RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329		Q4G0T1	1027 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	RCSD1	Q6JBY9	416 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	MFN1	Q8IWA4	741 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	SYCP3	Q8IZU3	236 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	USP33	Q8TEY7	942 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	TMX3	Q96JJ7	454 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	ZCWPW1	Q9H0M4	648 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	STRC	Q7RTU9	1775 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	CD2BP2	O95400	341 aa	Known RBP	7.77	□□□□□ -1.16
TRIM6-205	ENST00000445329	INPP5B	P32019	993 aa		7.77	□□□□□ -1.16
TRIM6-205	ENST00000445329	CLCN2	P51788	898 aa		7.77	□□□□□ -1.16
TRIM6-205	ENST00000445329	ACTN3	Q08043	901 aa	Predicted RBP	7.77	□□□□□ -1.16
TRIM6-205	ENST00000445329	NSUN2	Q08J23	767 aa	Known RBP eCLIP	7.77	□□□□□ -1.16
TRIM6-205	ENST00000445329	CWF19L1	Q69YN2	538 aa	Known RBP	7.77	□□□□□ -1.16
TRIM6-205	ENST00000445329	FAAH2	Q6GMR7	532 aa		7.77	□□□□□ -1.16
TRIM6-205	ENST00000445329	CEP57L1	Q8IYX8	460 aa		7.77	□□□□□ -1.16
TRIM6-205	ENST00000445329	ACBD3	Q9H3P7	528 aa		7.77	□□□□□ -1.16
TRIM6-205	ENST00000445329	TFIP11	Q9UBB9	837 aa	Known RBP	7.77	□□□□□ -1.16
TRIM6-205	ENST00000445329	CAPN7	Q9Y6W3	813 aa		7.77	□□□□□ -1.16
TRIM6-205	ENST00000445329	PTPRU	Q92729	1446 aa		7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329		H3BQF6	201 aa		7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	SOGA3	Q5TF21	947 aa		7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	MEX3C	Q5U5Q3	659 aa	Known RBP	7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	RBM41	Q96IZ5	413 aa	Known RBP	7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	AGBL1	Q96MI9	1066 aa		7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	TESK2	Q96S53	571 aa		7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	KIF7	Q2M1P5	1343 aa		7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	YTHDC2	Q9H6S0	1430 aa	Known RBP	7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	ARHGEF28	Q8N1W1	1705 aa	Known RBP	7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	AHCYL1	O43865	530 aa		7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	RPSA	P08865	295 aa	Known RBP	7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	KIF4B	Q2VIQ3	1234 aa		7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	CAPRIN2	Q6IMN6	1127 aa	Known RBP	7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	CLEC4G	Q6UXB4	293 aa		7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	CLIP3	Q96DZ5	547 aa		7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	CHAMP1	Q96JM3	812 aa		7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	SLC7A5P2	Q9GIP4	190 aa		7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	ATP8A1	Q9Y2Q0	1164 aa		7.77	□□□□□ -1.17
TRIM6-205	ENST00000445329	MYO1F	O00160	1098 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	SLC4A2	P04920	1241 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	EZR	P15311	586 aa	Known RBP	7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	HOXA10	P31260	410 aa	Predicted RBP	7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	SLC8A3	P57103	927 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	PTK7	Q13308	1070 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	PKP1	Q13835	747 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	ENOX2	Q16206	610 aa	Known RBP	7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	GALNT17	Q6IS24	598 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	KLHL10	Q6JEL2	608 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	CLASRP	Q8N2M8	674 aa	Known RBP	7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	LRRN4CL	Q8ND94	238 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	BRD4	O60885	1362 aa	Predicted RBP	7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	NPHP4	O75161	1426 aa	Predicted RBP	7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	GOLGA6L10	A6NI86	522 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	FES	P07332	822 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	CCDC92	Q53HC0	331 aa	Predicted RBP	7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	ISM2	Q6H9L7	571 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	DRC7	Q8IY82	874 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	NBPF15	Q8N660	670 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	UBXN4	Q92575	508 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	CENPH	Q9H3R5	247 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	NLRP2	Q9NX02	1062 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	TBX22	Q9Y458	520 aa		7.76	□□□□□ -1.17
TRIM6-205	ENST00000445329	BOLA2-SMG1P6	H3BVE0	249 aa		7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	RNF8	O76064	485 aa		7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	MBD4	O95243	580 aa		7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	PAPOLA	P51003	745 aa	Known RBP	7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	TMED1	Q13445	227 aa		7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	SAFB2	Q14151	953 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	TSR1	Q2NL82	804 aa	Known RBP	7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	SMUG1	Q53HV7	270 aa		7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	CEP85L	Q5SZL2	805 aa		7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	WAPL	Q7Z5K2	1190 aa		7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	C14orf80	Q86SX3	495 aa		7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	RNF168	Q8IYW5	571 aa	Predicted RBP	7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	SLC43A3	Q8NBI5	491 aa		7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	DIS3	Q9Y2L1	958 aa	Known RBP	7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	PCDHGC5	Q9Y5F6	944 aa		7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	FAM169A	Q9Y6X4	670 aa		7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	PPP1R12B	O60237	982 aa	Predicted RBP	7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	BICD2	Q8TD16	824 aa		7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	WHAMM	Q8TF30	809 aa		7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	CUL5	Q93034	780 aa		7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	BICC1	Q9H694	974 aa	Known RBP	7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	INCENP	Q9NQS7	918 aa		7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	DDX20	Q9UHI6	824 aa	Known RBP	7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	BARX2	Q9UMQ3	279 aa	Predicted RBP	7.75	□□□□□ -1.17
TRIM6-205	ENST00000445329	CCDC171	Q6TFL3	1326 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	AP5Z1	O43299	807 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	ERLIN1	O75477	346 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	EIF2S2	P20042	333 aa	Known RBP	7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	ANKRD13A	Q8IZ07	590 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	RSRC1	Q96IZ7	334 aa	Known RBP	7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	ALS2CR12	Q96Q35	445 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	SENP2	Q9HC62	589 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	ORC3	Q9UBD5	711 aa	Predicted RBP	7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329		A0A1B0GVG6	124 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	APBB1	O00213	710 aa		7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms