RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 PPFIA3O75145 1194 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 GEMIN4P57678 1058 aaKnown RBP4.72□□□□□ -1.65
CLHC1-201ENST00000401408 FAM98CQ17RN3 349 aaKnown RBP4.72□□□□□ -1.65
CLHC1-201ENST00000401408 Q3C1V9 767 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 BRDTQ58F21 947 aaPredicted RBP4.72□□□□□ -1.65
CLHC1-201ENST00000401408 UBE2Q1Q7Z7E8 422 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 VPS37DQ86XT2 251 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 KRTAP1-3Q8IUG1 177 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 RGL4Q8IZJ4 473 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 NDUFAF2Q8N183 169 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 ATRIPQ8WXE1 791 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 SYT17Q9BSW7 474 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 RAI14Q9P0K7 980 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 VTI1BQ9UEU0 232 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 EGFL7Q9UHF1 273 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 FBXO2Q9UK22 296 aaPredicted RBP4.72□□□□□ -1.65
CLHC1-201ENST00000401408 GJA3Q9Y6H8 435 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 DLC1Q96QB1 1528 aa4.71□□□□□ -1.65
CLHC1-201ENST00000401408 PRMT3O60678 531 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 RPN1P04843 607 aaKnown RBP4.71□□□□□ -1.66
CLHC1-201ENST00000401408 SRGNP10124 158 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 LMNB1P20700 586 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 SOX11P35716 441 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 SERINC3Q13530 473 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 SEPT2Q15019 361 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 DIXDC1Q155Q3 683 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 QPCTQ16769 361 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 LCA5Q86VQ0 697 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 CCDC34Q96HJ3 373 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 CFAP53Q96M91 514 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 PDGFDQ9GZP0 370 aaPredicted RBP4.71□□□□□ -1.66
CLHC1-201ENST00000401408 ZNF700Q9H0M5 742 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 DNAJC25Q9H1X3 360 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 ZNF69Q9UC07 566 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 PCDHGB7Q9Y5F8 929 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 LRPPRCP42704 1394 aaKnown RBP4.71□□□□□ -1.66
CLHC1-201ENST00000401408 TECPR2O15040 1411 aa4.71□□□□□ -1.66
CLHC1-201ENST00000401408 A0A1W2PRQ8 180 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L15C9J2P7 530 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L10C9JJH3 530 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L13C9JLJ4 530 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L12C9JPN9 530 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L11C9JVI0 530 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L21D6R901 530 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L18D6R9N7 530 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L22D6RA61 530 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L17D6RBQ6 530 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L19D6RCP7 530 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L20D6RJB6 530 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 MAP3K7O43318 606 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 FIBPO43427 364 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 SORBS3O60504 671 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 ALDH1L1O75891 902 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 TRIM37O94972 964 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 ANP32AP39687 249 aaKnown RBP4.7□□□□□ -1.66
CLHC1-201ENST00000401408 CDKN1CP49918 316 aaPredicted RBP4.7□□□□□ -1.66
CLHC1-201ENST00000401408 CALD1Q05682 793 aaKnown RBP4.7□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L24Q0WX57 530 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 TAF11Q15544 211 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 CRTC2Q53ET0 693 aaPredicted RBP4.7□□□□□ -1.66
CLHC1-201ENST00000401408 ZNF394Q53GI3 561 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 ALFQ53S48 1182 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 DUSP27Q5VZP5 1158 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 SLC4A10Q6U841 1118 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 FAM196AQ6ZSG2 479 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 C14orf80Q86SX3 495 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 ANKRD13BQ86YJ7 626 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 DNAJC5GQ8N7S2 189 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 HELQQ8TDG4 1101 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 NLRP7Q8WX94 980 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 CDHR1Q96JP9 859 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 TAGLN3Q9UI15 199 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 TMCC3Q9ULS5 477 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 SMC3Q9UQE7 1217 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 ANKRD30AQ9BXX3 1397 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 KCNA2P16389 499 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 SLF2Q8IX21 1173 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 OGFOD1Q8N543 542 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 FAM200AQ8TCP9 573 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 RNF19AQ9NV58 838 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 PRDM4Q9UKN5 801 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 PCDHB8Q9UN66 801 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 SBNO1A3KN83 1393 aa4.7□□□□□ -1.66
CLHC1-201ENST00000401408 PARP4Q9UKK3 1724 aaKnown RBP4.7□□□□□ -1.66
CLHC1-201ENST00000401408 FAM196BA6NMK8 535 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 PES1O00541 588 aaKnown RBP4.69□□□□□ -1.66
CLHC1-201ENST00000401408 IPO8O15397 1037 aaKnown RBP4.69□□□□□ -1.66
CLHC1-201ENST00000401408 APBA3O96018 575 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 HSPA6P17066 643 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 RASA1P20936 1047 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 CASQ1P31415 396 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 MASP1P48740 699 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 GPSM2P81274 684 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 HMGN5P82970 282 aaKnown RBP4.69□□□□□ -1.66
CLHC1-201ENST00000401408 ZBED6P86452 979 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 TTC30AQ86WT1 665 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 JAMLQ86YT9 394 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 SMAP1Q8IYB5 467 aaPredicted RBP4.69□□□□□ -1.66
CLHC1-201ENST00000401408 FMNL2Q96PY5 1086 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 FHDC1Q9C0D6 1143 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms