RNA–Protein interactions for RNA: ENST00000427658.1

AFG3L1P-208, Transcript of AFG3 like matrix AAA peptidase subunit 1, pseudogene, human

TSL 2

Gene AFG3L1P, Length 2,758 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFG3L1P-208	ENST00000427658	ACBD3	Q9H3P7	528 aa		12.02	□□□□□ -0.48
AFG3L1P-208	ENST00000427658	SH2B1	Q9NRF2	756 aa	Predicted RBP	12.02	□□□□□ -0.48
AFG3L1P-208	ENST00000427658	ARHGEF10	O15013	1369 aa		12.02	□□□□□ -0.48
AFG3L1P-208	ENST00000427658	CHUK	O15111	745 aa		12.02	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	RTN2	O75298	545 aa		12.02	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	ERLIN1	O75477	346 aa		12.02	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	CHMP4BP1	P59074	171 aa		12.02	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	CRYM	Q14894	314 aa		12.02	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	POTED	Q86YR6	584 aa		12.02	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	ZNF526	Q8TF50	670 aa	Predicted RBP	12.02	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	CAMTA1	Q9Y6Y1	1673 aa		12.02	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	LRRIQ3	A6PVS8	624 aa	Predicted RBP	12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	CTAGE5	O15320	804 aa		12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	HMMR	O75330	724 aa		12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	NBPF5P	Q86XG9	351 aa	Predicted RBP	12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	ZNF483	Q8TF39	744 aa	Predicted RBP	12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	KIFC2	Q96AC6	838 aa		12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	ADCY9	O60503	1353 aa		12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	ZSCAN12	O43309	604 aa		12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	IBSP	P21815	317 aa	Predicted RBP	12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	NLRP6	P59044	892 aa		12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	GRIK3	Q13003	919 aa		12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	KCNB2	Q92953	911 aa		12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	PPP2R2C	Q9Y2T4	447 aa		12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	KIAA0232	Q92628	1395 aa		12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	FNTA	P49354	379 aa		12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	GOLGA8F	Q08AF8	430 aa		12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	GOLGA8DP	Q0D2H9	430 aa		12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	LARP1	Q6PKG0	1096 aa	Known RBP	12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	LSG1	Q9H089	658 aa	Known RBP	12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	PUF60	Q9UHX1	559 aa	Known RBP	12.01	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	WDHD1	O75717	1129 aa	Predicted RBP	12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	SYF2	O95926	243 aa	Known RBP	12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	PDC	P20941	246 aa		12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	ADCY2	Q08462	1091 aa		12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	ADCK5	Q3MIX3	580 aa		12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	SRGAP1	Q7Z6B7	1085 aa		12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	ILDR1	Q86SU0	546 aa	Predicted RBP	12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	DDX54	Q8TDD1	881 aa	Known RBP	12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	NAT10	Q9H0A0	1025 aa	Known RBP	12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	RGPD5	Q99666	1765 aa		12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	EME2	A4GXA9	379 aa	Predicted RBP	12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	TTC36	A6NLP5	189 aa		12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	PRPF6	O94906	941 aa	Known RBP	12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	MRPL12	P52815	198 aa	Known RBP	12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	OS9	Q13438	667 aa	Predicted RBP	12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	MSANTD4	Q8NCY6	345 aa		12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	ETAA1	Q9NY74	926 aa		12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	EMILIN1	Q9Y6C2	1016 aa		12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	FAM208A	Q9UK61	1670 aa	Known RBP	12	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	FLT4	P35916	1363 aa		11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	CUTA	O60888	179 aa		11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	MAP4K4	O95819	1239 aa	Predicted RBP	11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	VSNL1	P62760	191 aa		11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	IQCA1	Q86XH1	822 aa		11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	CCAR1	Q8IX12	1150 aa	Known RBP	11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	KCNH5	Q8NCM2	988 aa		11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	DDX17	Q92841	729 aa	Known RBP	11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	XAGE2	Q96GT9	111 aa		11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	FMNL2	Q96PY5	1086 aa		11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	LRRCC1	Q9C099	1032 aa		11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	RABEP2	Q9H5N1	569 aa		11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	TPCN1	Q9ULQ1	816 aa		11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	RBM5	P52756	815 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	CEBPZ	Q03701	1054 aa	Known RBP	11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	WLS	Q5T9L3	541 aa		11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	JAKMIP1	Q96N16	626 aa	Known RBP	11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	EHD4	Q9H223	541 aa		11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	GOLPH3L	Q9H4A5	285 aa		11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	CCDC9	Q9Y3X0	531 aa	Known RBP	11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	MAP3K19	Q56UN5	1328 aa		11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	LMO7	Q8WWI1	1683 aa		11.99	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	FRMD3	A2A2Y4	597 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	TOM1	O60784	492 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	SHOX2	O60902	331 aa	Predicted RBP	11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	RHOXF2B	P0C7M4	288 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	FBLN1	P23142	703 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	IRAK1	P51617	712 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	AP1AR	Q63HQ0	302 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	KIRREL3	Q8IZU9	778 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	IGSF22	Q8N9C0	903 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	RHOXF2	Q9BQY4	288 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	KAT14	Q9H8E8	782 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	STAP2	Q9UGK3	403 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	SPG7	Q9UQ90	795 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	POTEB2	H3BUK9	544 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	DIAPH1	O60610	1272 aa	Known RBP	11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	MYBL2	P10244	700 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	PRKAR2B	P31323	418 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	RRS1	Q15050	365 aa	Known RBP	11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	PHACTR3	Q96KR7	559 aa		11.98	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	CAND2	O75155	1236 aa		11.97	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	SKAP2	O75563	359 aa	Predicted RBP	11.97	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	FCHSD1	Q86WN1	690 aa		11.97	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	ARMC2	Q8NEN0	867 aa		11.97	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	BCAS4	Q8TDM0	211 aa		11.97	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	IRAK4	Q9NWZ3	460 aa		11.97	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	CYP46A1	Q9Y6A2	500 aa		11.97	□□□□□ -0.49
AFG3L1P-208	ENST00000427658	CDHR2	Q9BYE9	1310 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms