RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SSX2IPQ9Y2D8 614 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 MAPKBP1O60336 1514 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 ERICH4A6NGS2 130 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 TMEM110-MUSTN1A8MSY1 372 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 TAF12Q16514 161 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 EHBP1Q8NDI1 1231 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 LRRC45Q96CN5 670 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 PLVAPQ9BX97 442 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 SPAG1Q07617 926 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 SMC1AQ14683 1233 aaKnown RBP15.44■□□□□ 0.06
GPC6-201ENST00000377047 AOPEPQ8N6M6 819 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 DACT1Q9NYF0 836 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 PIK3C2GO75747 1445 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 PTGS1P23219 599 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 GNG11P61952 73 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 LETM2Q2VYF4 491 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 TTC12Q9H892 705 aaPredicted RBP15.44■□□□□ 0.06
GPC6-201ENST00000377047 RAD50Q92878 1312 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 MSL1Q68DK7 614 aa15.43■□□□□ 0.06
GPC6-201ENST00000377047 MAATS1Q7Z4T9 603 aa15.43■□□□□ 0.06
GPC6-201ENST00000377047 WDR66Q8TBY9 1149 aa15.43■□□□□ 0.06
GPC6-201ENST00000377047 CHMP2AO43633 222 aa15.43■□□□□ 0.06
GPC6-201ENST00000377047 NOD1Q9Y239 953 aa15.43■□□□□ 0.06
GPC6-201ENST00000377047 IKBKGQ9Y6K9 419 aa15.43■□□□□ 0.06
GPC6-201ENST00000377047 EEF2P13639 858 aaKnown RBP15.43■□□□□ 0.06
GPC6-201ENST00000377047 CHMLP26374 656 aa15.43■□□□□ 0.06
GPC6-201ENST00000377047 INCENPQ9NQS7 918 aa15.43■□□□□ 0.06
GPC6-201ENST00000377047 TCP10Q12799 353 aa15.43■□□□□ 0.06
GPC6-201ENST00000377047 NIM1KQ8IY84 436 aa15.43■□□□□ 0.06
GPC6-201ENST00000377047 ZSWIM4Q9H7M6 989 aa15.43■□□□□ 0.06
GPC6-201ENST00000377047 PLEKHM2Q8IWE5 1019 aa15.42■□□□□ 0.06
GPC6-201ENST00000377047 DBNDD2Q9BQY9 259 aa15.42■□□□□ 0.06
GPC6-201ENST00000377047 GIGYF2Q6Y7W6 1299 aaKnown RBP15.42■□□□□ 0.06
GPC6-201ENST00000377047 NAP1L4Q99733 375 aaKnown RBP15.42■□□□□ 0.06
GPC6-201ENST00000377047 ZBTB40Q9NUA8 1239 aa15.42■□□□□ 0.06
GPC6-201ENST00000377047 UVSSAQ2YD98 709 aa15.42■□□□□ 0.06
GPC6-201ENST00000377047 MRPS9P82933 396 aaKnown RBP15.42■□□□□ 0.06
GPC6-201ENST00000377047 ZNF174Q15697 407 aa15.42■□□□□ 0.06
GPC6-201ENST00000377047 KLHL40Q2TBA0 621 aa15.42■□□□□ 0.06
GPC6-201ENST00000377047 BABAM1Q9NWV8 329 aa15.42■□□□□ 0.06
GPC6-201ENST00000377047 IVNS1ABPQ9Y6Y0 642 aa15.42■□□□□ 0.06
GPC6-201ENST00000377047 BICDL2A1A5D9 508 aa15.41■□□□□ 0.06
GPC6-201ENST00000377047 POTEB2H3BUK9 544 aa15.41■□□□□ 0.06
GPC6-201ENST00000377047 HARSP12081 509 aaKnown RBP15.41■□□□□ 0.06
GPC6-201ENST00000377047 STX17P56962 302 aa15.41■□□□□ 0.06
GPC6-201ENST00000377047 EAPPQ56P03 285 aaPredicted RBP15.41■□□□□ 0.06
GPC6-201ENST00000377047 DNAJC25Q9H1X3 360 aa15.41■□□□□ 0.06
GPC6-201ENST00000377047 CFAP43Q8NDM7 1665 aa15.41■□□□□ 0.06
GPC6-201ENST00000377047 OTUD6BQ8N6M0 293 aa15.41■□□□□ 0.06
GPC6-201ENST00000377047 MYCLP12524 364 aaPredicted RBP15.4■□□□□ 0.06
GPC6-201ENST00000377047 PBRM1Q86U86 1689 aa15.4■□□□□ 0.06
GPC6-201ENST00000377047 VWA3AA6NCI4 1184 aa15.4■□□□□ 0.06
GPC6-201ENST00000377047 ALDH1B1P30837 517 aa15.4■□□□□ 0.06
GPC6-201ENST00000377047 LRSAM1Q6UWE0 723 aa15.4■□□□□ 0.06
GPC6-201ENST00000377047 BRAPQ7Z569 592 aa15.4■□□□□ 0.06
GPC6-201ENST00000377047 GPHNQ9NQX3 736 aaPredicted RBP15.4■□□□□ 0.06
GPC6-201ENST00000377047 LPIN2Q92539 896 aa15.4■□□□□ 0.06
GPC6-201ENST00000377047 HOOK2Q96ED9 719 aa15.4■□□□□ 0.06
GPC6-201ENST00000377047 SUCLG2Q96I99 432 aa15.4■□□□□ 0.06
GPC6-201ENST00000377047 USP19O94966 1318 aa15.4■□□□□ 0.06
GPC6-201ENST00000377047 PPIP5K2O43314 1243 aa15.4■□□□□ 0.06
GPC6-201ENST00000377047 PRDM1O75626 825 aa15.4■□□□□ 0.06
GPC6-201ENST00000377047 PDE6BP35913 854 aa15.39■□□□□ 0.05
GPC6-201ENST00000377047 APBB1IPQ7Z5R6 666 aaPredicted RBP15.39■□□□□ 0.05
GPC6-201ENST00000377047 NEK11Q8NG66 645 aa15.39■□□□□ 0.05
GPC6-201ENST00000377047 HOXB7P09629 217 aa15.39■□□□□ 0.05
GPC6-201ENST00000377047 SELENOOQ9BVL4 669 aa15.39■□□□□ 0.05
GPC6-201ENST00000377047 CCT6AP40227 531 aaKnown RBP15.39■□□□□ 0.05
GPC6-201ENST00000377047 DCAF17Q5H9S7 520 aaPredicted RBP15.39■□□□□ 0.05
GPC6-201ENST00000377047 CEP135Q66GS9 1140 aa15.39■□□□□ 0.05
GPC6-201ENST00000377047 CTR9Q6PD62 1173 aa15.39■□□□□ 0.05
GPC6-201ENST00000377047 BEGAINQ9BUH8 593 aa15.39■□□□□ 0.05
GPC6-201ENST00000377047 KIF4AO95239 1232 aa15.39■□□□□ 0.05
GPC6-201ENST00000377047 UBXN1Q04323 297 aa15.39■□□□□ 0.05
GPC6-201ENST00000377047 BRDTQ58F21 947 aaPredicted RBP15.39■□□□□ 0.05
GPC6-201ENST00000377047 CCDC50Q8IVM0 306 aa15.39■□□□□ 0.05
GPC6-201ENST00000377047 CEP83Q9Y592 693 aa15.39■□□□□ 0.05
GPC6-201ENST00000377047 GPAA1O43292 621 aa15.39■□□□□ 0.05
GPC6-201ENST00000377047 CCNT1O60563 726 aaKnown RBP15.39■□□□□ 0.05
GPC6-201ENST00000377047 CALRP27797 417 aaKnown RBP15.39■□□□□ 0.05
GPC6-201ENST00000377047 PPP1R14CQ8TAE6 165 aa15.39■□□□□ 0.05
GPC6-201ENST00000377047 NOP56O00567 594 aaKnown RBP15.38■□□□□ 0.05
GPC6-201ENST00000377047 SV2BQ7L1I2 683 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 WDR70Q9NW82 654 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 BCS1LQ9Y276 419 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 MROH5Q6ZUA9 1318 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 CPA1P15085 419 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 GSTA5Q7RTV2 222 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 CCDC65Q8IXS2 484 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 APPBP2Q92624 585 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 POLR3GO15318 223 aaPredicted RBP15.38■□□□□ 0.05
GPC6-201ENST00000377047 SPATA5Q8NB90 893 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 RNF216Q9NWF9 866 aaPredicted RBP15.38■□□□□ 0.05
GPC6-201ENST00000377047 PRPHP41219 470 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 MAPKAPK5Q8IW41 473 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 CCDC169A6NNP5 214 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 ZBED4O75132 1171 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 TERF1P54274 439 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 CTDSPL2Q05D32 466 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 GRIPAP1Q4V328 841 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms