RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 RFC4P35249 363 aa18.66■□□□□ 0.58
SCAF1-201ENST00000360565 PUM3Q15397 648 aaKnown RBP18.66■□□□□ 0.58
SCAF1-201ENST00000360565 GLI2P10070 1586 aa18.65■□□□□ 0.58
SCAF1-201ENST00000360565 USO1O60763 962 aaKnown RBP18.65■□□□□ 0.58
SCAF1-201ENST00000360565 NR1I2O75469 434 aa18.65■□□□□ 0.58
SCAF1-201ENST00000360565 FGFR1OPO95684 399 aaKnown RBP18.65■□□□□ 0.58
SCAF1-201ENST00000360565 HEATR3Q7Z4Q2 680 aa18.65■□□□□ 0.58
SCAF1-201ENST00000360565 LRRC24Q50LG9 513 aa18.65■□□□□ 0.58
SCAF1-201ENST00000360565 TSPYL1Q9H0U9 437 aa18.65■□□□□ 0.58
SCAF1-201ENST00000360565 MCM9Q9NXL9 1143 aa18.65■□□□□ 0.58
SCAF1-201ENST00000360565 PDE8AO60658 829 aa18.65■□□□□ 0.58
SCAF1-201ENST00000360565 TCIRG1Q13488 830 aa18.65■□□□□ 0.58
SCAF1-201ENST00000360565 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.65■□□□□ 0.58
SCAF1-201ENST00000360565 USP28Q96RU2 1077 aa18.65■□□□□ 0.58
SCAF1-201ENST00000360565 HAUS7Q99871 368 aa18.65■□□□□ 0.58
SCAF1-201ENST00000360565 ABCA6Q8N139 1617 aa18.65■□□□□ 0.58
SCAF1-201ENST00000360565 ZNF202O95125 648 aa18.65■□□□□ 0.58
SCAF1-201ENST00000360565 TRIM21P19474 475 aaKnown RBP18.65■□□□□ 0.58
SCAF1-201ENST00000360565 SPAG1Q07617 926 aa18.65■□□□□ 0.58
SCAF1-201ENST00000360565 CTAGE1Q96RT6 745 aa18.65■□□□□ 0.58
SCAF1-201ENST00000360565 NLRP1Q9C000 1473 aa18.65■□□□□ 0.58
SCAF1-201ENST00000360565 HSPD1P10809 573 aaKnown RBP18.64■□□□□ 0.57
SCAF1-201ENST00000360565 DIS3L2Q8IYB7 885 aaKnown RBP18.64■□□□□ 0.57
SCAF1-201ENST00000360565 SMARCC1Q92922 1105 aaPredicted RBP18.64■□□□□ 0.57
SCAF1-201ENST00000360565 RMND1Q9NWS8 449 aa18.64■□□□□ 0.57
SCAF1-201ENST00000360565 ZMYND15Q9H091 742 aa18.64■□□□□ 0.57
SCAF1-201ENST00000360565 PRDM1O75626 825 aa18.64■□□□□ 0.57
SCAF1-201ENST00000360565 GNAQP50148 359 aa18.64■□□□□ 0.57
SCAF1-201ENST00000360565 SPECC1Q5M775 1068 aa18.64■□□□□ 0.57
SCAF1-201ENST00000360565 KCNH3Q9ULD8 1083 aa18.64■□□□□ 0.57
SCAF1-201ENST00000360565 KRT40Q6A162 431 aa18.63■□□□□ 0.57
SCAF1-201ENST00000360565 ZNF589Q86UQ0 364 aaPredicted RBP18.63■□□□□ 0.57
SCAF1-201ENST00000360565 RNF216Q9NWF9 866 aaPredicted RBP18.63■□□□□ 0.57
SCAF1-201ENST00000360565 KRT2P35908 639 aa18.63■□□□□ 0.57
SCAF1-201ENST00000360565 CCDC178Q5BJE1 867 aa18.63■□□□□ 0.57
SCAF1-201ENST00000360565 RILPL1Q5EBL4 403 aa18.63■□□□□ 0.57
SCAF1-201ENST00000360565 KRT222Q8N1A0 295 aa18.63■□□□□ 0.57
SCAF1-201ENST00000360565 ZNF532Q9HCE3 1301 aa18.63■□□□□ 0.57
SCAF1-201ENST00000360565 RIOK3O14730 519 aaKnown RBP18.63■□□□□ 0.57
SCAF1-201ENST00000360565 TMOD2Q9NZR1 351 aa18.63■□□□□ 0.57
SCAF1-201ENST00000360565 CALM1P0DP23 149 aa18.63■□□□□ 0.57
SCAF1-201ENST00000360565 CALM2P0DP24 149 aa18.63■□□□□ 0.57
SCAF1-201ENST00000360565 CALM3P0DP25 149 aa18.63■□□□□ 0.57
SCAF1-201ENST00000360565 PI4K2BQ8TCG2 481 aa18.63■□□□□ 0.57
SCAF1-201ENST00000360565 RTL9Q8NET4 1388 aa18.62■□□□□ 0.57
SCAF1-201ENST00000360565 ERLIN2O94905 339 aa18.62■□□□□ 0.57
SCAF1-201ENST00000360565 PAFAH1B1P43034 410 aa18.62■□□□□ 0.57
SCAF1-201ENST00000360565 NSFL1CQ9UNZ2 370 aaKnown RBP18.62■□□□□ 0.57
SCAF1-201ENST00000360565 MCM7P33993 719 aa18.62■□□□□ 0.57
SCAF1-201ENST00000360565 MAP9Q49MG5 647 aa18.62■□□□□ 0.57
SCAF1-201ENST00000360565 CCDC40Q4G0X9 1142 aa18.62■□□□□ 0.57
SCAF1-201ENST00000360565 EXOC1Q9NV70 894 aa18.62■□□□□ 0.57
SCAF1-201ENST00000360565 POLA2Q14181 598 aa18.62■□□□□ 0.57
SCAF1-201ENST00000360565 KARSQ15046 597 aaKnown RBP18.62■□□□□ 0.57
SCAF1-201ENST00000360565 CYP21A2P08686 494 aa18.61■□□□□ 0.57
SCAF1-201ENST00000360565 CALML3P27482 149 aa18.61■□□□□ 0.57
SCAF1-201ENST00000360565 LPIN2Q92539 896 aa18.61■□□□□ 0.57
SCAF1-201ENST00000360565 ZNF219Q9P2Y4 722 aaPredicted RBP18.61■□□□□ 0.57
SCAF1-201ENST00000360565 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.61■□□□□ 0.573e-7■□□□□ 10.6
SCAF1-201ENST00000360565 A2ML1A8K2U0 1454 aa18.61■□□□□ 0.57
SCAF1-201ENST00000360565 PSMA7O14818 248 aa18.61■□□□□ 0.57
SCAF1-201ENST00000360565 VWA3AA6NCI4 1184 aa18.61■□□□□ 0.57
SCAF1-201ENST00000360565 AKR1B10O60218 316 aa18.61■□□□□ 0.57
SCAF1-201ENST00000360565 CCDC175P0C221 793 aa18.61■□□□□ 0.57
SCAF1-201ENST00000360565 ZNF174Q15697 407 aa18.61■□□□□ 0.57
SCAF1-201ENST00000360565 MYSM1Q5VVJ2 828 aa18.61■□□□□ 0.57
SCAF1-201ENST00000360565 ERVV-2B6SEH9 535 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 PPP1R12BO60237 982 aaPredicted RBP18.6■□□□□ 0.57
SCAF1-201ENST00000360565 ZNF500O60304 480 aaPredicted RBP18.6■□□□□ 0.57
SCAF1-201ENST00000360565 PFKFB2O60825 505 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 LARGE1O95461 756 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 CTDSPL2Q05D32 466 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 TPTE2Q6XPS3 522 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 ZNF274Q96GC6 653 aaPredicted RBP18.6■□□□□ 0.57
SCAF1-201ENST00000360565 SASH1O94885 1247 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 NAPAP54920 295 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 GSTO1P78417 241 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 MYRIPQ8NFW9 859 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 TSC1Q92574 1164 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 POLR2DO15514 142 aaKnown RBP18.6■□□□□ 0.57
SCAF1-201ENST00000360565 DEXIO95424 95 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 GTF2F1P35269 517 aaKnown RBP eCLIP18.6■□□□□ 0.579e-7■■□□□ 14.5
SCAF1-201ENST00000360565 FANCCQ00597 558 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 FAM114A1Q8IWE2 563 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 IQUBQ8NA54 791 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 LZTFL1Q9NQ48 299 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 JADE2Q9NQC1 790 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 PPP1R1BQ9UD71 204 aaPredicted RBP18.6■□□□□ 0.57
SCAF1-201ENST00000360565 V9GY48 417 aaPredicted RBP18.6■□□□□ 0.57
SCAF1-201ENST00000360565 ADGRB3O60242 1522 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 FGAP02671 866 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 ADD1P35611 737 aaKnown RBP18.6■□□□□ 0.57
SCAF1-201ENST00000360565 ASIC1P78348 528 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 TCERG1LQ5VWI1 586 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 PUS3Q9BZE2 481 aaKnown RBP18.6■□□□□ 0.57
SCAF1-201ENST00000360565 ARFGAP3Q9NP61 516 aa18.6■□□□□ 0.57
SCAF1-201ENST00000360565 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.59■□□□□ 0.57
SCAF1-201ENST00000360565 KIF20AO95235 890 aa18.59■□□□□ 0.57
SCAF1-201ENST00000360565 F8W031 263 aaPredicted RBP18.58■□□□□ 0.57
SCAF1-201ENST00000360565 IGSF3O75054 1194 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms