RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 IL25Q9H293 177 aa17.34■□□□□ 0.37
COL6A1-202ENST00000463060 A0A0D9SFI3 127 aa17.33■□□□□ 0.36
COL6A1-202ENST00000463060 SGSM2O43147 1006 aa17.33■□□□□ 0.36
COL6A1-202ENST00000463060 SEC24BO95487 1268 aa17.33■□□□□ 0.36
COL6A1-202ENST00000463060 LDHBP07195 334 aaKnown RBP17.33■□□□□ 0.36
COL6A1-202ENST00000463060 YY1P25490 414 aa17.33■□□□□ 0.36
COL6A1-202ENST00000463060 OSBP2Q969R2 916 aa17.33■□□□□ 0.36
COL6A1-202ENST00000463060 FAM163AQ96GL9 167 aaPredicted RBP17.33■□□□□ 0.36
COL6A1-202ENST00000463060 ESYT1Q9BSJ8 1104 aa17.33■□□□□ 0.36
COL6A1-202ENST00000463060 HELLSQ9NRZ9 838 aa17.33■□□□□ 0.36
COL6A1-202ENST00000463060 ZNF532Q9HCE3 1301 aa17.32■□□□□ 0.36
COL6A1-202ENST00000463060 PSMD14O00487 310 aa17.32■□□□□ 0.36
COL6A1-202ENST00000463060 RAD17O75943 681 aa17.32■□□□□ 0.36
COL6A1-202ENST00000463060 MAGEB6Q8N7X4 407 aa17.32■□□□□ 0.36
COL6A1-202ENST00000463060 APPBP2Q92624 585 aa17.32■□□□□ 0.36
COL6A1-202ENST00000463060 MRIQ9BWK5 157 aa17.32■□□□□ 0.36
COL6A1-202ENST00000463060 DIAPH3Q9NSV4 1193 aa17.32■□□□□ 0.36
COL6A1-202ENST00000463060 RAI14Q9P0K7 980 aa17.32■□□□□ 0.36
COL6A1-202ENST00000463060 RSBN1LQ6PCB5 846 aaPredicted RBP17.31■□□□□ 0.36
COL6A1-202ENST00000463060 CWC27Q6UX04 472 aaKnown RBP17.31■□□□□ 0.36
COL6A1-202ENST00000463060 ADGRA1Q86SQ6 560 aa17.31■□□□□ 0.36
COL6A1-202ENST00000463060 SEC62Q99442 399 aaKnown RBP17.31■□□□□ 0.36
COL6A1-202ENST00000463060 PUS7LQ9H0K6 701 aaKnown RBP17.31■□□□□ 0.36
COL6A1-202ENST00000463060 MCMDC2Q4G0Z9 681 aa17.3■□□□□ 0.36
COL6A1-202ENST00000463060 CIAPIN1Q6FI81 312 aa17.3■□□□□ 0.36
COL6A1-202ENST00000463060 CASC1Q6TDU7 716 aa17.3■□□□□ 0.36
COL6A1-202ENST00000463060 RUFY2Q8WXA3 655 aa17.3■□□□□ 0.36
COL6A1-202ENST00000463060 MAST3O60307 1309 aa17.29■□□□□ 0.36
COL6A1-202ENST00000463060 MYO3BQ8WXR4 1341 aa17.29■□□□□ 0.36
COL6A1-202ENST00000463060 RAD50Q92878 1312 aa17.29■□□□□ 0.36
COL6A1-202ENST00000463060 CYP7A1P22680 504 aa17.29■□□□□ 0.36
COL6A1-202ENST00000463060 HDLBPQ00341 1268 aaKnown RBP17.29■□□□□ 0.36
COL6A1-202ENST00000463060 TNIP1Q15025 636 aa17.29■□□□□ 0.36
COL6A1-202ENST00000463060 NAA16Q6N069 864 aaPredicted RBP17.29■□□□□ 0.36
COL6A1-202ENST00000463060 ZNF589Q86UQ0 364 aaPredicted RBP17.29■□□□□ 0.36
COL6A1-202ENST00000463060 AGBL3Q8NEM8 1001 aa17.29■□□□□ 0.36
COL6A1-202ENST00000463060 FBXW7Q969H0 707 aa17.29■□□□□ 0.36
COL6A1-202ENST00000463060 MAST2Q6P0Q8 1798 aa17.29■□□□□ 0.36
COL6A1-202ENST00000463060 GAKO14976 1311 aa17.28■□□□□ 0.36
COL6A1-202ENST00000463060 M0R2C6 588 aa17.28■□□□□ 0.36
COL6A1-202ENST00000463060 PPP4CP60510 307 aa17.28■□□□□ 0.36
COL6A1-202ENST00000463060 DIXDC1Q155Q3 683 aa17.28■□□□□ 0.36
COL6A1-202ENST00000463060 C9orf131Q5VYM1 1079 aa17.28■□□□□ 0.36
COL6A1-202ENST00000463060 RIOK1Q9BRS2 568 aaKnown RBP17.28■□□□□ 0.36
COL6A1-202ENST00000463060 ZNF541Q9H0D2 1346 aa17.27■□□□□ 0.36
COL6A1-202ENST00000463060 FOXP2O15409 715 aa17.27■□□□□ 0.36
COL6A1-202ENST00000463060 LDHCP07864 332 aa17.27■□□□□ 0.36
COL6A1-202ENST00000463060 EIF6P56537 245 aaKnown RBP17.27■□□□□ 0.36
COL6A1-202ENST00000463060 GSTO1P78417 241 aa17.27■□□□□ 0.36
COL6A1-202ENST00000463060 HHIPL2Q6UWX4 724 aa17.27■□□□□ 0.36
COL6A1-202ENST00000463060 DZIP1Q86YF9 867 aaKnown RBP17.27■□□□□ 0.36
COL6A1-202ENST00000463060 STRBPQ96SI9 672 aaKnown RBP17.27■□□□□ 0.36
COL6A1-202ENST00000463060 RNF181Q9P0P0 153 aa17.27■□□□□ 0.36
COL6A1-202ENST00000463060 TTF2Q9UNY4 1162 aaKnown RBP17.27■□□□□ 0.36
COL6A1-202ENST00000463060 ZBTB12Q9Y330 459 aaPredicted RBP17.27■□□□□ 0.36
COL6A1-202ENST00000463060 MROH7-TTC4A0A0A0MT08 1334 aa17.26■□□□□ 0.35
COL6A1-202ENST00000463060 MYH2Q9UKX2 1941 aa17.26■□□□□ 0.35
COL6A1-202ENST00000463060 GPR75-ASB3A0A0A6YYF3 556 aa17.26■□□□□ 0.35
COL6A1-202ENST00000463060 RPS12P25398 132 aaKnown RBP17.26■□□□□ 0.35
COL6A1-202ENST00000463060 CCDC129Q6ZRS4 1044 aa17.26■□□□□ 0.35
COL6A1-202ENST00000463060 KIAA0825Q8IV33 1275 aa17.26■□□□□ 0.35
COL6A1-202ENST00000463060 DPF2Q92785 391 aa17.26■□□□□ 0.35
COL6A1-202ENST00000463060 LSG1Q9H089 658 aaKnown RBP17.26■□□□□ 0.35
COL6A1-202ENST00000463060 CCDC171Q6TFL3 1326 aa17.25■□□□□ 0.35
COL6A1-202ENST00000463060 F8W031 263 aaPredicted RBP17.25■□□□□ 0.35
COL6A1-202ENST00000463060 GPAA1O43292 621 aa17.25■□□□□ 0.35
COL6A1-202ENST00000463060 EPB41L2O43491 1005 aaKnown RBP17.25■□□□□ 0.35
COL6A1-202ENST00000463060 MMP14P50281 582 aa17.25■□□□□ 0.35
COL6A1-202ENST00000463060 SLF2Q8IX21 1173 aa17.25■□□□□ 0.35
COL6A1-202ENST00000463060 USP26Q9BXU7 913 aa17.25■□□□□ 0.35
COL6A1-202ENST00000463060 SERPINA10Q9UK55 444 aa17.25■□□□□ 0.35
COL6A1-202ENST00000463060 DAGLAQ9Y4D2 1042 aa17.25■□□□□ 0.35
COL6A1-202ENST00000463060 MAGEB6P1A0A0J9YX57 407 aa17.24■□□□□ 0.35
COL6A1-202ENST00000463060 CRKP46108 304 aa17.24■□□□□ 0.35
COL6A1-202ENST00000463060 SCNN1DP51172 638 aa17.24■□□□□ 0.35
COL6A1-202ENST00000463060 DYNLL1P63167 89 aaKnown RBP17.24■□□□□ 0.35
COL6A1-202ENST00000463060 PTH1RQ03431 593 aa17.24■□□□□ 0.35
COL6A1-202ENST00000463060 APOBEC3HQ6NTF7 200 aaKnown RBP17.24■□□□□ 0.35
COL6A1-202ENST00000463060 GPC2Q8N158 579 aa17.24■□□□□ 0.35
COL6A1-202ENST00000463060 MAP4K1Q92918 833 aa17.24■□□□□ 0.35
COL6A1-202ENST00000463060 ZDHHC15Q96MV8 337 aa17.24■□□□□ 0.35
COL6A1-202ENST00000463060 ARMT1Q9H993 441 aa17.24■□□□□ 0.35
COL6A1-202ENST00000463060 ZC3H4Q9UPT8 1303 aaKnown RBP17.23■□□□□ 0.35
COL6A1-202ENST00000463060 UTRNP46939 3433 aa17.23■□□□□ 0.35
COL6A1-202ENST00000463060 EIF5BO60841 1220 aaKnown RBP17.23■□□□□ 0.35
COL6A1-202ENST00000463060 REC8O95072 547 aa17.23■□□□□ 0.35
COL6A1-202ENST00000463060 MBD4O95243 580 aa17.23■□□□□ 0.35
COL6A1-202ENST00000463060 USP17L8P0C7I0 530 aa17.23■□□□□ 0.35
COL6A1-202ENST00000463060 RHBDL3P58872 404 aa17.23■□□□□ 0.35
COL6A1-202ENST00000463060 ZNF280AP59817 542 aaPredicted RBP17.23■□□□□ 0.35
COL6A1-202ENST00000463060 VPS53Q5VIR6 699 aa17.23■□□□□ 0.35
COL6A1-202ENST00000463060 LCORLQ8N3X6 602 aa17.23■□□□□ 0.35
COL6A1-202ENST00000463060 MIGA1Q8NAN2 632 aa17.23■□□□□ 0.35
COL6A1-202ENST00000463060 MTMR14Q8NCE2 650 aa17.23■□□□□ 0.35
COL6A1-202ENST00000463060 TEKT1Q969V4 418 aa17.23■□□□□ 0.35
COL6A1-202ENST00000463060 ZBED3Q96IU2 234 aaPredicted RBP17.23■□□□□ 0.35
COL6A1-202ENST00000463060 TIAM2Q8IVF5 1701 aa17.23■□□□□ 0.35
COL6A1-202ENST00000463060 HSPD1P10809 573 aaKnown RBP17.22■□□□□ 0.35
COL6A1-202ENST00000463060 GMPSP49915 693 aaPredicted RBP17.22■□□□□ 0.35
COL6A1-202ENST00000463060 MFAP1P55081 439 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms