RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 TTC12Q9H892 705 aaPredicted RBP19.44■□□□□ 0.7
MCF2L-203ENST00000375604 NUP153P49790 1475 aaKnown RBP19.44■□□□□ 0.7
MCF2L-203ENST00000375604 MAPKBP1O60336 1514 aa19.44■□□□□ 0.7
MCF2L-203ENST00000375604 KRT5P13647 590 aa19.44■□□□□ 0.7
MCF2L-203ENST00000375604 MCM3P25205 808 aa19.43■□□□□ 0.7
MCF2L-203ENST00000375604 GUCA1BQ9UMX6 200 aa19.43■□□□□ 0.7
MCF2L-203ENST00000375604 TBC1D7Q9P0N9 293 aa19.43■□□□□ 0.7
MCF2L-203ENST00000375604 KLHL40Q2TBA0 621 aa19.43■□□□□ 0.7
MCF2L-203ENST00000375604 PSMA7O14818 248 aa19.43■□□□□ 0.7
MCF2L-203ENST00000375604 GNAT2P19087 354 aa19.43■□□□□ 0.7
MCF2L-203ENST00000375604 HIBADHP31937 336 aaKnown RBP19.43■□□□□ 0.7
MCF2L-203ENST00000375604 ACTN2P35609 894 aa19.43■□□□□ 0.7
MCF2L-203ENST00000375604 IKBKGQ9Y6K9 419 aa19.43■□□□□ 0.7
MCF2L-203ENST00000375604 RAD51AP2Q09MP3 1159 aa19.43■□□□□ 0.7
MCF2L-203ENST00000375604 DTHD1Q6ZMT9 781 aa19.42■□□□□ 0.7
MCF2L-203ENST00000375604 TEX14Q8IWB6 1497 aa19.42■□□□□ 0.7
MCF2L-203ENST00000375604 GNAQP50148 359 aa19.42■□□□□ 0.7
MCF2L-203ENST00000375604 TNNI3KQ59H18 835 aa19.42■□□□□ 0.7
MCF2L-203ENST00000375604 FPGT-TNNI3KV9GXZ4 949 aa19.42■□□□□ 0.7
MCF2L-203ENST00000375604 YTHDC2Q9H6S0 1430 aaKnown RBP19.42■□□□□ 0.7
MCF2L-203ENST00000375604 BIVM-ERCC5R4GMW8 1640 aa19.42■□□□□ 0.7
MCF2L-203ENST00000375604 HSF2BPO75031 334 aa19.42■□□□□ 0.7
MCF2L-203ENST00000375604 PLCB3Q01970 1234 aa19.42■□□□□ 0.7
MCF2L-203ENST00000375604 KRT9P35527 623 aa19.41■□□□□ 0.7
MCF2L-203ENST00000375604 SUCLG2Q96I99 432 aa19.41■□□□□ 0.7
MCF2L-203ENST00000375604 IFNKQ9P0W0 207 aa19.41■□□□□ 0.7
MCF2L-203ENST00000375604 USP19O94966 1318 aa19.41■□□□□ 0.7
MCF2L-203ENST00000375604 STAMBPO95630 424 aa19.41■□□□□ 0.7
MCF2L-203ENST00000375604 TYRO3Q06418 890 aa19.41■□□□□ 0.7
MCF2L-203ENST00000375604 TTC41PQ6P2S7 1318 aa19.41■□□□□ 0.7
MCF2L-203ENST00000375604 CTTNBP2Q8WZ74 1663 aa19.41■□□□□ 0.7
MCF2L-203ENST00000375604 CFAP65Q6ZU64 1925 aaKnown RBP19.4■□□□□ 0.7
MCF2L-203ENST00000375604 CCDC169A6NNP5 214 aa19.4■□□□□ 0.7
MCF2L-203ENST00000375604 RNASE9P60153 205 aaKnown RBP19.4■□□□□ 0.7
MCF2L-203ENST00000375604 DHX32Q7L7V1 743 aaKnown RBP19.4■□□□□ 0.7
MCF2L-203ENST00000375604 CMTR1Q8N1G2 835 aaKnown RBP19.4■□□□□ 0.7
MCF2L-203ENST00000375604 TSNARE1Q96NA8 513 aa19.4■□□□□ 0.7
MCF2L-203ENST00000375604 PABPN1LA6NDY0 278 aaKnown RBP19.4■□□□□ 0.7
MCF2L-203ENST00000375604 EYA3Q99504 573 aa19.4■□□□□ 0.7
MCF2L-203ENST00000375604 DCTPP1Q9H773 170 aa19.4■□□□□ 0.7
MCF2L-203ENST00000375604 CCDC63Q8NA47 563 aa19.4■□□□□ 0.7
MCF2L-203ENST00000375604 FAM47AQ5JRC9 791 aa19.4■□□□□ 0.7
MCF2L-203ENST00000375604 APBB1IPQ7Z5R6 666 aaPredicted RBP19.4■□□□□ 0.7
MCF2L-203ENST00000375604 CTAGE1Q96RT6 745 aa19.4■□□□□ 0.7
MCF2L-203ENST00000375604 DENND2AQ9ULE3 1009 aa19.4■□□□□ 0.7
MCF2L-203ENST00000375604 FAM173BQ6P4H8 233 aa19.4■□□□□ 0.7
MCF2L-203ENST00000375604 CEP63Q96MT8 703 aa19.4■□□□□ 0.7
MCF2L-203ENST00000375604 NEMFO60524 1076 aa19.39■□□□□ 0.7
MCF2L-203ENST00000375604 CCDC175P0C221 793 aa19.39■□□□□ 0.7
MCF2L-203ENST00000375604 EAPPQ56P03 285 aaPredicted RBP19.39■□□□□ 0.7
MCF2L-203ENST00000375604 GGA1Q9UJY5 639 aa19.39■□□□□ 0.7
MCF2L-203ENST00000375604 SLC27A2O14975 620 aa19.39■□□□□ 0.69
MCF2L-203ENST00000375604 CYLC1P35663 651 aaPredicted RBP19.39■□□□□ 0.69
MCF2L-203ENST00000375604 MAPKAPK5Q8IW41 473 aa19.39■□□□□ 0.69
MCF2L-203ENST00000375604 PHKBQ93100 1093 aa19.39■□□□□ 0.69
MCF2L-203ENST00000375604 PPP1R9BQ96SB3 815 aa19.39■□□□□ 0.69
MCF2L-203ENST00000375604 PICK1Q9NRD5 415 aa19.39■□□□□ 0.69
MCF2L-203ENST00000375604 ZBTB40Q9NUA8 1239 aa19.39■□□□□ 0.69
MCF2L-203ENST00000375604 CPXCR1Q8N123 301 aa19.39■□□□□ 0.69
MCF2L-203ENST00000375604 IMPG2Q9BZV3 1241 aa19.39■□□□□ 0.69
MCF2L-203ENST00000375604 MCM6Q14566 821 aa19.39■□□□□ 0.69
MCF2L-203ENST00000375604 DNAJC21Q5F1R6 531 aaKnown RBP19.39■□□□□ 0.69
MCF2L-203ENST00000375604 TXKP42681 527 aa19.39■□□□□ 0.69
MCF2L-203ENST00000375604 CCDC25Q86WR0 208 aa19.39■□□□□ 0.69
MCF2L-203ENST00000375604 PLBD2Q8NHP8 589 aa19.39■□□□□ 0.69
MCF2L-203ENST00000375604 TGFBRAP1Q8WUH2 860 aa19.39■□□□□ 0.69
MCF2L-203ENST00000375604 IFT81Q8WYA0 676 aa19.39■□□□□ 0.69
MCF2L-203ENST00000375604 V9GY48 417 aaPredicted RBP19.39■□□□□ 0.69
MCF2L-203ENST00000375604 EIF4G3O43432 1585 aaKnown RBP19.39■□□□□ 0.69
MCF2L-203ENST00000375604 APBA3O96018 575 aa19.38■□□□□ 0.69
MCF2L-203ENST00000375604 NEK11Q8NG66 645 aa19.38■□□□□ 0.69
MCF2L-203ENST00000375604 MRRFQ96E11 262 aaKnown RBP19.38■□□□□ 0.69
MCF2L-203ENST00000375604 METTL22Q9BUU2 404 aaPredicted RBP19.38■□□□□ 0.69
MCF2L-203ENST00000375604 STK32BQ9NY57 414 aa19.38■□□□□ 0.69
MCF2L-203ENST00000375604 NCAPH2Q6IBW4 605 aa19.38■□□□□ 0.69
MCF2L-203ENST00000375604 SOS1Q07889 1333 aaPredicted RBP19.38■□□□□ 0.69
MCF2L-203ENST00000375604 RHOXF2BP0C7M4 288 aa19.38■□□□□ 0.69
MCF2L-203ENST00000375604 PUM3Q15397 648 aaKnown RBP19.38■□□□□ 0.69
MCF2L-203ENST00000375604 SELENOSQ9BQE4 189 aa19.38■□□□□ 0.69
MCF2L-203ENST00000375604 RHOXF2Q9BQY4 288 aa19.38■□□□□ 0.69
MCF2L-203ENST00000375604 USP26Q9BXU7 913 aa19.38■□□□□ 0.69
MCF2L-203ENST00000375604 CCDC114Q96M63 670 aa19.37■□□□□ 0.69
MCF2L-203ENST00000375604 PNMA6EA0A0J9YXQ4 647 aa19.37■□□□□ 0.69
MCF2L-203ENST00000375604 IFI16Q16666 785 aaKnown RBP19.37■□□□□ 0.69
MCF2L-203ENST00000375604 DPP8Q6V1X1 898 aaPredicted RBP19.37■□□□□ 0.69
MCF2L-203ENST00000375604 CCDC172P0C7W6 258 aa19.37■□□□□ 0.69
MCF2L-203ENST00000375604 PLCG2P16885 1265 aa19.37■□□□□ 0.69
MCF2L-203ENST00000375604 LONRF3Q496Y0 759 aa19.37■□□□□ 0.69
MCF2L-203ENST00000375604 ZNF569Q5MCW4 686 aa19.37■□□□□ 0.69
MCF2L-203ENST00000375604 KCNQ3O43525 872 aa19.37■□□□□ 0.69
MCF2L-203ENST00000375604 NCBP1Q09161 790 aaKnown RBP19.37■□□□□ 0.69
MCF2L-203ENST00000375604 EDC3Q96F86 508 aaKnown RBP19.37■□□□□ 0.69
MCF2L-203ENST00000375604 FERMT1Q9BQL6 677 aa19.37■□□□□ 0.69
MCF2L-203ENST00000375604 SLC52A2Q9HAB3 445 aa19.36■□□□□ 0.69
MCF2L-203ENST00000375604 USP21Q9UK80 565 aa19.36■□□□□ 0.69
MCF2L-203ENST00000375604 TAF12Q16514 161 aa19.36■□□□□ 0.69
MCF2L-203ENST00000375604 DNAJC10Q8IXB1 793 aa19.36■□□□□ 0.69
MCF2L-203ENST00000375604 CEP112Q8N8E3 955 aa19.36■□□□□ 0.69
MCF2L-203ENST00000375604 TRPM2O94759 1503 aa19.36■□□□□ 0.69
MCF2L-203ENST00000375604 RPS6KB1P23443 525 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms