RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 KAT14Q9H8E8 782 aa10.96□□□□□ -0.65
SF3A3-201ENST00000373019 CFAP45Q9UL16 551 aa10.96□□□□□ -0.65
SF3A3-201ENST00000373019 EBAG9O00559 213 aa10.96□□□□□ -0.66
SF3A3-201ENST00000373019 JAK2O60674 1132 aa10.96□□□□□ -0.66
SF3A3-201ENST00000373019 KINO60870 393 aaKnown RBP10.96□□□□□ -0.66
SF3A3-201ENST00000373019 SLC4A2P04920 1241 aa10.96□□□□□ -0.66
SF3A3-201ENST00000373019 LMOD1P29536 600 aaPredicted RBP10.96□□□□□ -0.66
SF3A3-201ENST00000373019 TOB2Q14106 344 aaPredicted RBP10.96□□□□□ -0.66
SF3A3-201ENST00000373019 NBPF10Q6P3W6 841 aaKnown RBP10.96□□□□□ -0.66
SF3A3-201ENST00000373019 RAB11FIP3O75154 756 aa10.95□□□□□ -0.66
SF3A3-201ENST00000373019 IRAK1P51617 712 aa10.95□□□□□ -0.66
SF3A3-201ENST00000373019 MRPL12P52815 198 aaKnown RBP10.95□□□□□ -0.66
SF3A3-201ENST00000373019 POTEDQ86YR6 584 aa10.95□□□□□ -0.66
SF3A3-201ENST00000373019 FMR1NBQ8N0W7 255 aaPredicted RBP10.95□□□□□ -0.66
SF3A3-201ENST00000373019 CCDC12Q8WUD4 166 aaPredicted RBP10.95□□□□□ -0.66
SF3A3-201ENST00000373019 RIN2Q8WYP3 895 aaPredicted RBP10.95□□□□□ -0.66
SF3A3-201ENST00000373019 ERCC3P19447 782 aa10.95□□□□□ -0.66
SF3A3-201ENST00000373019 CCNHP51946 323 aaPredicted RBP10.95□□□□□ -0.66
SF3A3-201ENST00000373019 GRIK3Q13003 919 aa10.95□□□□□ -0.66
SF3A3-201ENST00000373019 KIAA1468Q9P260 1216 aa10.95□□□□□ -0.66
SF3A3-201ENST00000373019 CAPN7Q9Y6W3 813 aa10.95□□□□□ -0.66
SF3A3-201ENST00000373019 ALKQ9UM73 1620 aa10.95□□□□□ -0.66
SF3A3-201ENST00000373019 TMEM232C9JQI7 657 aa10.95□□□□□ -0.66
SF3A3-201ENST00000373019 H0YHG0 523 aa10.95□□□□□ -0.66
SF3A3-201ENST00000373019 RHOXF2BP0C7M4 288 aa10.95□□□□□ -0.66
SF3A3-201ENST00000373019 SARNPP82979 210 aaKnown RBP10.95□□□□□ -0.66
SF3A3-201ENST00000373019 BRF1Q92994 677 aa10.95□□□□□ -0.66
SF3A3-201ENST00000373019 RHOXF2Q9BQY4 288 aa10.95□□□□□ -0.66
SF3A3-201ENST00000373019 STRCQ7RTU9 1775 aa10.95□□□□□ -0.66
SF3A3-201ENST00000373019 POTEB2H3BUK9 544 aa10.94□□□□□ -0.66
SF3A3-201ENST00000373019 CHUKO15111 745 aa10.94□□□□□ -0.66
SF3A3-201ENST00000373019 IRX1P78414 480 aaPredicted RBP10.94□□□□□ -0.66
SF3A3-201ENST00000373019 VSTM4Q8IW00 320 aa10.94□□□□□ -0.66
SF3A3-201ENST00000373019 ZNF483Q8TF39 744 aaPredicted RBP10.94□□□□□ -0.66
SF3A3-201ENST00000373019 ZNF526Q8TF50 670 aaPredicted RBP10.94□□□□□ -0.66
SF3A3-201ENST00000373019 MRPL44Q9H9J2 332 aaKnown RBP10.94□□□□□ -0.66
SF3A3-201ENST00000373019 TAF6LQ9Y6J9 622 aa10.94□□□□□ -0.66
SF3A3-201ENST00000373019 GRIN2DO15399 1336 aa10.94□□□□□ -0.66
SF3A3-201ENST00000373019 ARHGEF28Q8N1W1 1705 aaKnown RBP10.94□□□□□ -0.66
SF3A3-201ENST00000373019 STK3Q13188 491 aa10.94□□□□□ -0.66
SF3A3-201ENST00000373019 CCDC73Q6ZRK6 1079 aa10.94□□□□□ -0.66
SF3A3-201ENST00000373019 NGDNQ8NEJ9 315 aaKnown RBP10.94□□□□□ -0.66
SF3A3-201ENST00000373019 GOLGA6L9A6NEM1 432 aa10.94□□□□□ -0.66
SF3A3-201ENST00000373019 FOXO3O43524 673 aa10.94□□□□□ -0.66
SF3A3-201ENST00000373019 CALRP27797 417 aaKnown RBP10.94□□□□□ -0.66
SF3A3-201ENST00000373019 CRYMQ14894 314 aa10.94□□□□□ -0.66
SF3A3-201ENST00000373019 AMOTL1Q8IY63 956 aa10.94□□□□□ -0.66
SF3A3-201ENST00000373019 VIPAS39Q9H9C1 493 aa10.94□□□□□ -0.66
SF3A3-201ENST00000373019 CDC23Q9UJX2 597 aa10.94□□□□□ -0.66
SF3A3-201ENST00000373019 A0A0U1RQJ8 604 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 FSBPO95073 299 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 CCT4P50991 539 aaKnown RBP10.93□□□□□ -0.66
SF3A3-201ENST00000373019 ATP2B2Q01814 1243 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 KARSQ15046 597 aaKnown RBP10.93□□□□□ -0.66
SF3A3-201ENST00000373019 ATRIPQ8WXE1 791 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 USP28Q96RU2 1077 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 SLAIN2Q9P270 581 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 ODF2LQ9ULJ1 636 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 ADAMTS2O95450 1211 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 CREB3L3Q68CJ9 461 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 CNTROBQ8N137 903 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 FSIP1Q8NA03 581 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 TRIM6Q9C030 488 aaPredicted RBP10.93□□□□□ -0.66
SF3A3-201ENST00000373019 INTS13Q9NVM9 706 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 IL13P35225 146 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 UBASH3AP57075 661 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 SETQ01105 290 aaPredicted RBP10.93□□□□□ -0.66
SF3A3-201ENST00000373019 TBX2Q13207 712 aaPredicted RBP10.93□□□□□ -0.66
SF3A3-201ENST00000373019 CEP112Q8N8E3 955 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 BAG1Q99933 345 aaPredicted RBP10.93□□□□□ -0.66
SF3A3-201ENST00000373019 DESI2Q9BSY9 194 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 RABEP2Q9H5N1 569 aa10.93□□□□□ -0.66
SF3A3-201ENST00000373019 MAP2P11137 1827 aaKnown RBP10.92□□□□□ -0.66
SF3A3-201ENST00000373019 PPLO60437 1756 aa10.92□□□□□ -0.66
SF3A3-201ENST00000373019 EME2A4GXA9 379 aaPredicted RBP10.92□□□□□ -0.66
SF3A3-201ENST00000373019 AGPSO00116 658 aa10.92□□□□□ -0.66
SF3A3-201ENST00000373019 CHL1O00533 1208 aa10.92□□□□□ -0.66
SF3A3-201ENST00000373019 NF2P35240 595 aa10.92□□□□□ -0.66
SF3A3-201ENST00000373019 BCAS4Q8TDM0 211 aa10.92□□□□□ -0.66
SF3A3-201ENST00000373019 ACBD3Q9H3P7 528 aa10.92□□□□□ -0.66
SF3A3-201ENST00000373019 BSDC1Q9NW68 430 aaPredicted RBP10.92□□□□□ -0.66
SF3A3-201ENST00000373019 HPCAL4Q9UM19 191 aa10.92□□□□□ -0.66
SF3A3-201ENST00000373019 BIN1O00499 593 aa10.92□□□□□ -0.66
SF3A3-201ENST00000373019 STX10O60499 249 aa10.92□□□□□ -0.66
SF3A3-201ENST00000373019 ZNF202O95125 648 aa10.92□□□□□ -0.66
SF3A3-201ENST00000373019 ZKSCAN8Q15776 578 aaPredicted RBP10.92□□□□□ -0.66
SF3A3-201ENST00000373019 MEX3CQ5U5Q3 659 aaKnown RBP10.92□□□□□ -0.66
SF3A3-201ENST00000373019 FMNL3Q8IVF7 1028 aa10.92□□□□□ -0.66
SF3A3-201ENST00000373019 TC2NQ8N9U0 490 aa10.92□□□□□ -0.66
SF3A3-201ENST00000373019 FBXO41Q8TF61 875 aa10.92□□□□□ -0.66
SF3A3-201ENST00000373019 ROBO2Q9HCK4 1378 aa10.92□□□□□ -0.66
SF3A3-201ENST00000373019 ABCC6O95255 1503 aa10.92□□□□□ -0.66
SF3A3-201ENST00000373019 A0A1B0GVL5 298 aa10.91□□□□□ -0.66
SF3A3-201ENST00000373019 ZC3H12AQ5D1E8 599 aaKnown RBP10.91□□□□□ -0.66
SF3A3-201ENST00000373019 WDR93Q6P2C0 686 aa10.91□□□□□ -0.66
SF3A3-201ENST00000373019 IQCA1Q86XH1 822 aa10.91□□□□□ -0.66
SF3A3-201ENST00000373019 NOA1Q8NC60 698 aaKnown RBP10.91□□□□□ -0.66
SF3A3-201ENST00000373019 ALDH8A1Q9H2A2 487 aaPredicted RBP10.91□□□□□ -0.66
SF3A3-201ENST00000373019 RBM8AQ9Y5S9 174 aaKnown RBP10.91□□□□□ -0.66
SF3A3-201ENST00000373019 SOS1Q07889 1333 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms