RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 CAMTA1Q9Y6Y1 1673 aa13.45□□□□□ -0.26
CCDC57-205ENST00000392346 CCDC69A6NI79 296 aa13.45□□□□□ -0.26
CCDC57-205ENST00000392346 SCARF1Q14162 830 aa13.45□□□□□ -0.26
CCDC57-205ENST00000392346 FAM196AQ6ZSG2 479 aa13.45□□□□□ -0.26
CCDC57-205ENST00000392346 LRP10Q7Z4F1 713 aa13.45□□□□□ -0.26
CCDC57-205ENST00000392346 DEFB132Q7Z7B7 95 aa13.45□□□□□ -0.26
CCDC57-205ENST00000392346 DHX40Q8IX18 779 aaKnown RBP13.45□□□□□ -0.26
CCDC57-205ENST00000392346 ZNF215Q9UL58 517 aaPredicted RBP13.45□□□□□ -0.26
CCDC57-205ENST00000392346 LAMA4Q16363 1823 aa13.45□□□□□ -0.26
CCDC57-205ENST00000392346 E7EWF7 191 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 SKILP12757 684 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 MARCKSP29966 332 aaPredicted RBP13.44□□□□□ -0.26
CCDC57-205ENST00000392346 TTC5Q8N0Z6 440 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 UTYO14607 1347 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 MAST3O60307 1309 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 MEGF6O75095 1541 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 FDPSP14324 419 aaKnown RBP13.44□□□□□ -0.26
CCDC57-205ENST00000392346 PHKG2P15735 406 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 NDUFA8P51970 172 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 LRRC8AQ8IWT6 810 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 INCENPQ9NQS7 918 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 PAG1Q9NWQ8 432 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 PALLDQ8WX93 1383 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 NBPF26B4DH59 902 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 HSPD1P10809 573 aaKnown RBP13.44□□□□□ -0.26
CCDC57-205ENST00000392346 ARID4AP29374 1257 aaPredicted RBP13.44□□□□□ -0.26
CCDC57-205ENST00000392346 GORABQ5T7V8 394 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 NBPF14Q5TI25 921 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 USPL1Q5W0Q7 1092 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 NBPF10Q6P3W6 841 aaKnown RBP13.44□□□□□ -0.26
CCDC57-205ENST00000392346 NBPF15Q8N660 670 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 ANKRD7Q92527 254 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 OSBP2Q969R2 916 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 COPRSQ9NQ92 184 aa13.44□□□□□ -0.26
CCDC57-205ENST00000392346 WASHC4Q2M389 1173 aa13.43□□□□□ -0.26
CCDC57-205ENST00000392346 AXDND1Q5T1B0 1012 aaPredicted RBP13.43□□□□□ -0.26
CCDC57-205ENST00000392346 RBM43Q6ZSC3 357 aaKnown RBP13.43□□□□□ -0.26
CCDC57-205ENST00000392346 PIK3R5Q8WYR1 880 aa13.43□□□□□ -0.26
CCDC57-205ENST00000392346 HAUS7Q99871 368 aa13.43□□□□□ -0.26
CCDC57-205ENST00000392346 HMG20BQ9P0W2 317 aa13.43□□□□□ -0.26
CCDC57-205ENST00000392346 PCDHA7Q9UN72 937 aa13.43□□□□□ -0.26
CCDC57-205ENST00000392346 KIF28PB7ZC32 967 aa13.43□□□□□ -0.26
CCDC57-205ENST00000392346 KINO60870 393 aaKnown RBP13.43□□□□□ -0.26
CCDC57-205ENST00000392346 ELF2Q15723 593 aa13.43□□□□□ -0.26
CCDC57-205ENST00000392346 ATG9AQ7Z3C6 839 aa13.43□□□□□ -0.26
CCDC57-205ENST00000392346 SDF4Q9BRK5 362 aa13.43□□□□□ -0.26
CCDC57-205ENST00000392346 SMC2O95347 1197 aa13.42□□□□□ -0.26
CCDC57-205ENST00000392346 PDIA3P30101 505 aaKnown RBP13.42□□□□□ -0.26
CCDC57-205ENST00000392346 CEP135Q66GS9 1140 aa13.42□□□□□ -0.26
CCDC57-205ENST00000392346 CCDC73Q6ZRK6 1079 aa13.42□□□□□ -0.26
CCDC57-205ENST00000392346 KBTBD3Q8NAB2 608 aa13.42□□□□□ -0.26
CCDC57-205ENST00000392346 CCDC112Q8NEF3 446 aa13.42□□□□□ -0.26
CCDC57-205ENST00000392346 SENP2Q9HC62 589 aa13.42□□□□□ -0.26
CCDC57-205ENST00000392346 COL5A2P05997 1499 aaPredicted RBP13.42□□□□□ -0.26
CCDC57-205ENST00000392346 SLIT3O75094 1523 aa13.42□□□□□ -0.26
CCDC57-205ENST00000392346 SPECC1Q5M775 1068 aa13.42□□□□□ -0.26
CCDC57-205ENST00000392346 DHX32Q7L7V1 743 aaKnown RBP13.42□□□□□ -0.26
CCDC57-205ENST00000392346 MYL10Q9BUA6 226 aa13.42□□□□□ -0.26
CCDC57-205ENST00000392346 U3KPZ7 1027 aaPredicted RBP13.42□□□□□ -0.26
CCDC57-205ENST00000392346 A0A1B0GUL7 405 aa13.41□□□□□ -0.26
CCDC57-205ENST00000392346 CTIFO43310 598 aaKnown RBP13.41□□□□□ -0.26
CCDC57-205ENST00000392346 MARCH6O60337 910 aa13.41□□□□□ -0.26
CCDC57-205ENST00000392346 ATP1A3P13637 1013 aa13.41□□□□□ -0.26
CCDC57-205ENST00000392346 CCZ1BP86790 482 aa13.41□□□□□ -0.26
CCDC57-205ENST00000392346 CCZ1P86791 482 aaPredicted RBP13.41□□□□□ -0.26
CCDC57-205ENST00000392346 CCDC96Q2M329 555 aa13.41□□□□□ -0.26
CCDC57-205ENST00000392346 SMARCC2Q8TAQ2 1214 aa13.41□□□□□ -0.26
CCDC57-205ENST00000392346 AFDNP55196 1824 aaKnown RBP13.41□□□□□ -0.26
CCDC57-205ENST00000392346 WDR17Q8IZU2 1322 aa13.41□□□□□ -0.26
CCDC57-205ENST00000392346 FOXP2O15409 715 aa13.41□□□□□ -0.26
CCDC57-205ENST00000392346 PFKFB2O60825 505 aa13.41□□□□□ -0.26
CCDC57-205ENST00000392346 IFIT1P09914 478 aaKnown RBP13.41□□□□□ -0.26
CCDC57-205ENST00000392346 LMOD1P29536 600 aaPredicted RBP13.41□□□□□ -0.26
CCDC57-205ENST00000392346 CARMIL3Q8ND23 1372 aa13.41□□□□□ -0.26
CCDC57-205ENST00000392346 FOXO4P98177 505 aa13.41□□□□□ -0.26
CCDC57-205ENST00000392346 DDB1Q16531 1140 aa13.41□□□□□ -0.26
CCDC57-205ENST00000392346 NBPF11Q86T75 865 aa13.41□□□□□ -0.26
CCDC57-205ENST00000392346 SRCAPQ6ZRS2 3230 aa13.4□□□□□ -0.26
CCDC57-205ENST00000392346 STX1AQ16623 288 aa13.4□□□□□ -0.26
CCDC57-205ENST00000392346 RBM26Q5T8P6 1007 aaKnown RBP13.4□□□□□ -0.26
CCDC57-205ENST00000392346 TMC6Q7Z403 805 aa13.4□□□□□ -0.26
CCDC57-205ENST00000392346 CDCA7Q9BWT1 371 aaPredicted RBP13.4□□□□□ -0.26
CCDC57-205ENST00000392346 IFNKQ9P0W0 207 aa13.4□□□□□ -0.26
CCDC57-205ENST00000392346 MROH7-TTC4A0A0A0MT08 1334 aa13.4□□□□□ -0.26
CCDC57-205ENST00000392346 SNAP23O00161 211 aa13.4□□□□□ -0.26
CCDC57-205ENST00000392346 TRIM37O94972 964 aa13.4□□□□□ -0.26
CCDC57-205ENST00000392346 SF3A1Q15459 793 aaKnown RBP13.4□□□□□ -0.26
CCDC57-205ENST00000392346 XPO4Q9C0E2 1151 aaKnown RBP13.4□□□□□ -0.26
CCDC57-205ENST00000392346 EPC1Q9H2F5 836 aa13.4□□□□□ -0.26
CCDC57-205ENST00000392346 CFAP45Q9UL16 551 aa13.4□□□□□ -0.26
CCDC57-205ENST00000392346 KLF18A0A0U1RQI7 1052 aa13.39□□□□□ -0.27
CCDC57-205ENST00000392346 GOLGA8BA8MQT2 603 aa13.39□□□□□ -0.27
CCDC57-205ENST00000392346 SNRPA1P09661 255 aaKnown RBP13.39□□□□□ -0.27
CCDC57-205ENST00000392346 TATP17735 454 aaPredicted RBP13.39□□□□□ -0.27
CCDC57-205ENST00000392346 CASP7P55210 303 aa13.39□□□□□ -0.27
CCDC57-205ENST00000392346 CABP4P57796 275 aa13.39□□□□□ -0.27
CCDC57-205ENST00000392346 KRT32Q14532 448 aa13.39□□□□□ -0.27
CCDC57-205ENST00000392346 ENGASEQ8NFI3 743 aa13.39□□□□□ -0.27
CCDC57-205ENST00000392346 PUS7LQ9H0K6 701 aaKnown RBP13.39□□□□□ -0.27
CCDC57-205ENST00000392346 KMT5BQ4FZB7 885 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms