RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 VAMP4O75379 141 aa19.23■□□□□ 0.67
COL4A3BP-203ENST00000380494 CYB5RLQ6IPT4 315 aa19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 TAOK1Q7L7X3 1001 aa19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 C17orf53Q8N3J3 647 aaPredicted RBP19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 PUS7Q96PZ0 661 aaKnown RBP19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 PLCB1Q9NQ66 1216 aa19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 ARHGEF12Q9NZN5 1544 aa19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 A0A1B0GVL5 298 aa19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 TLDC2A0PJX2 215 aa19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 GRM8O00222 908 aa19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 PAK2Q13177 524 aa19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 ACTN4O43707 911 aaKnown RBP19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 HELLSQ9NRZ9 838 aa19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 HPDP32754 393 aaPredicted RBP19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 GSTO1P78417 241 aa19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 SECISBP2LQ93073 1101 aaKnown RBP19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 PRDM11Q9NQV5 511 aa19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 UTP11Q9Y3A2 253 aaKnown RBP19.22■□□□□ 0.67
COL4A3BP-203ENST00000380494 WHAMMP3Q1A5X7 153 aa19.21■□□□□ 0.67
COL4A3BP-203ENST00000380494 ZBTB7BO15156 539 aaPredicted RBP19.21■□□□□ 0.67
COL4A3BP-203ENST00000380494 ATP8B1O43520 1251 aa19.21■□□□□ 0.67
COL4A3BP-203ENST00000380494 ZRANB1Q9UGI0 708 aa19.21■□□□□ 0.67
COL4A3BP-203ENST00000380494 TRAF1Q13077 416 aa19.21■□□□□ 0.67
COL4A3BP-203ENST00000380494 USHBP1Q8N6Y0 703 aa19.21■□□□□ 0.67
COL4A3BP-203ENST00000380494 TNNQ9UQP3 1299 aa19.21■□□□□ 0.67
COL4A3BP-203ENST00000380494 SMIM23A6NLE4 172 aa19.21■□□□□ 0.67
COL4A3BP-203ENST00000380494 GOLGA8KD6RF30 607 aa19.21■□□□□ 0.67
COL4A3BP-203ENST00000380494 MIPOL1Q8TD10 442 aa19.21■□□□□ 0.67
COL4A3BP-203ENST00000380494 CDC5LQ99459 802 aaKnown RBP19.21■□□□□ 0.67
COL4A3BP-203ENST00000380494 EFCAB8A8MWE9 144 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 KSR2Q6VAB6 950 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 CABS1Q96KC9 395 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 CTNND2Q9UQB3 1225 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 RILPL1Q5EBL4 403 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 CEP85LQ5SZL2 805 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 LEO1Q8WVC0 666 aaPredicted RBP19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 IQCDQ96DY2 449 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 BICDL1Q6ZP65 573 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 NEDD9Q14511 834 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 AEBP2Q6ZN18 517 aaPredicted RBP19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 CCDC51Q96ER9 411 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 NOX5Q96PH1 765 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 VCX3BQ9H321 246 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 C6orf50Q9HD87 102 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 SERPINA10Q9UK55 444 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 SLC4A4Q9Y6R1 1079 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 ANO1Q5XXA6 986 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 UGGT2Q9NYU1 1516 aa19.2■□□□□ 0.66
COL4A3BP-203ENST00000380494 CUTAO60888 179 aa19.19■□□□□ 0.66
COL4A3BP-203ENST00000380494 BRD1O95696 1058 aa19.19■□□□□ 0.66
COL4A3BP-203ENST00000380494 HDAC9Q9UKV0 1011 aa19.19■□□□□ 0.66
COL4A3BP-203ENST00000380494 SYNRGQ9UMZ2 1314 aa19.19■□□□□ 0.66
COL4A3BP-203ENST00000380494 SNRPA1P09661 255 aaKnown RBP19.19■□□□□ 0.66
COL4A3BP-203ENST00000380494 ARHGAP24Q8N264 748 aa19.19■□□□□ 0.66
COL4A3BP-203ENST00000380494 DDX23Q9BUQ8 820 aaKnown RBP19.19■□□□□ 0.66
COL4A3BP-203ENST00000380494 CHPF2Q9P2E5 772 aa19.19■□□□□ 0.66
COL4A3BP-203ENST00000380494 KRT79Q5XKE5 535 aa19.19■□□□□ 0.66
COL4A3BP-203ENST00000380494 ANKRD13DQ6ZTN6 518 aa19.19■□□□□ 0.66
COL4A3BP-203ENST00000380494 ATP6V1AP38606 617 aa19.19■□□□□ 0.66
COL4A3BP-203ENST00000380494 CCDC63Q8NA47 563 aa19.19■□□□□ 0.66
COL4A3BP-203ENST00000380494 SNX14Q9Y5W7 946 aa19.19■□□□□ 0.66
COL4A3BP-203ENST00000380494 BLMP54132 1417 aaPredicted RBP19.19■□□□□ 0.66
COL4A3BP-203ENST00000380494 MAP7D1Q3KQU3 841 aa19.18■□□□□ 0.66
COL4A3BP-203ENST00000380494 TMEM63CQ9P1W3 806 aa19.18■□□□□ 0.66
COL4A3BP-203ENST00000380494 ANKIB1Q9P2G1 1089 aa19.18■□□□□ 0.66
COL4A3BP-203ENST00000380494 MRVI1Q9Y6F6 885 aa19.18■□□□□ 0.66
COL4A3BP-203ENST00000380494 ARID5AQ03989 594 aa19.18■□□□□ 0.66
COL4A3BP-203ENST00000380494 HEATR3Q7Z4Q2 680 aa19.18■□□□□ 0.66
COL4A3BP-203ENST00000380494 NOC4LQ9BVI4 516 aaKnown RBP19.18■□□□□ 0.66
COL4A3BP-203ENST00000380494 MED4Q9NPJ6 270 aa19.18■□□□□ 0.66
COL4A3BP-203ENST00000380494 KCNH3Q9ULD8 1083 aa19.18■□□□□ 0.66
COL4A3BP-203ENST00000380494 MSH6P52701 1360 aa19.17■□□□□ 0.66
COL4A3BP-203ENST00000380494 SLC8A1P32418 973 aa19.17■□□□□ 0.66
COL4A3BP-203ENST00000380494 NAA16Q6N069 864 aaPredicted RBP19.17■□□□□ 0.66
COL4A3BP-203ENST00000380494 DTHD1Q6ZMT9 781 aa19.17■□□□□ 0.66
COL4A3BP-203ENST00000380494 KLHL34Q8N239 644 aa19.17■□□□□ 0.66
COL4A3BP-203ENST00000380494 ATP6V0A2Q9Y487 856 aa19.17■□□□□ 0.66
COL4A3BP-203ENST00000380494 CSRNP2Q9H175 543 aa19.17■□□□□ 0.66
COL4A3BP-203ENST00000380494 VAT1LQ9HCJ6 419 aa19.17■□□□□ 0.66
COL4A3BP-203ENST00000380494 ITSN2Q9NZM3 1697 aa19.17■□□□□ 0.66
COL4A3BP-203ENST00000380494 GADD45BO75293 160 aaPredicted RBP19.17■□□□□ 0.66
COL4A3BP-203ENST00000380494 PLCD1P51178 756 aa19.17■□□□□ 0.66
COL4A3BP-203ENST00000380494 KIF24Q5T7B8 1368 aa19.17■□□□□ 0.66
COL4A3BP-203ENST00000380494 TMEM110-MUSTN1A8MSY1 372 aa19.17■□□□□ 0.66
COL4A3BP-203ENST00000380494 SSH2Q76I76 1423 aa19.17■□□□□ 0.66
COL4A3BP-203ENST00000380494 PTCD1O75127 700 aaKnown RBP19.16■□□□□ 0.66
COL4A3BP-203ENST00000380494 TSPY3P0CV98 308 aa19.16■□□□□ 0.66
COL4A3BP-203ENST00000380494 TSPY8P0CW00 308 aa19.16■□□□□ 0.66
COL4A3BP-203ENST00000380494 NAP1L4Q99733 375 aaKnown RBP19.16■□□□□ 0.66
COL4A3BP-203ENST00000380494 CCT6AP40227 531 aaKnown RBP19.16■□□□□ 0.66
COL4A3BP-203ENST00000380494 CCDC25Q86WR0 208 aa19.16■□□□□ 0.66
COL4A3BP-203ENST00000380494 FAM71BQ8TC56 605 aa19.16■□□□□ 0.66
COL4A3BP-203ENST00000380494 SLC27A2O14975 620 aa19.16■□□□□ 0.66
COL4A3BP-203ENST00000380494 CCDC38Q502W7 563 aa19.16■□□□□ 0.66
COL4A3BP-203ENST00000380494 CCDC97Q96F63 343 aaPredicted RBP19.16■□□□□ 0.66
COL4A3BP-203ENST00000380494 NPC1L1Q9UHC9 1359 aa19.16■□□□□ 0.66
COL4A3BP-203ENST00000380494 NAPAP54920 295 aa19.16■□□□□ 0.66
COL4A3BP-203ENST00000380494 FCHSD1Q86WN1 690 aa19.16■□□□□ 0.66
COL4A3BP-203ENST00000380494 IFNL2Q8IZJ0 200 aa19.16■□□□□ 0.66
COL4A3BP-203ENST00000380494 CDC25BP30305 580 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms