ 1.29
LMNB1-204ENST00000463908 CRKP46108 304 aa23.13■■□□□ 1.29
LMNB1-204ENST00000463908 HDLBPQ00341 1268 aaKnown RBP23.13■■□□□ 1.29
LMNB1-204ENST00000463908 MAP1SQ66K74 1059 aaPredicted RBP23.13■■□□□ 1.29
LMNB1-204ENST00000463908 ZGPATQ8N5A5 531 aaKnown RBP23.13■■□□□ 1.29
LMNB1-204ENST00000463908 ZNF384Q8TF68 577 aa23.13■■□□□ 1.29
LMNB1-204ENST00000463908 ZC3H15Q8WU90 426 aaKnown RBP23.13■■□□□ 1.29
LMNB1-204ENST00000463908 LNPKQ9C0E8 428 aa23.13■■□□□ 1.29
LMNB1-204ENST00000463908 ANTXR1Q9H6X2 564 aa23.13■■□□□ 1.29
LMNB1-204ENST00000463908 PIH1D3Q9NQM4 214 aaKnown RBP23.13■■□□□ 1.29
LMNB1-204ENST00000463908 ECHDC1Q9NTX5 307 aa23.13■■□□□ 1.29
LMNB1-204ENST00000463908 NEFLP07196 543 aa23.12■■□□□ 1.29
LMNB1-204ENST00000463908 DLGAP5Q15398 846 aa23.12■■□□□ 1.29
LMNB1-204ENST00000463908 TSHZ3Q63HK5 1081 aa23.12■■□□□ 1.29
LMNB1-204ENST00000463908 CHD1LQ86WJ1 897 aa23.12■■□□□ 1.29
LMNB1-204ENST00000463908 BOLA2Q9H3K6 86 aa23.12■■□□□ 1.29
LMNB1-204ENST00000463908 MYH13Q9UKX3 1938 aa23.12■■□□□ 1.29
LMNB1-204ENST00000463908 HTRA3P83110 453 aa23.11■■□□□ 1.29
LMNB1-204ENST00000463908 DIXDC1Q155Q3 683 aa23.11■■□□□ 1.29
LMNB1-204ENST00000463908 SPTY2D1Q68D10 685 aaPredicted RBP23.11■■□□□ 1.29
LMNB1-204ENST00000463908 HHIPL2Q6UWX4 724 aa23.11■■□□□ 1.29
LMNB1-204ENST00000463908 ERICH6Q7L0X2 663 aa23.11■■□□□ 1.29
LMNB1-204ENST00000463908 SMC1BQ8NDV3 1235 aa23.11■■□□□ 1.29
LMNB1-204ENST00000463908 SPDYE2BA6NHP3 402 aa23.1■■□□□ 1.29
LMNB1-204ENST00000463908 ITGBL1O95965 494 aaPredicted RBP23.1■■□□□ 1.29
LMNB1-204ENST00000463908 SPDYE6P0CI01 402 aa23.1■■□□□ 1.29
LMNB1-204ENST00000463908 RBM5P52756 815 aaKnown RBP eCLIP23.1■■□□□ 1.29
LMNB1-204ENST00000463908 MECOMQ03112 1051 aa23.1■■□□□ 1.29
LMNB1-204ENST00000463908 CNTROBQ8N137 903 aa23.1■■□□□ 1.29
LMNB1-204ENST00000463908 TEKT1Q969V4 418 aa23.1■■□□□ 1.29
LMNB1-204ENST00000463908 HAUS7Q99871 368 aa23.1■■□□□ 1.29
LMNB1-204ENST00000463908 ZBTB47Q9UFB7 747 aaPredicted RBP23.1■■□□□ 1.29
LMNB1-204ENST00000463908 ANGEL2Q5VTE6 544 aaKnown RBP23.09■■□□□ 1.29
LMNB1-204ENST00000463908 APOBEC3HQ6NTF7 200 aaKnown RBP23.09■■□□□ 1.29
LMNB1-204ENST00000463908 NSUN4Q96CB9 384 aaKnown RBP23.09■■□□□ 1.29
LMNB1-204ENST00000463908 EDC3Q96F86 508 aaKnown RBP23.09■■□□□ 1.29
LMNB1-204ENST00000463908 LRP2BPQ9P2M1 347 aa23.09■■□□□ 1.29
LMNB1-204ENST00000463908 MAST3O60307 1309 aa23.08■■□□□ 1.29
LMNB1-204ENST00000463908 FSTL1Q12841 308 aa23.08■■□□□ 1.29
LMNB1-204ENST00000463908 DLK2Q6UY11 383 aa23.08■■□□□ 1.29
LMNB1-204ENST00000463908 PI4K2BQ8TCG2 481 aa23.08■■□□□ 1.29
LMNB1-204ENST00000463908 ZDHHC15Q96MV8 337 aa23.08■■□□□ 1.29
LMNB1-204ENST00000463908 DNAJC2Q99543 621 aaKnown RBP23.08■■□□□ 1.29
LMNB1-204ENST00000463908 RAI14Q9P0K7 980 aa23.08■■□□□ 1.29
LMNB1-204ENST00000463908 STAP2Q9UGK3 403 aa23.08■■□□□ 1.29
LMNB1-204ENST00000463908 TTC41PQ6P2S7 1318 aa23.08■■□□□ 1.28
LMNB1-204ENST00000463908 MX1P20591 662 aa23.07■■□□□ 1.28
LMNB1-204ENST00000463908 KLRG1Q96E93 195 aa23.07■■□□□ 1.28
LMNB1-204ENST00000463908 FAM163AQ96GL9 167 aaPredicted RBP23.07■■□□□ 1.28
LMNB1-204ENST00000463908 GGA3Q9NZ52 723 aa23.07■■□□□ 1.28
LMNB1-204ENST00000463908 SCAF8Q9UPN6 1271 aaKnown RBP23.07■■□□□ 1.28
LMNB1-204ENST00000463908 DAGLAQ9Y4D2 1042 aa23.07■■□□□ 1.28
LMNB1-204ENST00000463908 GOLIM4O00461 696 aa23.06■■□□□ 1.28
LMNB1-204ENST00000463908 PDE1AP54750 535 aa23.06■■□□□ 1.28
LMNB1-204ENST00000463908 USP48Q86UV5 1035 aa23.06■■□□□ 1.28
LMNB1-204ENST00000463908 DZIP1Q86YF9 867 aaKnown RBP23.06■■□□□ 1.28
LMNB1-204ENST00000463908 TDRD3Q9H7E2 651 aaKnown RBP23.06■■□□□ 1.28
LMNB1-204ENST00000463908 PDE4AP27815 886 aa23.05■■□□□ 1.28
LMNB1-204ENST00000463908 FMR1Q06787 632 aaKnown RBP eCLIP23.05■■□□□ 1.28
LMNB1-204ENST00000463908 DCPSQ96C86 337 aaKnown RBP23.05■■□□□ 1.28
LMNB1-204ENST00000463908 GPATCH3Q96I76 525 aa23.05■■□□□ 1.28
LMNB1-204ENST00000463908 GLIS2Q9BZE0 524 aaPredicted RBP23.05■■□□□ 1.28
LMNB1-204ENST00000463908 PAG1Q9NWQ8 432 aa23.05■■□□□ 1.28
LMNB1-204ENST00000463908 GAKO14976 1311 aa23.05■■□□□ 1.28
LMNB1-204ENST00000463908 CLRN2A0PK11 232 aa23.04■■□□□ 1.28
LMNB1-204ENST00000463908 CDC37L1Q7L3B6 337 aa23.04■■□□□ 1.28
LMNB1-204ENST00000463908 PLEKHM2Q8IWE5 1019 aa23.04■■□□□ 1.28
LMNB1-204ENST00000463908 ZNF70Q9UC06 446 aaPredicted RBP23.04■■□□□ 1.28
LMNB1-204ENST00000463908 TRAF5O00463 557 aa23.03■■□□□ 1.28
LMNB1-204ENST00000463908 IGSF3O75054 1194 aa23.03■■□□□ 1.28
LMNB1-204ENST00000463908 IDH1O75874 414 aaKnown RBP23.03■■□□□ 1.28
LMNB1-204ENST00000463908 TTF1Q15361 905 aaPredicted RBP23.03■■□□□ 1.28
LMNB1-204ENST00000463908 SPDYE2Q495Y8 402 aa23.03■■□□□ 1.28
LMNB1-204ENST00000463908 ERICH6BQ5W0A0 696 aa23.03■■□□□ 1.28
LMNB1-204ENST00000463908 JMYQ8N9B5 988 aa23.03■■□□□ 1.28
LMNB1-204ENST00000463908 PASKQ96RG2 1323 aa23.03■■□□□ 1.28
LMNB1-204ENST00000463908 PITPNM2Q9BZ72 1349 aa23.03■■□□□ 1.28
LMNB1-204ENST00000463908 GPR75-ASB3A0A0A6YYF3 556 aa23.02■■□□□ 1.28
LMNB1-204ENST00000463908 ADM5C9JUS6 153 aa23.02■■□□□ 1.28
LMNB1-204ENST00000463908 GLRX3O76003 335 aaKnown RBP23.02■■□□□ 1.28
LMNB1-204ENST00000463908 CDC42EP5Q6NZY7 148 aa23.02■■□□□ 1.28
LMNB1-204ENST00000463908 KRT26Q7Z3Y9 468 aa23.02■■□□□ 1.28
LMNB1-204ENST00000463908 ADGRA1Q86SQ6 560 aa23.02■■□□□ 1.28
LMNB1-204ENST00000463908 MROH7-TTC4A0A0A0MT08 1334 aa23.02■■□□□ 1.28
LMNB1-204ENST00000463908 ERC2O15083 957 aa23.01■■□□□ 1.27
LMNB1-204ENST00000463908 MYO1BO43795 1136 aa23.01■■□□□ 1.27
LMNB1-204ENST00000463908 MAP4K4O95819 1239 aaPredicted RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms