RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 MBD4O95243 580 aa16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 CAVIN2O95810 425 aa16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ITGA6P23229 1130 aa16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 KIF4BQ2VIQ3 1234 aa16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 FANCLQ9NW38 375 aa16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 CBFA2T2O43439 604 aa16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 PHACTR2O75167 634 aa16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 CASQ1P31415 396 aa16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 NACAP1Q9BZK3 213 aa16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 RCOR1Q9UKL0 485 aa16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 RIMS1Q86UR5 1692 aaKnown RBP16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 KNDC1Q76NI1 1749 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 UBE2Q2LH0YL09 131 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 STARD3NLO95772 234 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 TSR1Q2NL82 804 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 MFSD6Q6ZSS7 791 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 CABP5Q9NP86 173 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 IFT172Q9UG01 1749 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 CARMIL3Q8ND23 1372 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ERBB3P21860 1342 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 BTBD18B2RXH4 712 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 CCDC24Q8N4L8 307 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ZNF397Q8NF99 534 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 SPTLC3Q9NUV7 552 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ADALQ6DHV7 355 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 SMARCE1Q969G3 411 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ACSBG1Q96GR2 724 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 OGFRQ9NZT2 677 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 SLC4A4Q9Y6R1 1079 aa16.54■□□□□ 0.24
TNFRSF1B-201ENST00000376259 DLC1Q96QB1 1528 aa16.53■□□□□ 0.24
TNFRSF1B-201ENST00000376259 DNA2P51530 1060 aa16.53■□□□□ 0.24
TNFRSF1B-201ENST00000376259 PDIA6Q15084 440 aa16.53■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1B-201ENST00000376259 FBXO18Q8NFZ0 1043 aa16.53■□□□□ 0.24
TNFRSF1B-201ENST00000376259 HINFPQ9BQA5 517 aa16.53■□□□□ 0.24
TNFRSF1B-201ENST00000376259 LLPHQ9BRT6 129 aaKnown RBP16.53■□□□□ 0.24
TNFRSF1B-201ENST00000376259 MAP3K12Q12852 859 aa16.53■□□□□ 0.24
TNFRSF1B-201ENST00000376259 NOL10Q9BSC4 688 aaKnown RBP16.53■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ZNF609O15014 1411 aa16.53■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ZNF532Q9HCE3 1301 aa16.53■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ERCC3P19447 782 aa16.52■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ZMYM1Q5SVZ6 1142 aa16.52■□□□□ 0.24
TNFRSF1B-201ENST00000376259 CCDC150Q8NCX0 1101 aa16.52■□□□□ 0.24
TNFRSF1B-201ENST00000376259 KCNH3Q9ULD8 1083 aa16.52■□□□□ 0.24
TNFRSF1B-201ENST00000376259 KIF20BQ96Q89 1820 aa16.52■□□□□ 0.24
TNFRSF1B-201ENST00000376259 IRS4O14654 1257 aaPredicted RBP16.52■□□□□ 0.24
TNFRSF1B-201ENST00000376259 CTDNEP1O95476 244 aa16.52■□□□□ 0.24
TNFRSF1B-201ENST00000376259 CCT6AP40227 531 aaKnown RBP16.52■□□□□ 0.24
TNFRSF1B-201ENST00000376259 APPBP2Q92624 585 aa16.52■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ANGEL1Q9UNK9 670 aaKnown RBP16.52■□□□□ 0.24
TNFRSF1B-201ENST00000376259 NEURL4Q96JN8 1562 aa16.52■□□□□ 0.24
TNFRSF1B-201ENST00000376259 MYL5Q02045 173 aa16.52■□□□□ 0.23
TNFRSF1B-201ENST00000376259 LINC00301Q8NCQ3 95 aa16.52■□□□□ 0.23
TNFRSF1B-201ENST00000376259 CCDC102AQ96A19 550 aa16.52■□□□□ 0.23
TNFRSF1B-201ENST00000376259 SEC31AO94979 1220 aaKnown RBP16.51■□□□□ 0.23
TNFRSF1B-201ENST00000376259 CASP1P29466 404 aa16.51■□□□□ 0.23
TNFRSF1B-201ENST00000376259 DIS3L2Q8IYB7 885 aaKnown RBP16.51■□□□□ 0.23
TNFRSF1B-201ENST00000376259 DSCC1Q9BVC3 393 aa16.51■□□□□ 0.23
TNFRSF1B-201ENST00000376259 NFE2L3Q9Y4A8 694 aa16.51■□□□□ 0.23
TNFRSF1B-201ENST00000376259 XBP1P17861 261 aa16.51■□□□□ 0.23
TNFRSF1B-201ENST00000376259 WTAPQ15007 396 aa16.51■□□□□ 0.23
TNFRSF1B-201ENST00000376259 FILIP1LQ4L180 1135 aa16.51■□□□□ 0.23
TNFRSF1B-201ENST00000376259 FBXO38Q6PIJ6 1188 aa16.51■□□□□ 0.23
TNFRSF1B-201ENST00000376259 PLA2G4DQ86XP0 818 aa16.51■□□□□ 0.23
TNFRSF1B-201ENST00000376259 GREM2Q9H772 168 aa16.51■□□□□ 0.23
TNFRSF1B-201ENST00000376259 PHKA1P46020 1223 aa16.51■□□□□ 0.23
TNFRSF1B-201ENST00000376259 PCDHA5Q9Y5H7 936 aa16.51■□□□□ 0.23
TNFRSF1B-201ENST00000376259 NBPF26B4DH59 902 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 FOXN1O15353 648 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 NAP1L1P55209 391 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 EVCP57679 992 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 RTN1Q16799 776 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 NBPF14Q5TI25 921 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 NBPF10Q6P3W6 841 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 NBPF15Q8N660 670 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 ASAP1Q9ULH1 1129 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 TMEM232C9JQI7 657 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 MARCH6O60337 910 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 PPARDQ03181 441 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 SMYD4Q8IYR2 804 aaPredicted RBP16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 TRIM34Q9BYJ4 488 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 ZSCAN12O43309 604 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 RHOXF2BP0C7M4 288 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 ANKRD20A12PQ8NF67 263 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 MRFAP1L1Q96HT8 127 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 RHOXF2Q9BQY4 288 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 C19orf44Q9H6X5 657 aa16.5■□□□□ 0.23
TNFRSF1B-201ENST00000376259 KIF28PB7ZC32 967 aa16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 PRKAB2O43741 272 aa16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 IQCB1Q15051 598 aa16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 ZNF174Q15697 407 aa16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 CAGE1Q8TC20 777 aa16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 ERO1AQ96HE7 468 aa16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 SENP2Q9HC62 589 aa16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 NR5A1Q13285 461 aa16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 FKBP15Q5T1M5 1219 aa16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 GOLGA6L1Q8N7Z2 621 aa16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 NUP88Q99567 741 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 CCDC66A2RUB6 948 aa16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 KIF2AO00139 706 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms