RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 ZNF589Q86UQ0 364 aaPredicted RBP24.65■■□□□ 1.54
CHKB-201ENST00000406938 DZIP1Q86YF9 867 aaKnown RBP24.65■■□□□ 1.54
CHKB-201ENST00000406938 NSUN4Q96CB9 384 aaKnown RBP24.65■■□□□ 1.54
CHKB-201ENST00000406938 USP17L3A6NCW0 530 aa24.64■■□□□ 1.54
CHKB-201ENST00000406938 USP17L4A6NCW7 530 aa24.64■■□□□ 1.54
CHKB-201ENST00000406938 M0R2C6 588 aa24.64■■□□□ 1.54
CHKB-201ENST00000406938 EIF5BO60841 1220 aaKnown RBP24.64■■□□□ 1.54
CHKB-201ENST00000406938 CCDC129Q6ZRS4 1044 aa24.64■■□□□ 1.54
CHKB-201ENST00000406938 USP17L1Q7RTZ2 530 aa24.64■■□□□ 1.54
CHKB-201ENST00000406938 CERS5Q8N5B7 392 aa24.64■■□□□ 1.54
CHKB-201ENST00000406938 MXD3Q9BW11 206 aa24.64■■□□□ 1.54
CHKB-201ENST00000406938 PUS7LQ9H0K6 701 aaKnown RBP24.64■■□□□ 1.54
CHKB-201ENST00000406938 ANO2Q9NQ90 1003 aa24.64■■□□□ 1.54
CHKB-201ENST00000406938 DACT2Q5SW24 774 aa24.64■■□□□ 1.53
CHKB-201ENST00000406938 NAA16Q6N069 864 aaPredicted RBP24.64■■□□□ 1.53
CHKB-201ENST00000406938 ZNRF3Q9ULT6 936 aa24.64■■□□□ 1.53
CHKB-201ENST00000406938 IGSF3O75054 1194 aa24.63■■□□□ 1.53
CHKB-201ENST00000406938 CYP7A1P22680 504 aa24.63■■□□□ 1.53
CHKB-201ENST00000406938 ADGRA1Q86SQ6 560 aa24.63■■□□□ 1.53
CHKB-201ENST00000406938 JDP2Q8WYK2 163 aa24.63■■□□□ 1.53
CHKB-201ENST00000406938 UPF2Q9HAU5 1272 aaKnown RBP24.63■■□□□ 1.53
CHKB-201ENST00000406938 CCDC171Q6TFL3 1326 aa24.62■■□□□ 1.53
CHKB-201ENST00000406938 FKBP1AP62942 108 aaKnown RBP24.61■■□□□ 1.53
CHKB-201ENST00000406938 SUGT1Q9Y2Z0 365 aa24.61■■□□□ 1.53
CHKB-201ENST00000406938 PSME4Q14997 1843 aa24.61■■□□□ 1.53
CHKB-201ENST00000406938 CCDC88AQ3V6T2 1871 aa24.61■■□□□ 1.53
CHKB-201ENST00000406938 RAD17O75943 681 aa24.61■■□□□ 1.53
CHKB-201ENST00000406938 TMED8Q6PL24 325 aaPredicted RBP24.61■■□□□ 1.53
CHKB-201ENST00000406938 UTRNP46939 3433 aa24.6■■□□□ 1.53
CHKB-201ENST00000406938 DIXDC1Q155Q3 683 aa24.6■■□□□ 1.53
CHKB-201ENST00000406938 KIAA1211Q6ZU35 1233 aa24.6■■□□□ 1.53
CHKB-201ENST00000406938 MIGA1Q8NAN2 632 aa24.6■■□□□ 1.53
CHKB-201ENST00000406938 LSG1Q9H089 658 aaKnown RBP24.6■■□□□ 1.53
CHKB-201ENST00000406938 GPAA1O43292 621 aa24.59■■□□□ 1.53
CHKB-201ENST00000406938 AIDAQ96BJ3 306 aa24.59■■□□□ 1.53
CHKB-201ENST00000406938 TSHZ2Q9NRE2 1034 aa24.59■■□□□ 1.53
CHKB-201ENST00000406938 F8W031 263 aaPredicted RBP24.58■■□□□ 1.53
CHKB-201ENST00000406938 PSMD14O00487 310 aa24.58■■□□□ 1.53
CHKB-201ENST00000406938 LMNB1P20700 586 aa24.58■■□□□ 1.53
CHKB-201ENST00000406938 GSTO1P78417 241 aa24.58■■□□□ 1.53
CHKB-201ENST00000406938 USP26Q9BXU7 913 aa24.58■■□□□ 1.53
CHKB-201ENST00000406938 MBD4O95243 580 aa24.57■■□□□ 1.52
CHKB-201ENST00000406938 PTH1RQ03431 593 aa24.57■■□□□ 1.52
CHKB-201ENST00000406938 TTF2Q9UNY4 1162 aaKnown RBP24.57■■□□□ 1.52
CHKB-201ENST00000406938 CXCL9Q07325 125 aa24.57■■□□□ 1.52
CHKB-201ENST00000406938 GPR162Q16538 588 aa24.57■■□□□ 1.52
CHKB-201ENST00000406938 MROH7-TTC4A0A0A0MT08 1334 aa24.56■■□□□ 1.52
CHKB-201ENST00000406938 VIL1P09327 827 aaKnown RBP24.56■■□□□ 1.52
CHKB-201ENST00000406938 VPS53Q5VIR6 699 aa24.56■■□□□ 1.52
CHKB-201ENST00000406938 RSBN1LQ6PCB5 846 aaPredicted RBP24.56■■□□□ 1.52
CHKB-201ENST00000406938 KIAA0825Q8IV33 1275 aa24.56■■□□□ 1.52
CHKB-201ENST00000406938 LCORLQ8N3X6 602 aa24.56■■□□□ 1.52
CHKB-201ENST00000406938 ARMT1Q9H993 441 aa24.56■■□□□ 1.52
CHKB-201ENST00000406938 MYO3BQ8WXR4 1341 aa24.55■■□□□ 1.52
CHKB-201ENST00000406938 MAGEB6P1A0A0J9YX57 407 aa24.55■■□□□ 1.52
CHKB-201ENST00000406938 TBC1D32Q96NH3 1257 aa24.55■■□□□ 1.52
CHKB-201ENST00000406938 RIOK1Q9BRS2 568 aaKnown RBP24.55■■□□□ 1.52
CHKB-201ENST00000406938 C22orf23Q9BZE7 217 aa24.55■■□□□ 1.52
CHKB-201ENST00000406938 FZD9O00144 591 aa24.54■■□□□ 1.52
CHKB-201ENST00000406938 EPB41L2O43491 1005 aaKnown RBP24.54■■□□□ 1.52
CHKB-201ENST00000406938 CIAPIN1Q6FI81 312 aa24.54■■□□□ 1.52
CHKB-201ENST00000406938 SLF2Q8IX21 1173 aa24.54■■□□□ 1.52
CHKB-201ENST00000406938 STRBPQ96SI9 672 aaKnown RBP24.54■■□□□ 1.52
CHKB-201ENST00000406938 AATFQ9NY61 560 aaKnown RBP eCLIP24.54■■□□□ 1.52
CHKB-201ENST00000406938 GAKO14976 1311 aa24.54■■□□□ 1.52
CHKB-201ENST00000406938 LDHCP07864 332 aa24.53■■□□□ 1.52
CHKB-201ENST00000406938 HSPD1P10809 573 aaKnown RBP24.53■■□□□ 1.52
CHKB-201ENST00000406938 SCNN1DP51172 638 aa24.53■■□□□ 1.52
CHKB-201ENST00000406938 DYNLL1P63167 89 aaKnown RBP24.53■■□□□ 1.52
CHKB-201ENST00000406938 FOXP2O15409 715 aa24.53■■□□□ 1.52
CHKB-201ENST00000406938 MAP4K1Q92918 833 aa24.53■■□□□ 1.52
CHKB-201ENST00000406938 FAM163AQ96GL9 167 aaPredicted RBP24.53■■□□□ 1.52
CHKB-201ENST00000406938 DSCC1Q9BVC3 393 aa24.53■■□□□ 1.52
CHKB-201ENST00000406938 SBF1O95248 1867 aa24.53■■□□□ 1.52
CHKB-201ENST00000406938 MYH2Q9UKX2 1941 aa24.52■■□□□ 1.52
CHKB-201ENST00000406938 EIF6P56537 245 aaKnown RBP24.52■■□□□ 1.52
CHKB-201ENST00000406938 TNIP1Q15025 636 aa24.52■■□□□ 1.52
CHKB-201ENST00000406938 ZBTB12Q9Y330 459 aaPredicted RBP24.52■■□□□ 1.52
CHKB-201ENST00000406938 DAGLAQ9Y4D2 1042 aa24.52■■□□□ 1.52
CHKB-201ENST00000406938 DICER1Q9UPY3 1922 aaKnown RBP24.51■■□□□ 1.51
CHKB-201ENST00000406938 BTDP43251 543 aa24.51■■□□□ 1.51
CHKB-201ENST00000406938 GMLQ99445 158 aa24.51■■□□□ 1.51
CHKB-201ENST00000406938 RNF181Q9P0P0 153 aa24.51■■□□□ 1.51
CHKB-201ENST00000406938 RBM8AQ9Y5S9 174 aaKnown RBP24.51■■□□□ 1.51
CHKB-201ENST00000406938 ADAMTSL1Q8N6G6 1762 aa24.51■■□□□ 1.51
CHKB-201ENST00000406938 ZNF541Q9H0D2 1346 aa24.51■■□□□ 1.51
CHKB-201ENST00000406938 RBM25P49756 843 aaKnown RBP24.5■■□□□ 1.51
CHKB-201ENST00000406938 TEKT1Q969V4 418 aa24.5■■□□□ 1.51
CHKB-201ENST00000406938 NOL10Q9BSC4 688 aaKnown RBP24.5■■□□□ 1.51
CHKB-201ENST00000406938 TIAM2Q8IVF5 1701 aa24.5■■□□□ 1.51
CHKB-201ENST00000406938 GPR75-ASB3A0A0A6YYF3 556 aa24.5■■□□□ 1.51
CHKB-201ENST00000406938 GRIN3BO60391 1043 aa24.5■■□□□ 1.51
CHKB-201ENST00000406938 GNAT2P19087 354 aa24.5■■□□□ 1.51
CHKB-201ENST00000406938 AGBL3Q8NEM8 1001 aa24.5■■□□□ 1.51
CHKB-201ENST00000406938 PRKAB2O43741 272 aa24.49■■□□□ 1.51
CHKB-201ENST00000406938 BAG3O95817 575 aa24.49■■□□□ 1.51
CHKB-201ENST00000406938 MCCP23508 829 aa24.49■■□□□ 1.51
CHKB-201ENST00000406938 CRKP46108 304 aa24.49■■□□□ 1.51
CHKB-201ENST00000406938 HHIPL2Q6UWX4 724 aa24.49■■□□□ 1.51
CHKB-201ENST00000406938 SLC4A4Q9Y6R1 1079 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms