RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 KLHL10Q6JEL2 608 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 FGAP02671 866 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 TOP1P11387 765 aaKnown RBP5.69□□□□□ -1.5
SMAD4-202ENST00000398417 AFMP43652 599 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 FANCCQ00597 558 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 KIF23Q02241 960 aaPredicted RBP5.69□□□□□ -1.5
SMAD4-202ENST00000398417 PNOCQ13519 176 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 TEX35Q5T0J7 233 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 JMYQ8N9B5 988 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 CCDC97Q96F63 343 aaPredicted RBP5.69□□□□□ -1.5
SMAD4-202ENST00000398417 ZNF274Q96GC6 653 aaPredicted RBP5.69□□□□□ -1.5
SMAD4-202ENST00000398417 DNAI1Q9UI46 699 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 DENND2AQ9ULE3 1009 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 PRDM1O75626 825 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 PHKA1P46020 1223 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 TBC1D10CQ8IV04 446 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 TEX13AQ9BXU3 409 aaPredicted RBP5.69□□□□□ -1.5
SMAD4-202ENST00000398417 hCG_1642624A0A1W2PR95 340 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 PCCAP05165 728 aaPredicted RBP5.69□□□□□ -1.5
SMAD4-202ENST00000398417 SFPQP23246 707 aaKnown RBP eCLIP5.69□□□□□ -1.5
SMAD4-202ENST00000398417 CADPS2Q86UW7 1296 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 PCMTD1Q96MG8 357 aaPredicted RBP5.69□□□□□ -1.5
SMAD4-202ENST00000398417 LLPHQ9BRT6 129 aaKnown RBP5.69□□□□□ -1.5
SMAD4-202ENST00000398417 CTDNEP1O95476 244 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 NDUFA8P51970 172 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 KARSQ15046 597 aaKnown RBP5.68□□□□□ -1.5
SMAD4-202ENST00000398417 CCDC102BQ68D86 513 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 CYB5R4Q7L1T6 521 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 DIS3L2Q8IYB7 885 aaKnown RBP5.68□□□□□ -1.5
SMAD4-202ENST00000398417 TRMT44Q8IYL2 757 aaKnown RBP5.68□□□□□ -1.5
SMAD4-202ENST00000398417 XPO4Q9C0E2 1151 aaKnown RBP5.68□□□□□ -1.5
SMAD4-202ENST00000398417 CGNQ9P2M7 1197 aaKnown RBP5.68□□□□□ -1.5
SMAD4-202ENST00000398417 NEMFO60524 1076 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 TTF1Q15361 905 aaPredicted RBP5.68□□□□□ -1.5
SMAD4-202ENST00000398417 USPL1Q5W0Q7 1092 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 KCNG4Q8TDN1 519 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 SENP2Q9HC62 589 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 ZBTB1Q9Y2K1 713 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 SMARCE1Q969G3 411 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 CABP5Q9NP86 173 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 SEC31BQ9NQW1 1179 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 BTG4Q9NY30 223 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 WDR78Q5VTH9 848 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 MFSD6Q6ZSS7 791 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 WASF1Q92558 559 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 ALDH8A1Q9H2A2 487 aaPredicted RBP5.68□□□□□ -1.5
SMAD4-202ENST00000398417 UTYO14607 1347 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 ELP1O95163 1332 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 ZNF827Q17R98 1081 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 RABL6Q3YEC7 729 aaPredicted RBP5.68□□□□□ -1.5
SMAD4-202ENST00000398417 MB21D2Q8IYB1 491 aaPredicted RBP5.68□□□□□ -1.5
SMAD4-202ENST00000398417 LINC00301Q8NCQ3 95 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 UTP14AQ9BVJ6 771 aaKnown RBP5.68□□□□□ -1.5
SMAD4-202ENST00000398417 COBLO75128 1261 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 YEATS4O95619 227 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 ANTXR2P58335 489 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 WTAPQ15007 396 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 HLFQ16534 295 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 DPF2Q92785 391 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 HOOK1Q9UJC3 728 aaKnown RBP5.68□□□□□ -1.5
SMAD4-202ENST00000398417 JAG2Q9Y219 1238 aa5.68□□□□□ -1.5
SMAD4-202ENST00000398417 UBASH3AP57075 661 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 ZNF174Q15697 407 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 ZNF609O15014 1411 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 SPHKAPQ2M3C7 1700 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 PDE8AO60658 829 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 STAMQ92783 540 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 ZSWIM4Q9H7M6 989 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 FOXN1O15353 648 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 NLRP5P59047 1200 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 EXOSC10Q01780 885 aaKnown RBP5.67□□□□□ -1.5
SMAD4-202ENST00000398417 DPCR1Q3MIW9 517 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 RRAGBQ5VZM2 374 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 ADALQ6DHV7 355 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 SMIM5Q71RC9 77 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 CCDC150Q8NCX0 1101 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.67□□□□□ -1.59e-8■□□□□ 10.8
SMAD4-202ENST00000398417 DACH1Q9UI36 760 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 PXDNQ92626 1479 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 DEPDC5O75140 1603 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 ERVV-2B6SEH9 535 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 NOP2P46087 812 aaKnown RBP5.67□□□□□ -1.5
SMAD4-202ENST00000398417 CASP7P55210 303 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 RTN1Q16799 776 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 NIP7Q9Y221 180 aaKnown RBP eCLIP5.67□□□□□ -1.5
SMAD4-202ENST00000398417 MED23Q9ULK4 1368 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 GSDMDP57764 484 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 DHX8Q14562 1220 aaKnown RBP5.67□□□□□ -1.5
SMAD4-202ENST00000398417 ZNF710Q8N1W2 664 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 KIDINS220Q9ULH0 1771 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 HEG1Q9ULI3 1381 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 SH3TC1Q8TE82 1336 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 ERICH4A6NGS2 130 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 MARCH6O60337 910 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 CIAO1O76071 339 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 XBP1P17861 261 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 CDC27P30260 824 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 BCAMP50895 628 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 BRAPQ7Z569 592 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 PPFIBP1Q86W92 1011 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms