RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 DENND2AQ9ULE3 1009 aa27.8■■■□□ 2.04
TRAF4-207ENST00000461195 DDX19BQ9UMR2 479 aa27.8■■■□□ 2.04
TRAF4-207ENST00000461195 COG6Q9Y2V7 657 aa27.8■■■□□ 2.04
TRAF4-207ENST00000461195 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.8■■■□□ 2.04
TRAF4-207ENST00000461195 COL1A1P02452 1464 aaPredicted RBP27.8■■■□□ 2.04
TRAF4-207ENST00000461195 THSD7BQ9C0I4 1608 aa27.8■■■□□ 2.04
TRAF4-207ENST00000461195 PAPPA2Q9BXP8 1791 aa27.79■■■□□ 2.04
TRAF4-207ENST00000461195 MAST3O60307 1309 aa27.79■■■□□ 2.04
TRAF4-207ENST00000461195 CLRN2A0PK11 232 aa27.79■■■□□ 2.04
TRAF4-207ENST00000461195 ZBTB22O15209 634 aa27.79■■■□□ 2.04
TRAF4-207ENST00000461195 FKBP1BP68106 108 aa27.79■■■□□ 2.04
TRAF4-207ENST00000461195 CEP85Q6P2H3 762 aa27.79■■■□□ 2.04
TRAF4-207ENST00000461195 SURF6O75683 361 aaKnown RBP27.78■■■□□ 2.04
TRAF4-207ENST00000461195 NF2P35240 595 aa27.78■■■□□ 2.04
TRAF4-207ENST00000461195 MAP2K1Q02750 393 aaPredicted RBP27.78■■■□□ 2.04
TRAF4-207ENST00000461195 OS9Q13438 667 aaPredicted RBP27.78■■■□□ 2.04
TRAF4-207ENST00000461195 NEUROD6Q96NK8 337 aa27.78■■■□□ 2.04
TRAF4-207ENST00000461195 DEFB129Q9H1M3 183 aa27.78■■■□□ 2.04
TRAF4-207ENST00000461195 AOX1Q06278 1338 aa27.77■■■□□ 2.04
TRAF4-207ENST00000461195 HSPA8P11142 646 aaKnown RBP27.77■■■□□ 2.04
TRAF4-207ENST00000461195 RGMBQ6NW40 437 aa27.77■■■□□ 2.04
TRAF4-207ENST00000461195 TEKT1Q969V4 418 aa27.77■■■□□ 2.04
TRAF4-207ENST00000461195 MRIQ9BWK5 157 aa27.77■■■□□ 2.04
TRAF4-207ENST00000461195 VEZTQ9HBM0 779 aa27.77■■■□□ 2.04
TRAF4-207ENST00000461195 PPP2R3BQ9Y5P8 575 aa27.77■■■□□ 2.04
TRAF4-207ENST00000461195 PDE3AQ14432 1141 aa27.76■■■□□ 2.03
TRAF4-207ENST00000461195 SPDYE2Q495Y8 402 aa27.76■■■□□ 2.03
TRAF4-207ENST00000461195 CHMP4BQ9H444 224 aaKnown RBP27.76■■■□□ 2.03
TRAF4-207ENST00000461195 NOP58Q9Y2X3 529 aaKnown RBP27.76■■■□□ 2.03
TRAF4-207ENST00000461195 MAP2K2P36507 400 aa27.75■■■□□ 2.03
TRAF4-207ENST00000461195 TDRD3Q9H7E2 651 aaKnown RBP27.75■■■□□ 2.03
TRAF4-207ENST00000461195 ZNF70Q9UC06 446 aaPredicted RBP27.75■■■□□ 2.03
TRAF4-207ENST00000461195 SALL1Q9NSC2 1324 aa27.74■■■□□ 2.03
TRAF4-207ENST00000461195 AOC2O75106 756 aa27.74■■■□□ 2.03
TRAF4-207ENST00000461195 GORABQ5T7V8 394 aa27.74■■■□□ 2.03
TRAF4-207ENST00000461195 YTHDC1Q96MU7 727 aaKnown RBP27.74■■■□□ 2.03
TRAF4-207ENST00000461195 ZDHHC15Q96MV8 337 aa27.74■■■□□ 2.03
TRAF4-207ENST00000461195 GPR108Q9NPR9 543 aa27.74■■■□□ 2.03
TRAF4-207ENST00000461195 ZBTB40Q9NUA8 1239 aa27.74■■■□□ 2.03
TRAF4-207ENST00000461195 PDS5AQ29RF7 1337 aaKnown RBP27.73■■■□□ 2.03
TRAF4-207ENST00000461195 ZNF157P51786 506 aaPredicted RBP27.73■■■□□ 2.03
TRAF4-207ENST00000461195 RASGRF1Q13972 1273 aa27.73■■■□□ 2.03
TRAF4-207ENST00000461195 TTLL12Q14166 644 aaPredicted RBP27.73■■■□□ 2.03
TRAF4-207ENST00000461195 LDHBP07195 334 aaKnown RBP27.72■■■□□ 2.03
TRAF4-207ENST00000461195 TNFAIP1Q13829 316 aa27.72■■■□□ 2.03
TRAF4-207ENST00000461195 HHIPL2Q6UWX4 724 aa27.72■■■□□ 2.03
TRAF4-207ENST00000461195 ZGPATQ8N5A5 531 aaKnown RBP27.72■■■□□ 2.03
TRAF4-207ENST00000461195 CCDC102AQ96A19 550 aa27.72■■■□□ 2.03
TRAF4-207ENST00000461195 PRDX5P30044 214 aa27.71■■■□□ 2.03
TRAF4-207ENST00000461195 NOGQ13253 232 aa27.71■■■□□ 2.03
TRAF4-207ENST00000461195 TNNI3KQ59H18 835 aa27.71■■■□□ 2.03
TRAF4-207ENST00000461195 C20orf194Q5TEA3 1177 aa27.71■■■□□ 2.03
TRAF4-207ENST00000461195 MOB2Q70IA6 237 aa27.71■■■□□ 2.03
TRAF4-207ENST00000461195 FPGT-TNNI3KV9GXZ4 949 aa27.71■■■□□ 2.03
TRAF4-207ENST00000461195 RASA3Q14644 834 aa27.7■■■□□ 2.02
TRAF4-207ENST00000461195 RPAP2Q8IXW5 612 aaPredicted RBP27.7■■■□□ 2.02
TRAF4-207ENST00000461195 FAM155AB1AL88 458 aaPredicted RBP27.69■■■□□ 2.02
TRAF4-207ENST00000461195 UBE2Q2LH0YL09 131 aa27.69■■■□□ 2.02
TRAF4-207ENST00000461195 SUPT20HL1Q3ZLR7 823 aa27.69■■■□□ 2.02
TRAF4-207ENST00000461195 ARMC9Q7Z3E5 817 aa27.69■■■□□ 2.02
TRAF4-207ENST00000461195 TNNI2P48788 182 aa27.68■■■□□ 2.02
TRAF4-207ENST00000461195 APOBEC3HQ6NTF7 200 aaKnown RBP27.68■■■□□ 2.02
TRAF4-207ENST00000461195 BEGAINQ9BUH8 593 aa27.68■■■□□ 2.02
TRAF4-207ENST00000461195 TCP10L2B9ZVM9 353 aa27.67■■■□□ 2.02
TRAF4-207ENST00000461195 SLC10A3P09131 477 aa27.67■■■□□ 2.02
TRAF4-207ENST00000461195 UQCRFS1P1P0C7P4 283 aa27.67■■■□□ 2.02
TRAF4-207ENST00000461195 ARID4AP29374 1257 aaPredicted RBP27.67■■■□□ 2.02
TRAF4-207ENST00000461195 PRKG1Q13976 671 aa27.67■■■□□ 2.02
TRAF4-207ENST00000461195 ERC1Q8IUD2 1116 aa27.67■■■□□ 2.02
TRAF4-207ENST00000461195 TMOD2Q9NZR1 351 aa27.67■■■□□ 2.02
TRAF4-207ENST00000461195 EXOC6BQ9Y2D4 811 aa27.67■■■□□ 2.02
TRAF4-207ENST00000461195 HMMRO75330 724 aa27.66■■■□□ 2.02
TRAF4-207ENST00000461195 DIXDC1Q155Q3 683 aa27.66■■■□□ 2.02
TRAF4-207ENST00000461195 HSP90AB4PQ58FF6 505 aa27.66■■■□□ 2.02
TRAF4-207ENST00000461195 NBPF12Q5TAG4 269 aaPredicted RBP27.66■■■□□ 2.02
TRAF4-207ENST00000461195 SPTY2D1Q68D10 685 aaPredicted RBP27.66■■■□□ 2.02
TRAF4-207ENST00000461195 SPATA5Q8NB90 893 aa27.66■■■□□ 2.02
TRAF4-207ENST00000461195 ABHD8Q96I13 439 aa27.66■■■□□ 2.02
TRAF4-207ENST00000461195 HMG20BQ9P0W2 317 aa27.66■■■□□ 2.02
TRAF4-207ENST00000461195 ABCF2Q9UG63 623 aa27.66■■■□□ 2.02
TRAF4-207ENST00000461195 SSC5DA1L4H1 1573 aa27.65■■■□□ 2.02
TRAF4-207ENST00000461195 RASAL3Q86YV0 1011 aa27.65■■■□□ 2.02
TRAF4-207ENST00000461195 DBNDD2Q9BQY9 259 aa27.65■■■□□ 2.02
TRAF4-207ENST00000461195 ANGEL1Q9UNK9 670 aaKnown RBP27.65■■■□□ 2.02
TRAF4-207ENST00000461195 DAGLAQ9Y4D2 1042 aa27.65■■■□□ 2.02
TRAF4-207ENST00000461195 MYH2Q9UKX2 1941 aa27.65■■■□□ 2.02
TRAF4-207ENST00000461195 PPP1R12BO60237 982 aaPredicted RBP27.64■■■□□ 2.02
TRAF4-207ENST00000461195 CCDC158Q5M9N0 1113 aa27.64■■■□□ 2.02
TRAF4-207ENST00000461195 DZIP1Q86YF9 867 aaKnown RBP27.64■■■□□ 2.02
TRAF4-207ENST00000461195 ZIC5Q96T25 663 aa27.64■■■□□ 2.02
TRAF4-207ENST00000461195 CACNB3P54284 484 aa27.63■■■□□ 2.01
TRAF4-207ENST00000461195 TTC39AQ5SRH9 613 aa27.63■■■□□ 2.01
TRAF4-207ENST00000461195 FKBP1CQ5VVH2 108 aa27.63■■■□□ 2.01
TRAF4-207ENST00000461195 SIRT2Q8IXJ6 389 aa27.63■■■□□ 2.01
TRAF4-207ENST00000461195 MCAMP43121 646 aa27.62■■■□□ 2.01
TRAF4-207ENST00000461195 MAP3K11Q16584 847 aa27.62■■■□□ 2.01
TRAF4-207ENST00000461195 LDLRAD1Q5T700 205 aa27.62■■■□□ 2.01
TRAF4-207ENST00000461195 PI16Q6UXB8 463 aa27.62■■■□□ 2.01
TRAF4-207ENST00000461195 ERICH6Q7L0X2 663 aa27.62■■■□□ 2.01
TRAF4-207ENST00000461195 SLF2Q8IX21 1173 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms