RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 PARP3Q9Y6F1 533 aa20.14■□□□□ 0.81
CHTOP-203ENST00000368690 A0A1B0GVL5 298 aa20.13■□□□□ 0.81
CHTOP-203ENST00000368690 EVCP57679 992 aa20.13■□□□□ 0.81
CHTOP-203ENST00000368690 REXO1L1PQ8IX06 675 aa20.13■□□□□ 0.81
CHTOP-203ENST00000368690 DBNLQ9UJU6 430 aaKnown RBP20.13■□□□□ 0.81
CHTOP-203ENST00000368690 SPATA31A1Q5TZJ5 1347 aa20.13■□□□□ 0.81
CHTOP-203ENST00000368690 PRAMEF22A3QJZ6 481 aa20.12■□□□□ 0.81
CHTOP-203ENST00000368690 EXOC5O00471 708 aa20.12■□□□□ 0.81
CHTOP-203ENST00000368690 APOBRQ0VD83 1088 aa20.12■□□□□ 0.81
CHTOP-203ENST00000368690 TNNI3KQ59H18 835 aa20.12■□□□□ 0.81
CHTOP-203ENST00000368690 MEX3CQ5U5Q3 659 aaKnown RBP20.12■□□□□ 0.81
CHTOP-203ENST00000368690 DDX21Q9NR30 783 aaKnown RBP eCLIP20.12■□□□□ 0.81
CHTOP-203ENST00000368690 PSD3Q9NYI0 1048 aa20.12■□□□□ 0.81
CHTOP-203ENST00000368690 FPGT-TNNI3KV9GXZ4 949 aa20.12■□□□□ 0.81
CHTOP-203ENST00000368690 PALLDQ8WX93 1383 aa20.12■□□□□ 0.81
CHTOP-203ENST00000368690 NRAPQ86VF7 1730 aa20.12■□□□□ 0.81
CHTOP-203ENST00000368690 SHANK3Q9BYB0 1731 aa20.12■□□□□ 0.81
CHTOP-203ENST00000368690 RAD51AP2Q09MP3 1159 aa20.12■□□□□ 0.81
CHTOP-203ENST00000368690 STK38Q15208 465 aa20.12■□□□□ 0.81
CHTOP-203ENST00000368690 BRAPQ7Z569 592 aa20.12■□□□□ 0.81
CHTOP-203ENST00000368690 EDC3Q96F86 508 aaKnown RBP20.12■□□□□ 0.81
CHTOP-203ENST00000368690 SIL1Q9H173 461 aa20.12■□□□□ 0.81
CHTOP-203ENST00000368690 HELLSQ9NRZ9 838 aa20.12■□□□□ 0.81
CHTOP-203ENST00000368690 FEZ2Q9UHY8 353 aaPredicted RBP20.12■□□□□ 0.81
CHTOP-203ENST00000368690 TBC1D8O95759 1140 aa20.11■□□□□ 0.81
CHTOP-203ENST00000368690 PDIA3P30101 505 aaKnown RBP20.11■□□□□ 0.81
CHTOP-203ENST00000368690 CC2D1AQ6P1N0 951 aaPredicted RBP20.11■□□□□ 0.81
CHTOP-203ENST00000368690 ERCC4Q92889 916 aaPredicted RBP20.11■□□□□ 0.81
CHTOP-203ENST00000368690 LRRC2Q9BYS8 371 aa20.11■□□□□ 0.81
CHTOP-203ENST00000368690 URI1O94763 535 aaPredicted RBP20.11■□□□□ 0.81
CHTOP-203ENST00000368690 ZNF202O95125 648 aa20.11■□□□□ 0.81
CHTOP-203ENST00000368690 CMA1P23946 247 aa20.11■□□□□ 0.81
CHTOP-203ENST00000368690 SF3A1Q15459 793 aaKnown RBP20.11■□□□□ 0.81
CHTOP-203ENST00000368690 SLIT2O94813 1529 aa20.1■□□□□ 0.81
CHTOP-203ENST00000368690 SPATA31A6Q5VVP1 1343 aa20.1■□□□□ 0.81
CHTOP-203ENST00000368690 SPTLC2O15270 562 aa20.1■□□□□ 0.81
CHTOP-203ENST00000368690 JAKMIP3Q5VZ66 844 aa20.1■□□□□ 0.81
CHTOP-203ENST00000368690 CCDC129Q6ZRS4 1044 aa20.1■□□□□ 0.81
CHTOP-203ENST00000368690 KBTBD3Q8NAB2 608 aa20.1■□□□□ 0.81
CHTOP-203ENST00000368690 CARD6Q9BX69 1037 aa20.1■□□□□ 0.81
CHTOP-203ENST00000368690 HSD3B7Q9H2F3 369 aa20.1■□□□□ 0.81
CHTOP-203ENST00000368690 TUBE1Q9UJT0 475 aa20.1■□□□□ 0.81
CHTOP-203ENST00000368690 NAP1L2Q9ULW6 460 aaPredicted RBP20.1■□□□□ 0.81
CHTOP-203ENST00000368690 DISP2A7MBM2 1401 aa20.1■□□□□ 0.81
CHTOP-203ENST00000368690 ERVV-2B6SEH9 535 aa20.1■□□□□ 0.81
CHTOP-203ENST00000368690 ARHGAP6O43182 974 aa20.1■□□□□ 0.81
CHTOP-203ENST00000368690 IGKV5-2P06315 115 aa20.1■□□□□ 0.81
CHTOP-203ENST00000368690 MAP3K9P80192 1104 aa20.1■□□□□ 0.81
CHTOP-203ENST00000368690 ZNF496Q96IT1 587 aaPredicted RBP20.1■□□□□ 0.81
CHTOP-203ENST00000368690 NWD2Q9ULI1 1742 aa20.09■□□□□ 0.81
CHTOP-203ENST00000368690 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.09■□□□□ 0.81
CHTOP-203ENST00000368690 FDPSP14324 419 aaKnown RBP20.09■□□□□ 0.81
CHTOP-203ENST00000368690 FOSBP53539 338 aa20.09■□□□□ 0.81
CHTOP-203ENST00000368690 NKX1-1Q15270 411 aaPredicted RBP20.09■□□□□ 0.81
CHTOP-203ENST00000368690 GORABQ5T7V8 394 aa20.09■□□□□ 0.81
CHTOP-203ENST00000368690 FBXW7Q969H0 707 aa20.09■□□□□ 0.81
CHTOP-203ENST00000368690 KAT6BQ8WYB5 2073 aa20.09■□□□□ 0.81
CHTOP-203ENST00000368690 A0A0G2JS52 829 aa20.08■□□□□ 0.81
CHTOP-203ENST00000368690 CCT2P78371 535 aaKnown RBP20.08■□□□□ 0.81
CHTOP-203ENST00000368690 RSRC2Q7L4I2 434 aaKnown RBP20.08■□□□□ 0.81
CHTOP-203ENST00000368690 VSTM4Q8IW00 320 aa20.08■□□□□ 0.81
CHTOP-203ENST00000368690 RABGGTAQ92696 567 aa20.08■□□□□ 0.81
CHTOP-203ENST00000368690 SPATA31A5Q5VU36 1347 aa20.08■□□□□ 0.81
CHTOP-203ENST00000368690 SPATA31A7Q8IWB4 1347 aa20.08■□□□□ 0.81
CHTOP-203ENST00000368690 NEURL1BA8MQ27 555 aa20.08■□□□□ 0.8
CHTOP-203ENST00000368690 FANCGO15287 622 aa20.08■□□□□ 0.8
CHTOP-203ENST00000368690 OAS2P29728 719 aaKnown RBP20.08■□□□□ 0.8
CHTOP-203ENST00000368690 RFX5P48382 616 aaPredicted RBP20.08■□□□□ 0.8
CHTOP-203ENST00000368690 UBASH3AP57075 661 aa20.08■□□□□ 0.8
CHTOP-203ENST00000368690 NEXNQ0ZGT2 675 aa20.08■□□□□ 0.8
CHTOP-203ENST00000368690 SMC1AQ14683 1233 aaKnown RBP20.08■□□□□ 0.8
CHTOP-203ENST00000368690 DDB1Q16531 1140 aa20.08■□□□□ 0.8
CHTOP-203ENST00000368690 EXOC4Q96A65 974 aa20.08■□□□□ 0.8
CHTOP-203ENST00000368690 SYTL4Q96C24 671 aaPredicted RBP20.08■□□□□ 0.8
CHTOP-203ENST00000368690 SEC62Q99442 399 aaKnown RBP20.08■□□□□ 0.8
CHTOP-203ENST00000368690 ARFGAP3Q9NP61 516 aa20.08■□□□□ 0.8
CHTOP-203ENST00000368690 TMOD3Q9NYL9 352 aa20.08■□□□□ 0.8
CHTOP-203ENST00000368690 THRAP3Q9Y2W1 955 aaKnown RBP20.08■□□□□ 0.8
CHTOP-203ENST00000368690 CLIC4Q9Y696 253 aa20.08■□□□□ 0.8
CHTOP-203ENST00000368690 LRP6O75581 1613 aa20.07■□□□□ 0.8
CHTOP-203ENST00000368690 POLR3GO15318 223 aaPredicted RBP20.07■□□□□ 0.8
CHTOP-203ENST00000368690 MYL5Q02045 173 aa20.07■□□□□ 0.8
CHTOP-203ENST00000368690 GCKRQ14397 625 aa20.07■□□□□ 0.8
CHTOP-203ENST00000368690 AK7Q96M32 723 aa20.07■□□□□ 0.8
CHTOP-203ENST00000368690 FMNL2Q96PY5 1086 aa20.07■□□□□ 0.8
CHTOP-203ENST00000368690 CWC15Q9P013 229 aaKnown RBP20.07■□□□□ 0.8
CHTOP-203ENST00000368690 VWA3AA6NCI4 1184 aa20.07■□□□□ 0.8
CHTOP-203ENST00000368690 E7EWF7 191 aa20.07■□□□□ 0.8
CHTOP-203ENST00000368690 SASH3O75995 380 aa20.07■□□□□ 0.8
CHTOP-203ENST00000368690 LMOD1P29536 600 aaPredicted RBP20.07■□□□□ 0.8
CHTOP-203ENST00000368690 AXDND1Q5T1B0 1012 aaPredicted RBP20.07■□□□□ 0.8
CHTOP-203ENST00000368690 MYSM1Q5VVJ2 828 aa20.07■□□□□ 0.8
CHTOP-203ENST00000368690 KLHDC4Q8TBB5 520 aa20.07■□□□□ 0.8
CHTOP-203ENST00000368690 CDCA7Q9BWT1 371 aaPredicted RBP20.07■□□□□ 0.8
CHTOP-203ENST00000368690 NCOA5Q9HCD5 579 aaKnown RBP20.07■□□□□ 0.8
CHTOP-203ENST00000368690 MRFAP1Q9Y605 127 aa20.07■□□□□ 0.8
CHTOP-203ENST00000368690 GUCY1B3Q02153 619 aa20.06■□□□□ 0.8
CHTOP-203ENST00000368690 TMEM139Q8IV31 216 aa20.06■□□□□ 0.8
CHTOP-203ENST00000368690 FBXO18Q8NFZ0 1043 aa20.06■□□□□ 0.8
CHTOP-203ENST00000368690 NEK11Q8NG66 645 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms