RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ZFYP08048 801 aaPredicted RBP22.52■■□□□ 1.2
EXOSC3-201ENST00000327304 LRRFIP1Q32MZ4 808 aaKnown RBP22.52■■□□□ 1.2
EXOSC3-201ENST00000327304 ZMYM1Q5SVZ6 1142 aa22.52■■□□□ 1.2
EXOSC3-201ENST00000327304 ZSCAN25Q6NSZ9 544 aa22.52■■□□□ 1.2
EXOSC3-201ENST00000327304 NIM1KQ8IY84 436 aa22.52■■□□□ 1.2
EXOSC3-201ENST00000327304 ZGPATQ8N5A5 531 aaKnown RBP22.52■■□□□ 1.2
EXOSC3-201ENST00000327304 ZNF384Q8TF68 577 aa22.52■■□□□ 1.2
EXOSC3-201ENST00000327304 SEC62Q99442 399 aaKnown RBP22.52■■□□□ 1.2
EXOSC3-201ENST00000327304 ANO2Q9NQ90 1003 aa22.52■■□□□ 1.2
EXOSC3-201ENST00000327304 TCRBV5S4A2TA0A5A2 114 aa22.52■■□□□ 1.2
EXOSC3-201ENST00000327304 CERS5Q8N5B7 392 aa22.52■■□□□ 1.2
EXOSC3-201ENST00000327304 TBC1D22AQ8WUA7 517 aa22.52■■□□□ 1.2
EXOSC3-201ENST00000327304 ZNF532Q9HCE3 1301 aa22.51■■□□□ 1.19
EXOSC3-201ENST00000327304 ANAPC15P60006 121 aa22.51■■□□□ 1.19
EXOSC3-201ENST00000327304 SPTY2D1Q68D10 685 aaPredicted RBP22.51■■□□□ 1.19
EXOSC3-201ENST00000327304 MAST2Q6P0Q8 1798 aa22.51■■□□□ 1.19
EXOSC3-201ENST00000327304 USP17L3A6NCW0 530 aa22.5■■□□□ 1.19
EXOSC3-201ENST00000327304 USP17L4A6NCW7 530 aa22.5■■□□□ 1.19
EXOSC3-201ENST00000327304 LDHBP07195 334 aaKnown RBP22.5■■□□□ 1.19
EXOSC3-201ENST00000327304 MECOMQ03112 1051 aa22.5■■□□□ 1.19
EXOSC3-201ENST00000327304 UBE3CQ15386 1083 aa22.5■■□□□ 1.19
EXOSC3-201ENST00000327304 DACT2Q5SW24 774 aa22.5■■□□□ 1.19
EXOSC3-201ENST00000327304 STRIP1Q5VSL9 837 aa22.5■■□□□ 1.19
EXOSC3-201ENST00000327304 USP17L1Q7RTZ2 530 aa22.5■■□□□ 1.19
EXOSC3-201ENST00000327304 OSBP2Q969R2 916 aa22.5■■□□□ 1.19
EXOSC3-201ENST00000327304 IL17RAQ96F46 866 aa22.5■■□□□ 1.19
EXOSC3-201ENST00000327304 ZNRF3Q9ULT6 936 aa22.5■■□□□ 1.19
EXOSC3-201ENST00000327304 APPBP2Q92624 585 aa22.5■■□□□ 1.19
EXOSC3-201ENST00000327304 NSUN4Q96CB9 384 aaKnown RBP22.5■■□□□ 1.19
EXOSC3-201ENST00000327304 PSME4Q14997 1843 aa22.5■■□□□ 1.19
EXOSC3-201ENST00000327304 CCDC88AQ3V6T2 1871 aa22.49■■□□□ 1.19
EXOSC3-201ENST00000327304 MAST3O60307 1309 aa22.49■■□□□ 1.19
EXOSC3-201ENST00000327304 M0R2C6 588 aa22.49■■□□□ 1.19
EXOSC3-201ENST00000327304 CCDC129Q6ZRS4 1044 aa22.49■■□□□ 1.19
EXOSC3-201ENST00000327304 ZNF589Q86UQ0 364 aaPredicted RBP22.49■■□□□ 1.19
EXOSC3-201ENST00000327304 IL27Q8NEV9 243 aa22.49■■□□□ 1.19
EXOSC3-201ENST00000327304 JDP2Q8WYK2 163 aa22.49■■□□□ 1.19
EXOSC3-201ENST00000327304 HELLSQ9NRZ9 838 aa22.49■■□□□ 1.19
EXOSC3-201ENST00000327304 RAD50Q92878 1312 aa22.49■■□□□ 1.19
EXOSC3-201ENST00000327304 RAD17O75943 681 aa22.48■■□□□ 1.19
EXOSC3-201ENST00000327304 CYP7A1P22680 504 aa22.48■■□□□ 1.19
EXOSC3-201ENST00000327304 NAA16Q6N069 864 aaPredicted RBP22.48■■□□□ 1.19
EXOSC3-201ENST00000327304 ADGRA1Q86SQ6 560 aa22.48■■□□□ 1.19
EXOSC3-201ENST00000327304 DZIP1Q86YF9 867 aaKnown RBP22.48■■□□□ 1.19
EXOSC3-201ENST00000327304 PUS7LQ9H0K6 701 aaKnown RBP22.48■■□□□ 1.19
EXOSC3-201ENST00000327304 MCMDC2Q4G0Z9 681 aa22.47■■□□□ 1.19
EXOSC3-201ENST00000327304 GPR162Q16538 588 aa22.47■■□□□ 1.19
EXOSC3-201ENST00000327304 LMNB1P20700 586 aa22.46■■□□□ 1.19
EXOSC3-201ENST00000327304 KIAA1211Q6ZU35 1233 aa22.46■■□□□ 1.19
EXOSC3-201ENST00000327304 SBF1O95248 1867 aa22.46■■□□□ 1.19
EXOSC3-201ENST00000327304 UTRNP46939 3433 aa22.45■■□□□ 1.19
EXOSC3-201ENST00000327304 F8W031 263 aaPredicted RBP22.45■■□□□ 1.19
EXOSC3-201ENST00000327304 K7ELQ4 463 aaPredicted RBP22.45■■□□□ 1.19
EXOSC3-201ENST00000327304 PSMD14O00487 310 aa22.45■■□□□ 1.19
EXOSC3-201ENST00000327304 FKBP1AP62942 108 aaKnown RBP22.45■■□□□ 1.19
EXOSC3-201ENST00000327304 DIXDC1Q155Q3 683 aa22.45■■□□□ 1.19
EXOSC3-201ENST00000327304 LSG1Q9H089 658 aaKnown RBP22.45■■□□□ 1.19
EXOSC3-201ENST00000327304 HSPA4P34932 840 aa22.45■■□□□ 1.18
EXOSC3-201ENST00000327304 CXCL9Q07325 125 aa22.45■■□□□ 1.18
EXOSC3-201ENST00000327304 CCDC171Q6TFL3 1326 aa22.45■■□□□ 1.18
EXOSC3-201ENST00000327304 MIGA1Q8NAN2 632 aa22.45■■□□□ 1.18
EXOSC3-201ENST00000327304 SUGT1Q9Y2Z0 365 aa22.45■■□□□ 1.18
EXOSC3-201ENST00000327304 ST18O60284 1047 aa22.44■■□□□ 1.18
EXOSC3-201ENST00000327304 DICER1Q9UPY3 1922 aaKnown RBP22.43■■□□□ 1.18
EXOSC3-201ENST00000327304 IGSF3O75054 1194 aa22.43■■□□□ 1.18
EXOSC3-201ENST00000327304 VIL1P09327 827 aaKnown RBP22.43■■□□□ 1.18
EXOSC3-201ENST00000327304 TTF2Q9UNY4 1162 aaKnown RBP22.43■■□□□ 1.18
EXOSC3-201ENST00000327304 GPAA1O43292 621 aa22.43■■□□□ 1.18
EXOSC3-201ENST00000327304 MBD4O95243 580 aa22.43■■□□□ 1.18
EXOSC3-201ENST00000327304 CD2BP2O95400 341 aaKnown RBP22.43■■□□□ 1.18
EXOSC3-201ENST00000327304 PTH1RQ03431 593 aa22.43■■□□□ 1.18
EXOSC3-201ENST00000327304 RSBN1LQ6PCB5 846 aaPredicted RBP22.43■■□□□ 1.18
EXOSC3-201ENST00000327304 KIAA0825Q8IV33 1275 aa22.43■■□□□ 1.18
EXOSC3-201ENST00000327304 MYH2Q9UKX2 1941 aa22.42■■□□□ 1.18
EXOSC3-201ENST00000327304 FZD9O00144 591 aa22.42■■□□□ 1.18
EXOSC3-201ENST00000327304 GSTO1P78417 241 aa22.42■■□□□ 1.18
EXOSC3-201ENST00000327304 CIAPIN1Q6FI81 312 aa22.42■■□□□ 1.18
EXOSC3-201ENST00000327304 SLKQ9H2G2 1235 aaPredicted RBP22.42■■□□□ 1.18
EXOSC3-201ENST00000327304 SCNN1DP51172 638 aa22.41■■□□□ 1.18
EXOSC3-201ENST00000327304 VPS53Q5VIR6 699 aa22.41■■□□□ 1.18
EXOSC3-201ENST00000327304 TMED8Q6PL24 325 aaPredicted RBP22.41■■□□□ 1.18
EXOSC3-201ENST00000327304 LCORLQ8N3X6 602 aa22.41■■□□□ 1.18
EXOSC3-201ENST00000327304 AIDAQ96BJ3 306 aa22.41■■□□□ 1.18
EXOSC3-201ENST00000327304 ARMT1Q9H993 441 aa22.41■■□□□ 1.18
EXOSC3-201ENST00000327304 ADAMTSL1Q8N6G6 1762 aa22.41■■□□□ 1.18
EXOSC3-201ENST00000327304 MROH7-TTC4A0A0A0MT08 1334 aa22.41■■□□□ 1.18
EXOSC3-201ENST00000327304 DYNLL1P63167 89 aaKnown RBP22.41■■□□□ 1.18
EXOSC3-201ENST00000327304 GMLQ99445 158 aa22.41■■□□□ 1.18
EXOSC3-201ENST00000327304 ZBTB12Q9Y330 459 aaPredicted RBP22.41■■□□□ 1.18
EXOSC3-201ENST00000327304 ZNF541Q9H0D2 1346 aa22.4■■□□□ 1.18
EXOSC3-201ENST00000327304 MAGEB6P1A0A0J9YX57 407 aa22.4■■□□□ 1.18
EXOSC3-201ENST00000327304 STRBPQ96SI9 672 aaKnown RBP22.4■■□□□ 1.18
EXOSC3-201ENST00000327304 RIOK1Q9BRS2 568 aaKnown RBP22.4■■□□□ 1.18
EXOSC3-201ENST00000327304 RNF181Q9P0P0 153 aa22.4■■□□□ 1.18
EXOSC3-201ENST00000327304 PALD1Q9ULE6 856 aa22.4■■□□□ 1.18
EXOSC3-201ENST00000327304 MYO3BQ8WXR4 1341 aa22.39■■□□□ 1.18
EXOSC3-201ENST00000327304 LDHCP07864 332 aa22.39■■□□□ 1.17
EXOSC3-201ENST00000327304 EIF6P56537 245 aaKnown RBP22.39■■□□□ 1.17
EXOSC3-201ENST00000327304 AATFQ9NY61 560 aaKnown RBP eCLIP22.39■■□□□ 1.17
EXOSC3-201ENST00000327304 GAKO14976 1311 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms