RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 ATP5JP18859 108 aa17.73■□□□□ 0.43
LSS-202ENST00000397728 SUSD4Q5VX71 490 aa17.73■□□□□ 0.43
LSS-202ENST00000397728 BEGAINQ9BUH8 593 aa17.73■□□□□ 0.43
LSS-202ENST00000397728 DBNDD1Q9H9R9 158 aa17.73■□□□□ 0.43
LSS-202ENST00000397728 MRE11P49959 708 aa17.72■□□□□ 0.43
LSS-202ENST00000397728 UBE4AQ14139 1066 aa17.72■□□□□ 0.43
LSS-202ENST00000397728 ZNF526Q8TF50 670 aaPredicted RBP17.72■□□□□ 0.43
LSS-202ENST00000397728 CEP170BQ9Y4F5 1589 aaPredicted RBP17.72■□□□□ 0.43
LSS-202ENST00000397728 CPA1P15085 419 aa17.72■□□□□ 0.43
LSS-202ENST00000397728 HLFQ16534 295 aa17.72■□□□□ 0.43
LSS-202ENST00000397728 SPC24Q8NBT2 197 aa17.72■□□□□ 0.43
LSS-202ENST00000397728 DALRD3Q5D0E6 543 aaKnown RBP17.72■□□□□ 0.43
LSS-202ENST00000397728 DEF6Q9H4E7 631 aa17.72■□□□□ 0.43
LSS-202ENST00000397728 PSDA5PKW4 1024 aaPredicted RBP17.72■□□□□ 0.43
LSS-202ENST00000397728 ZNF853P0CG23 659 aa17.72■□□□□ 0.43
LSS-202ENST00000397728 CLEC4GQ6UXB4 293 aa17.71■□□□□ 0.43
LSS-202ENST00000397728 TCP10L2B9ZVM9 353 aa17.71■□□□□ 0.43
LSS-202ENST00000397728 PHKA1P46020 1223 aa17.71■□□□□ 0.43
LSS-202ENST00000397728 NARFQ9UHQ1 456 aa17.71■□□□□ 0.43
LSS-202ENST00000397728 USP48Q86UV5 1035 aa17.71■□□□□ 0.43
LSS-202ENST00000397728 SULF1Q8IWU6 871 aa17.71■□□□□ 0.43
LSS-202ENST00000397728 TTLL6Q8N841 843 aa17.71■□□□□ 0.43
LSS-202ENST00000397728 SEPT11Q9NVA2 429 aaKnown RBP17.71■□□□□ 0.43
LSS-202ENST00000397728 LEMD3Q9Y2U8 911 aa17.71■□□□□ 0.43
LSS-202ENST00000397728 COPRSQ9NQ92 184 aa17.71■□□□□ 0.42
LSS-202ENST00000397728 MADDQ8WXG6 1647 aa17.7■□□□□ 0.42
LSS-202ENST00000397728 AK2P54819 239 aa17.7■□□□□ 0.42
LSS-202ENST00000397728 TRPM1Q7Z4N2 1603 aa17.7■□□□□ 0.42
LSS-202ENST00000397728 TMC4Q7Z404 712 aa17.7■□□□□ 0.42
LSS-202ENST00000397728 KRI1Q8N9T8 703 aaKnown RBP17.7■□□□□ 0.42
LSS-202ENST00000397728 CALML3P27482 149 aa17.7■□□□□ 0.42
LSS-202ENST00000397728 CTDSPL2Q05D32 466 aa17.7■□□□□ 0.42
LSS-202ENST00000397728 CCDC93Q567U6 631 aa17.7■□□□□ 0.42
LSS-202ENST00000397728 SLC27A3Q5K4L6 730 aa17.7■□□□□ 0.42
LSS-202ENST00000397728 ERMNQ8TAM6 284 aa17.7■□□□□ 0.42
LSS-202ENST00000397728 ARHGEF1Q92888 912 aaKnown RBP17.7■□□□□ 0.42
LSS-202ENST00000397728 EIF5P55010 431 aaKnown RBP17.69■□□□□ 0.42
LSS-202ENST00000397728 NOM1Q5C9Z4 860 aaKnown RBP17.69■□□□□ 0.42
LSS-202ENST00000397728 FBXO3Q9UK99 471 aa17.69■□□□□ 0.42
LSS-202ENST00000397728 SLC1A4P43007 532 aa17.69■□□□□ 0.42
LSS-202ENST00000397728 CSADQ9Y600 493 aa17.69■□□□□ 0.42
LSS-202ENST00000397728 RAD17O75943 681 aa17.69■□□□□ 0.42
LSS-202ENST00000397728 SP4Q02446 784 aa17.69■□□□□ 0.42
LSS-202ENST00000397728 USP17L12C9JPN9 530 aa17.69■□□□□ 0.42
LSS-202ENST00000397728 USP17L21D6R901 530 aa17.69■□□□□ 0.42
LSS-202ENST00000397728 CPXCR1Q8N123 301 aa17.69■□□□□ 0.42
LSS-202ENST00000397728 DCPSQ96C86 337 aaKnown RBP17.69■□□□□ 0.42
LSS-202ENST00000397728 SPATA31A1Q5TZJ5 1347 aa17.68■□□□□ 0.42
LSS-202ENST00000397728 NPR1P16066 1061 aa17.68■□□□□ 0.42
LSS-202ENST00000397728 GNA11P29992 359 aa17.68■□□□□ 0.42
LSS-202ENST00000397728 TSG101Q99816 390 aa17.68■□□□□ 0.42
LSS-202ENST00000397728 AOX1Q06278 1338 aa17.68■□□□□ 0.42
LSS-202ENST00000397728 C21orf2O43822 256 aa17.68■□□□□ 0.42
LSS-202ENST00000397728 ADORA1P30542 326 aa17.68■□□□□ 0.42
LSS-202ENST00000397728 AMPD3Q01432 767 aa17.68■□□□□ 0.42
LSS-202ENST00000397728 IVNS1ABPQ9Y6Y0 642 aa17.68■□□□□ 0.42
LSS-202ENST00000397728 RUFY3Q7L099 469 aa17.68■□□□□ 0.42
LSS-202ENST00000397728 ZSCAN16Q9H4T2 348 aaPredicted RBP17.68■□□□□ 0.42
LSS-202ENST00000397728 PDE6AP16499 860 aa17.67■□□□□ 0.42
LSS-202ENST00000397728 FCHSD1Q86WN1 690 aa17.67■□□□□ 0.42
LSS-202ENST00000397728 KIF20AO95235 890 aa17.67■□□□□ 0.42
LSS-202ENST00000397728 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.67■□□□□ 0.429e-7■■■■■ 126.4
LSS-202ENST00000397728 LRRIQ1Q96JM4 1722 aa17.67■□□□□ 0.42
LSS-202ENST00000397728 SYCE3A1L190 88 aa17.67■□□□□ 0.42
LSS-202ENST00000397728 CYP19A1P11511 503 aaPredicted RBP17.67■□□□□ 0.42
LSS-202ENST00000397728 ADRA2BP18089 450 aa17.67■□□□□ 0.42
LSS-202ENST00000397728 TFAP4Q01664 338 aa17.67■□□□□ 0.42
LSS-202ENST00000397728 SOS2Q07890 1332 aaPredicted RBP17.67■□□□□ 0.42
LSS-202ENST00000397728 SGSM2O43147 1006 aa17.67■□□□□ 0.42
LSS-202ENST00000397728 GOLGA6L1Q8N7Z2 621 aa17.67■□□□□ 0.42
LSS-202ENST00000397728 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.67■□□□□ 0.423e-7■□□□□ 10.4
LSS-202ENST00000397728 PIM2Q9P1W9 311 aa17.67■□□□□ 0.42
LSS-202ENST00000397728 NCAPD2Q15021 1401 aa17.66■□□□□ 0.42
LSS-202ENST00000397728 SMTNL1A8MU46 457 aa17.66■□□□□ 0.42
LSS-202ENST00000397728 MARCH10Q8NA82 808 aaPredicted RBP17.66■□□□□ 0.42
LSS-202ENST00000397728 NEXMIFQ5QGS0 1516 aa17.66■□□□□ 0.42
LSS-202ENST00000397728 BTDP43251 543 aa17.66■□□□□ 0.42
LSS-202ENST00000397728 CFAP100Q494V2 611 aa17.66■□□□□ 0.42
LSS-202ENST00000397728 PTPRUQ92729 1446 aa17.66■□□□□ 0.42
LSS-202ENST00000397728 COL15A1P39059 1388 aa17.66■□□□□ 0.42
LSS-202ENST00000397728 CLRN2A0PK11 232 aa17.66■□□□□ 0.42
LSS-202ENST00000397728 PTPDC1A2A3K4 754 aa17.66■□□□□ 0.42
LSS-202ENST00000397728 BIN1O00499 593 aa17.66■□□□□ 0.42
LSS-202ENST00000397728 SLC27A2O14975 620 aa17.66■□□□□ 0.42
LSS-202ENST00000397728 SMCR8Q8TEV9 937 aaPredicted RBP17.66■□□□□ 0.42
LSS-202ENST00000397728 SDR42E1Q8WUS8 393 aa17.66■□□□□ 0.42
LSS-202ENST00000397728 MASTLQ96GX5 879 aa17.66■□□□□ 0.42
LSS-202ENST00000397728 TMEM87BQ96K49 555 aa17.66■□□□□ 0.42
LSS-202ENST00000397728 IBTKQ9P2D0 1353 aaPredicted RBP17.66■□□□□ 0.42
LSS-202ENST00000397728 TMEM87AQ8NBN3 555 aa17.66■□□□□ 0.42
LSS-202ENST00000397728 TNPO1Q92973 898 aaKnown RBP17.66■□□□□ 0.42
LSS-202ENST00000397728 SMIM5Q71RC9 77 aa17.65■□□□□ 0.42
LSS-202ENST00000397728 IL27Q8NEV9 243 aa17.65■□□□□ 0.42
LSS-202ENST00000397728 USP26Q9BXU7 913 aa17.65■□□□□ 0.42
LSS-202ENST00000397728 CBFA2T2O43439 604 aa17.65■□□□□ 0.42
LSS-202ENST00000397728 TBCAO75347 108 aaKnown RBP17.65■□□□□ 0.42
LSS-202ENST00000397728 GRAPQ13588 217 aa17.65■□□□□ 0.42
LSS-202ENST00000397728 FILIP1Q7Z7B0 1213 aa17.65■□□□□ 0.42
LSS-202ENST00000397728 SYCP3Q8IZU3 236 aa17.65■□□□□ 0.42
LSS-202ENST00000397728 GRAPLQ8TC17 118 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms