RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 COL1A1P02452 1464 aaPredicted RBP16.4■□□□□ 0.22
SNHG4-201ENST00000448190 LDHBP07195 334 aaKnown RBP16.39■□□□□ 0.21
SNHG4-201ENST00000448190 ARID4AP29374 1257 aaPredicted RBP16.39■□□□□ 0.21
SNHG4-201ENST00000448190 DIXDC1Q155Q3 683 aa16.39■□□□□ 0.21
SNHG4-201ENST00000448190 SULF1Q8IWU6 871 aa16.39■□□□□ 0.21
SNHG4-201ENST00000448190 LRRCC1Q9C099 1032 aa16.39■□□□□ 0.21
SNHG4-201ENST00000448190 TDRD3Q9H7E2 651 aaKnown RBP16.39■□□□□ 0.21
SNHG4-201ENST00000448190 PASKQ96RG2 1323 aa16.39■□□□□ 0.21
SNHG4-201ENST00000448190 SPDYE2BA6NHP3 402 aa16.38■□□□□ 0.21
SNHG4-201ENST00000448190 SPDYE6P0CI01 402 aa16.38■□□□□ 0.21
SNHG4-201ENST00000448190 MMP14P50281 582 aa16.38■□□□□ 0.21
SNHG4-201ENST00000448190 CST9Q5W186 159 aa16.38■□□□□ 0.21
SNHG4-201ENST00000448190 VEZTQ9HBM0 779 aa16.38■□□□□ 0.21
SNHG4-201ENST00000448190 SERPINA10Q9UK55 444 aa16.38■□□□□ 0.21
SNHG4-201ENST00000448190 CELF2O95319 508 aaKnown RBP16.37■□□□□ 0.21
SNHG4-201ENST00000448190 IGHDP01880 384 aa16.37■□□□□ 0.21
SNHG4-201ENST00000448190 ZAP70P43403 619 aa16.37■□□□□ 0.21
SNHG4-201ENST00000448190 MTMR14Q8NCE2 650 aa16.37■□□□□ 0.21
SNHG4-201ENST00000448190 TEKT1Q969V4 418 aa16.37■□□□□ 0.21
SNHG4-201ENST00000448190 SCN4AP35499 1836 aa16.37■□□□□ 0.21
SNHG4-201ENST00000448190 CYP2E1P05181 493 aaPredicted RBP16.36■□□□□ 0.21
SNHG4-201ENST00000448190 CACNB3P54284 484 aa16.36■□□□□ 0.21
SNHG4-201ENST00000448190 ERICH6Q7L0X2 663 aa16.36■□□□□ 0.21
SNHG4-201ENST00000448190 RAI14Q9P0K7 980 aa16.36■□□□□ 0.21
SNHG4-201ENST00000448190 LRP2BPQ9P2M1 347 aa16.36■□□□□ 0.21
SNHG4-201ENST00000448190 ZNF70Q9UC06 446 aaPredicted RBP16.36■□□□□ 0.21
SNHG4-201ENST00000448190 SUGT1Q9Y2Z0 365 aa16.36■□□□□ 0.21
SNHG4-201ENST00000448190 A0A1B0GUL6 1792 aa16.36■□□□□ 0.21
SNHG4-201ENST00000448190 TMEM88BA6NKF7 163 aa16.35■□□□□ 0.21
SNHG4-201ENST00000448190 TCP10L2B9ZVM9 353 aa16.35■□□□□ 0.21
SNHG4-201ENST00000448190 MYO1BO43795 1136 aa16.35■□□□□ 0.21
SNHG4-201ENST00000448190 MECOMQ03112 1051 aa16.35■□□□□ 0.21
SNHG4-201ENST00000448190 ANKRD45Q5TZF3 282 aa16.35■□□□□ 0.21
SNHG4-201ENST00000448190 SPTY2D1Q68D10 685 aaPredicted RBP16.35■□□□□ 0.21
SNHG4-201ENST00000448190 APOBEC3HQ6NTF7 200 aaKnown RBP16.35■□□□□ 0.21
SNHG4-201ENST00000448190 DZIP1Q86YF9 867 aaKnown RBP16.35■□□□□ 0.21
SNHG4-201ENST00000448190 PIH1D3Q9NQM4 214 aaKnown RBP16.35■□□□□ 0.21
SNHG4-201ENST00000448190 SALL1Q9NSC2 1324 aa16.35■□□□□ 0.21
SNHG4-201ENST00000448190 HDLBPQ00341 1268 aaKnown RBP16.34■□□□□ 0.21
SNHG4-201ENST00000448190 HDAC1Q13547 482 aaPredicted RBP16.34■□□□□ 0.21
SNHG4-201ENST00000448190 B4GALNT3Q6L9W6 998 aa16.34■□□□□ 0.21
SNHG4-201ENST00000448190 HHIPL2Q6UWX4 724 aa16.34■□□□□ 0.21
SNHG4-201ENST00000448190 ZGPATQ8N5A5 531 aaKnown RBP16.34■□□□□ 0.21
SNHG4-201ENST00000448190 CDCA5Q96FF9 252 aa16.34■□□□□ 0.21
SNHG4-201ENST00000448190 ZNF512BQ96KM6 892 aaPredicted RBP16.34■□□□□ 0.21
SNHG4-201ENST00000448190 MRIQ9BWK5 157 aa16.34■□□□□ 0.21
SNHG4-201ENST00000448190 RWDD1Q9H446 243 aaPredicted RBP16.34■□□□□ 0.21
SNHG4-201ENST00000448190 ANTXR1Q9H6X2 564 aa16.34■□□□□ 0.21
SNHG4-201ENST00000448190 DAGLAQ9Y4D2 1042 aa16.34■□□□□ 0.21
SNHG4-201ENST00000448190 AAMPQ13685 434 aa16.33■□□□□ 0.2
SNHG4-201ENST00000448190 TSHZ3Q63HK5 1081 aa16.33■□□□□ 0.2
SNHG4-201ENST00000448190 OTUD7AQ8TE49 926 aaPredicted RBP16.33■□□□□ 0.2
SNHG4-201ENST00000448190 ZNF384Q8TF68 577 aa16.33■□□□□ 0.2
SNHG4-201ENST00000448190 ZDHHC15Q96MV8 337 aa16.33■□□□□ 0.2
SNHG4-201ENST00000448190 DNAJC2Q99543 621 aaKnown RBP16.33■□□□□ 0.2
SNHG4-201ENST00000448190 DEFB129Q9H1M3 183 aa16.33■□□□□ 0.2
SNHG4-201ENST00000448190 BOLA2Q9H3K6 86 aa16.33■□□□□ 0.2
SNHG4-201ENST00000448190 USP40Q9NVE5 1235 aa16.33■□□□□ 0.2
SNHG4-201ENST00000448190 ABT1Q9ULW3 272 aaKnown RBP16.33■□□□□ 0.2
SNHG4-201ENST00000448190 PDS5AQ29RF7 1337 aaKnown RBP16.33■□□□□ 0.2
SNHG4-201ENST00000448190 ZBTB22O15209 634 aa16.32■□□□□ 0.2
SNHG4-201ENST00000448190 MAST3O60307 1309 aa16.32■□□□□ 0.2
SNHG4-201ENST00000448190 PRKG1Q13976 671 aa16.32■□□□□ 0.2
SNHG4-201ENST00000448190 RASA3Q14644 834 aa16.32■□□□□ 0.2
SNHG4-201ENST00000448190 SPDYE2Q495Y8 402 aa16.32■□□□□ 0.2
SNHG4-201ENST00000448190 CDC42EP5Q6NZY7 148 aa16.32■□□□□ 0.2
SNHG4-201ENST00000448190 MOB2Q70IA6 237 aa16.32■□□□□ 0.2
SNHG4-201ENST00000448190 EDC3Q96F86 508 aaKnown RBP16.32■□□□□ 0.2
SNHG4-201ENST00000448190 PITPNM2Q9BZ72 1349 aa16.32■□□□□ 0.2
SNHG4-201ENST00000448190 CREBZFQ9NS37 354 aa16.32■□□□□ 0.2
SNHG4-201ENST00000448190 MKRN1Q9UHC7 482 aaKnown RBP16.32■□□□□ 0.2
SNHG4-201ENST00000448190 APOBEC3FQ8IUX4 373 aaKnown RBP16.31■□□□□ 0.2
SNHG4-201ENST00000448190 DNAJC5GQ8N7S2 189 aa16.31■□□□□ 0.2
SNHG4-201ENST00000448190 NSUN4Q96CB9 384 aaKnown RBP16.31■□□□□ 0.2
SNHG4-201ENST00000448190 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.31■□□□□ 0.2
SNHG4-201ENST00000448190 FZD1Q9UP38 647 aa16.31■□□□□ 0.2
SNHG4-201ENST00000448190 ADAMTSL1Q8N6G6 1762 aa16.31■□□□□ 0.2
SNHG4-201ENST00000448190 GOLIM4O00461 696 aa16.3■□□□□ 0.2
SNHG4-201ENST00000448190 IDH1O75874 414 aaKnown RBP16.3■□□□□ 0.2
SNHG4-201ENST00000448190 GRM1Q13255 1194 aa16.3■□□□□ 0.2
SNHG4-201ENST00000448190 CDAN1Q8IWY9 1227 aa16.3■□□□□ 0.2
SNHG4-201ENST00000448190 GCC1Q96CN9 775 aa16.3■□□□□ 0.2
SNHG4-201ENST00000448190 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
SNHG4-201ENST00000448190 ATP5JP18859 108 aa16.29■□□□□ 0.2
SNHG4-201ENST00000448190 BTDP43251 543 aa16.29■□□□□ 0.2
SNHG4-201ENST00000448190 TCP10Q12799 353 aa16.29■□□□□ 0.2
SNHG4-201ENST00000448190 TTLL12Q14166 644 aaPredicted RBP16.29■□□□□ 0.2
SNHG4-201ENST00000448190 NBPF12Q5TAG4 269 aaPredicted RBP16.29■□□□□ 0.2
SNHG4-201ENST00000448190 NAA16Q6N069 864 aaPredicted RBP16.29■□□□□ 0.2
SNHG4-201ENST00000448190 PAXIP1Q6ZW49 1069 aaPredicted RBP16.29■□□□□ 0.2
SNHG4-201ENST00000448190 C2orf69Q8N8R5 385 aa16.29■□□□□ 0.2
SNHG4-201ENST00000448190 TMEM39BQ9GZU3 492 aa16.29■□□□□ 0.2
SNHG4-201ENST00000448190 ECHDC1Q9NTX5 307 aa16.29■□□□□ 0.2
SNHG4-201ENST00000448190 UBE2Q2LH0YL09 131 aa16.28■□□□□ 0.2
SNHG4-201ENST00000448190 MAP4K4O95819 1239 aaPredicted RBP16.28■□□□□ 0.2
SNHG4-201ENST00000448190 LDHCP07864 332 aa16.28■□□□□ 0.2
SNHG4-201ENST00000448190 CYP7A1P22680 504 aa16.28■□□□□ 0.2
SNHG4-201ENST00000448190 GSTO1P78417 241 aa16.28■□□□□ 0.2
SNHG4-201ENST00000448190 NFIAQ12857 509 aa16.28■□□□□ 0.2
SNHG4-201ENST00000448190 DEFB115Q30KQ5 88 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms