RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SURF6O75683 361 aaKnown RBP30.53■■■□□ 2.48
RAPGEF1-206ENST00000438647 PDE3AQ14432 1141 aa30.53■■■□□ 2.48
RAPGEF1-206ENST00000438647 GRIK5Q16478 980 aa30.53■■■□□ 2.48
RAPGEF1-206ENST00000438647 TEKT1Q969V4 418 aa30.53■■■□□ 2.48
RAPGEF1-206ENST00000438647 NEUROD6Q96NK8 337 aa30.53■■■□□ 2.48
RAPGEF1-206ENST00000438647 MRIQ9BWK5 157 aa30.53■■■□□ 2.48
RAPGEF1-206ENST00000438647 CLRN2A0PK11 232 aa30.52■■■□□ 2.48
RAPGEF1-206ENST00000438647 DEFB129Q9H1M3 183 aa30.52■■■□□ 2.48
RAPGEF1-206ENST00000438647 VEZTQ9HBM0 779 aa30.52■■■□□ 2.48
RAPGEF1-206ENST00000438647 MAP2K1Q02750 393 aaPredicted RBP30.51■■■□□ 2.47
RAPGEF1-206ENST00000438647 TNFAIP1Q13829 316 aa30.51■■■□□ 2.47
RAPGEF1-206ENST00000438647 GORABQ5T7V8 394 aa30.51■■■□□ 2.47
RAPGEF1-206ENST00000438647 NOP58Q9Y2X3 529 aaKnown RBP30.51■■■□□ 2.47
RAPGEF1-206ENST00000438647 MAP2K2P36507 400 aa30.5■■■□□ 2.47
RAPGEF1-206ENST00000438647 PRAMEF18Q5VWM3 479 aa30.5■■■□□ 2.47
RAPGEF1-206ENST00000438647 RGMBQ6NW40 437 aa30.5■■■□□ 2.47
RAPGEF1-206ENST00000438647 ZGPATQ8N5A5 531 aaKnown RBP30.5■■■□□ 2.47
RAPGEF1-206ENST00000438647 GPR108Q9NPR9 543 aa30.5■■■□□ 2.47
RAPGEF1-206ENST00000438647 PAPPA2Q9BXP8 1791 aa30.5■■■□□ 2.47
RAPGEF1-206ENST00000438647 PDS5AQ29RF7 1337 aaKnown RBP30.49■■■□□ 2.47
RAPGEF1-206ENST00000438647 SALL1Q9NSC2 1324 aa30.49■■■□□ 2.47
RAPGEF1-206ENST00000438647 SPDYE2Q495Y8 402 aa30.49■■■□□ 2.47
RAPGEF1-206ENST00000438647 AIDAQ96BJ3 306 aa30.48■■■□□ 2.47
RAPGEF1-206ENST00000438647 YTHDC1Q96MU7 727 aaKnown RBP30.48■■■□□ 2.47
RAPGEF1-206ENST00000438647 ZDHHC15Q96MV8 337 aa30.48■■■□□ 2.47
RAPGEF1-206ENST00000438647 ZBTB40Q9NUA8 1239 aa30.48■■■□□ 2.47
RAPGEF1-206ENST00000438647 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.48■■■□□ 2.47
RAPGEF1-206ENST00000438647 THSD7BQ9C0I4 1608 aa30.47■■■□□ 2.47
RAPGEF1-206ENST00000438647 LDHBP07195 334 aaKnown RBP30.47■■■□□ 2.47
RAPGEF1-206ENST00000438647 NOGQ13253 232 aa30.47■■■□□ 2.47
RAPGEF1-206ENST00000438647 RASGRF1Q13972 1273 aa30.47■■■□□ 2.47
RAPGEF1-206ENST00000438647 TTLL12Q14166 644 aaPredicted RBP30.47■■■□□ 2.47
RAPGEF1-206ENST00000438647 HHIPL2Q6UWX4 724 aa30.47■■■□□ 2.47
RAPGEF1-206ENST00000438647 RPAP2Q8IXW5 612 aaPredicted RBP30.47■■■□□ 2.47
RAPGEF1-206ENST00000438647 CCDC102AQ96A19 550 aa30.47■■■□□ 2.47
RAPGEF1-206ENST00000438647 TDRD3Q9H7E2 651 aaKnown RBP30.47■■■□□ 2.47
RAPGEF1-206ENST00000438647 ZNF70Q9UC06 446 aaPredicted RBP30.47■■■□□ 2.47
RAPGEF1-206ENST00000438647 ZNF157P51786 506 aaPredicted RBP30.46■■■□□ 2.47
RAPGEF1-206ENST00000438647 WBP1LQ9NX94 342 aa30.46■■■□□ 2.47
RAPGEF1-206ENST00000438647 AOX1Q06278 1338 aa30.46■■■□□ 2.47
RAPGEF1-206ENST00000438647 TNNI3KQ59H18 835 aa30.45■■■□□ 2.47
RAPGEF1-206ENST00000438647 FPGT-TNNI3KV9GXZ4 949 aa30.45■■■□□ 2.47
RAPGEF1-206ENST00000438647 AOC2O75106 756 aa30.44■■■□□ 2.46
RAPGEF1-206ENST00000438647 HMMRO75330 724 aa30.44■■■□□ 2.46
RAPGEF1-206ENST00000438647 PRDX5P30044 214 aa30.44■■■□□ 2.46
RAPGEF1-206ENST00000438647 TNNI2P48788 182 aa30.44■■■□□ 2.46
RAPGEF1-206ENST00000438647 SUPT20HL1Q3ZLR7 823 aa30.44■■■□□ 2.46
RAPGEF1-206ENST00000438647 HSP90AB4PQ58FF6 505 aa30.44■■■□□ 2.46
RAPGEF1-206ENST00000438647 ARMC9Q7Z3E5 817 aa30.44■■■□□ 2.46
RAPGEF1-206ENST00000438647 ERC1Q8IUD2 1116 aa30.44■■■□□ 2.46
RAPGEF1-206ENST00000438647 TMOD2Q9NZR1 351 aa30.44■■■□□ 2.46
RAPGEF1-206ENST00000438647 RASA3Q14644 834 aa30.43■■■□□ 2.46
RAPGEF1-206ENST00000438647 BEGAINQ9BUH8 593 aa30.43■■■□□ 2.46
RAPGEF1-206ENST00000438647 UQCRFS1P1P0C7P4 283 aa30.42■■■□□ 2.46
RAPGEF1-206ENST00000438647 C20orf194Q5TEA3 1177 aa30.42■■■□□ 2.46
RAPGEF1-206ENST00000438647 SPTY2D1Q68D10 685 aaPredicted RBP30.42■■■□□ 2.46
RAPGEF1-206ENST00000438647 ARID4AP29374 1257 aaPredicted RBP30.41■■■□□ 2.46
RAPGEF1-206ENST00000438647 APOBEC3HQ6NTF7 200 aaKnown RBP30.41■■■□□ 2.46
RAPGEF1-206ENST00000438647 ABCF2Q9UG63 623 aa30.41■■■□□ 2.46
RAPGEF1-206ENST00000438647 PPP1R12BO60237 982 aaPredicted RBP30.4■■■□□ 2.46
RAPGEF1-206ENST00000438647 SLC10A3P09131 477 aa30.4■■■□□ 2.46
RAPGEF1-206ENST00000438647 CCDC158Q5M9N0 1113 aa30.4■■■□□ 2.46
RAPGEF1-206ENST00000438647 MOB2Q70IA6 237 aa30.4■■■□□ 2.46
RAPGEF1-206ENST00000438647 FAM155AB1AL88 458 aaPredicted RBP30.39■■■□□ 2.46
RAPGEF1-206ENST00000438647 TCP10L2B9ZVM9 353 aa30.39■■■□□ 2.46
RAPGEF1-206ENST00000438647 UBE2Q2LH0YL09 131 aa30.39■■■□□ 2.46
RAPGEF1-206ENST00000438647 FKBP1CQ5VVH2 108 aa30.39■■■□□ 2.46
RAPGEF1-206ENST00000438647 DZIP1Q86YF9 867 aaKnown RBP30.39■■■□□ 2.46
RAPGEF1-206ENST00000438647 SLF2Q8IX21 1173 aa30.39■■■□□ 2.46
RAPGEF1-206ENST00000438647 SPATA5Q8NB90 893 aa30.39■■■□□ 2.46
RAPGEF1-206ENST00000438647 EXOC6BQ9Y2D4 811 aa30.39■■■□□ 2.46
RAPGEF1-206ENST00000438647 DIXDC1Q155Q3 683 aa30.38■■■□□ 2.45
RAPGEF1-206ENST00000438647 TTC39AQ5SRH9 613 aa30.38■■■□□ 2.45
RAPGEF1-206ENST00000438647 HMG20BQ9P0W2 317 aa30.38■■■□□ 2.45
RAPGEF1-206ENST00000438647 ANGEL1Q9UNK9 670 aaKnown RBP30.38■■■□□ 2.45
RAPGEF1-206ENST00000438647 DAGLAQ9Y4D2 1042 aa30.38■■■□□ 2.45
RAPGEF1-206ENST00000438647 FOXN1O15353 648 aa30.37■■■□□ 2.45
RAPGEF1-206ENST00000438647 CTCFP49711 727 aaPredicted RBP30.37■■■□□ 2.45
RAPGEF1-206ENST00000438647 PRKG1Q13976 671 aa30.37■■■□□ 2.45
RAPGEF1-206ENST00000438647 NBPF12Q5TAG4 269 aaPredicted RBP30.37■■■□□ 2.45
RAPGEF1-206ENST00000438647 DBNDD2Q9BQY9 259 aa30.37■■■□□ 2.45
RAPGEF1-206ENST00000438647 ERICH6Q7L0X2 663 aa30.36■■■□□ 2.45
RAPGEF1-206ENST00000438647 FAM83AQ86UY5 434 aa30.36■■■□□ 2.45
RAPGEF1-206ENST00000438647 RASAL3Q86YV0 1011 aa30.36■■■□□ 2.45
RAPGEF1-206ENST00000438647 MAP3K11Q16584 847 aa30.35■■■□□ 2.45
RAPGEF1-206ENST00000438647 SSC5DA1L4H1 1573 aa30.34■■■□□ 2.45
RAPGEF1-206ENST00000438647 UNCXA6NJT0 531 aa30.34■■■□□ 2.45
RAPGEF1-206ENST00000438647 CA12O43570 354 aa30.34■■■□□ 2.45
RAPGEF1-206ENST00000438647 MCAMP43121 646 aa30.34■■■□□ 2.45
RAPGEF1-206ENST00000438647 ZNF512BQ96KM6 892 aaPredicted RBP30.34■■■□□ 2.45
RAPGEF1-206ENST00000438647 TMEM39BQ9GZU3 492 aa30.34■■■□□ 2.45
RAPGEF1-206ENST00000438647 CACNB3P54284 484 aa30.33■■■□□ 2.45
RAPGEF1-206ENST00000438647 LDLRAD1Q5T700 205 aa30.33■■■□□ 2.45
RAPGEF1-206ENST00000438647 PI16Q6UXB8 463 aa30.33■■■□□ 2.45
RAPGEF1-206ENST00000438647 SIRT2Q8IXJ6 389 aa30.33■■■□□ 2.45
RAPGEF1-206ENST00000438647 REM2Q8IYK8 340 aaPredicted RBP30.33■■■□□ 2.45
RAPGEF1-206ENST00000438647 EAF2Q96CJ1 260 aaPredicted RBP30.33■■■□□ 2.45
RAPGEF1-206ENST00000438647 DBNLQ9UJU6 430 aaKnown RBP30.33■■■□□ 2.45
RAPGEF1-206ENST00000438647 IREB2P48200 963 aaKnown RBP30.32■■■□□ 2.44
RAPGEF1-206ENST00000438647 RHPN1Q8TCX5 695 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms