RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 CCDC155Q8N6L0 562 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 FAM76AQ8TAV0 307 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 RNMTO43148 476 aaKnown RBP17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 DNAJC21Q5F1R6 531 aaKnown RBP17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 KBTBD3Q8NAB2 608 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 MLKLQ8NB16 471 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 SSH3Q8TE77 659 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 EDC4Q6P2E9 1401 aaKnown RBP17.66■□□□□ 0.42
TRAPPC11-202ENST00000357207 SLC4A8Q2Y0W8 1093 aa17.66■□□□□ 0.42
TRAPPC11-202ENST00000357207 CCDC152Q4G0S7 254 aa17.66■□□□□ 0.42
TRAPPC11-202ENST00000357207 ABCC2Q92887 1545 aa17.66■□□□□ 0.42
TRAPPC11-202ENST00000357207 BICDL2A1A5D9 508 aa17.66■□□□□ 0.42
TRAPPC11-202ENST00000357207 UBE4AQ14139 1066 aa17.66■□□□□ 0.42
TRAPPC11-202ENST00000357207 HOOK3Q86VS8 718 aa17.66■□□□□ 0.42
TRAPPC11-202ENST00000357207 CUL5Q93034 780 aa17.66■□□□□ 0.42
TRAPPC11-202ENST00000357207 USP44Q9H0E7 712 aa17.66■□□□□ 0.42
TRAPPC11-202ENST00000357207 CABP5Q9NP86 173 aa17.66■□□□□ 0.42
TRAPPC11-202ENST00000357207 CCT6AP40227 531 aaKnown RBP17.66■□□□□ 0.42
TRAPPC11-202ENST00000357207 NAPGQ99747 312 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC11-202ENST00000357207 TTF2Q9UNY4 1162 aaKnown RBP17.66■□□□□ 0.42
TRAPPC11-202ENST00000357207 NFE2L3Q9Y4A8 694 aa17.66■□□□□ 0.42
TRAPPC11-202ENST00000357207 TTC6Q86TZ1 520 aa17.65■□□□□ 0.42
TRAPPC11-202ENST00000357207 XPO4Q9C0E2 1151 aaKnown RBP17.65■□□□□ 0.42
TRAPPC11-202ENST00000357207 GCC2Q8IWJ2 1684 aa17.65■□□□□ 0.42
TRAPPC11-202ENST00000357207 EXOC5O00471 708 aa17.65■□□□□ 0.42
TRAPPC11-202ENST00000357207 CUTAO60888 179 aa17.65■□□□□ 0.42
TRAPPC11-202ENST00000357207 STXBP4Q6ZWJ1 553 aa17.65■□□□□ 0.42
TRAPPC11-202ENST00000357207 HEATR3Q7Z4Q2 680 aa17.65■□□□□ 0.42
TRAPPC11-202ENST00000357207 ZNF215Q9UL58 517 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC11-202ENST00000357207 ANGEL1Q9UNK9 670 aaKnown RBP17.65■□□□□ 0.42
TRAPPC11-202ENST00000357207 EYA2O00167 538 aa17.65■□□□□ 0.42
TRAPPC11-202ENST00000357207 TMOD2Q9NZR1 351 aa17.65■□□□□ 0.42
TRAPPC11-202ENST00000357207 RTL9Q8NET4 1388 aa17.65■□□□□ 0.42
TRAPPC11-202ENST00000357207 A0A1B0GUL7 405 aa17.65■□□□□ 0.42
TRAPPC11-202ENST00000357207 CCDC172P0C7W6 258 aa17.65■□□□□ 0.42
TRAPPC11-202ENST00000357207 ZCRB1Q8TBF4 217 aaKnown RBP17.65■□□□□ 0.42
TRAPPC11-202ENST00000357207 DESP17661 470 aa17.64■□□□□ 0.41
TRAPPC11-202ENST00000357207 CFAP58Q5T655 872 aa17.64■□□□□ 0.41
TRAPPC11-202ENST00000357207 TMEM87BQ96K49 555 aa17.64■□□□□ 0.41
TRAPPC11-202ENST00000357207 VPS16Q9H269 839 aa17.64■□□□□ 0.41
TRAPPC11-202ENST00000357207 NR1I2O75469 434 aa17.64■□□□□ 0.41
TRAPPC11-202ENST00000357207 ARID5AQ03989 594 aa17.64■□□□□ 0.41
TRAPPC11-202ENST00000357207 DTHD1Q6ZMT9 781 aa17.64■□□□□ 0.41
TRAPPC11-202ENST00000357207 VWA3AA6NCI4 1184 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 B4E1Z4 1266 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 POLR2DO15514 142 aaKnown RBP17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 MCM7P33993 719 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 NF2P35240 595 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 ABCC10Q5T3U5 1492 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 IP6K1Q92551 441 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 TSPY3P0CV98 308 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 TSPY8P0CW00 308 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 HELBQ8NG08 1087 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 NEK11Q8NG66 645 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 IFT81Q8WYA0 676 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 CCDC121Q6ZUS5 278 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 DIS3L2Q8IYB7 885 aaKnown RBP17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 ZSWIM6Q9HCJ5 1215 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 TBCAO75347 108 aaKnown RBP17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 PTH1RQ03431 593 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 ERCC6LQ2NKX8 1250 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 CNKSR2Q8WXI2 1034 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 SUCLG2Q96I99 432 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 METTL22Q9BUU2 404 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 PLVAPQ9BX97 442 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 KIAA1468Q9P260 1216 aa17.63■□□□□ 0.41
TRAPPC11-202ENST00000357207 ADAMTS12P58397 1594 aa17.62■□□□□ 0.41
TRAPPC11-202ENST00000357207 MAST1Q9Y2H9 1570 aa17.62■□□□□ 0.41
TRAPPC11-202ENST00000357207 RGS12O14924 1447 aa17.62■□□□□ 0.41
TRAPPC11-202ENST00000357207 TBC1D8BQ0IIM8 1120 aa17.62■□□□□ 0.41
TRAPPC11-202ENST00000357207 MAGEB6Q8N7X4 407 aa17.62■□□□□ 0.41
TRAPPC11-202ENST00000357207 APPBP2Q92624 585 aa17.62■□□□□ 0.41
TRAPPC11-202ENST00000357207 NAPAP54920 295 aa17.62■□□□□ 0.41
TRAPPC11-202ENST00000357207 SYCP3Q8IZU3 236 aa17.62■□□□□ 0.41
TRAPPC11-202ENST00000357207 MRFAP1L1Q96HT8 127 aa17.62■□□□□ 0.41
TRAPPC11-202ENST00000357207 TRIM14Q14142 442 aa17.62■□□□□ 0.41
TRAPPC11-202ENST00000357207 ADALQ6DHV7 355 aa17.62■□□□□ 0.41
TRAPPC11-202ENST00000357207 AFAP1L1Q8TED9 768 aa17.62■□□□□ 0.41
TRAPPC11-202ENST00000357207 ASXL2Q76L83 1435 aa17.62■□□□□ 0.41
TRAPPC11-202ENST00000357207 MIGA1Q8NAN2 632 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 LMBR1Q8WVP7 490 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 PLEKHF1Q96S99 279 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 PYCARDQ9ULZ3 195 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 SBNO1A3KN83 1393 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 MAGEB6P1A0A0J9YX57 407 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 ETF1P62495 437 aaKnown RBP17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 ZKSCAN3Q9BRR0 538 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 NSRP1Q9H0G5 558 aaKnown RBP17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 OSBPL3Q9H4L5 887 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 TPCN1Q9ULQ1 816 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 DEXIO95424 95 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 GCP02774 474 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 MTX1Q13505 466 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 CUL4AQ13619 759 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 ZNF174Q15697 407 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 TMTC1Q8IUR5 882 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 ERMNQ8TAM6 284 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 DISP1Q96F81 1524 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 KDM5CP41229 1560 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms