RNA–Protein interactions for RNA: ENST00000324306.10

ZKSCAN1-201, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN1, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-201ENST00000324306 RNF216Q9NWF9 866 aaPredicted RBP10.57□□□□□ -0.72
ZKSCAN1-201ENST00000324306 RANBP6O60518 1105 aaKnown RBP10.57□□□□□ -0.72
ZKSCAN1-201ENST00000324306 KRT2P35908 639 aa10.57□□□□□ -0.72
ZKSCAN1-201ENST00000324306 HSP90AA5PQ58FG0 334 aa10.57□□□□□ -0.72
ZKSCAN1-201ENST00000324306 PUF60Q9UHX1 559 aaKnown RBP10.57□□□□□ -0.72
ZKSCAN1-201ENST00000324306 CFAP221Q4G0U5 840 aa10.57□□□□□ -0.72
ZKSCAN1-201ENST00000324306 ESR2Q92731 530 aa10.57□□□□□ -0.72
ZKSCAN1-201ENST00000324306 CCDC97Q96F63 343 aaPredicted RBP10.57□□□□□ -0.72
ZKSCAN1-201ENST00000324306 SYNCQ9H7C4 482 aa10.57□□□□□ -0.72
ZKSCAN1-201ENST00000324306 TRHP20396 242 aaPredicted RBP10.57□□□□□ -0.72
ZKSCAN1-201ENST00000324306 U2AF2P26368 475 aaKnown RBP eCLIP10.57□□□□□ -0.729e-8■■■□□ 16.9
ZKSCAN1-201ENST00000324306 ASIC1P78348 528 aa10.57□□□□□ -0.72
ZKSCAN1-201ENST00000324306 GUCY1B3Q02153 619 aa10.57□□□□□ -0.72
ZKSCAN1-201ENST00000324306 ZNF444Q8N0Y2 327 aaPredicted RBP10.57□□□□□ -0.72
ZKSCAN1-201ENST00000324306 CABS1Q96KC9 395 aa10.57□□□□□ -0.72
ZKSCAN1-201ENST00000324306 ATP6V0A2Q9Y487 856 aa10.57□□□□□ -0.72
ZKSCAN1-201ENST00000324306 IGSF22Q8N9C0 903 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 DISP3Q9P2K9 1392 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 VIMP08670 466 aaKnown RBP10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 RPL13P26373 211 aaKnown RBP10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 SECISBP2LQ93073 1101 aaKnown RBP10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 LAMC3Q9Y6N6 1575 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 KIF24Q5T7B8 1368 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 PRG4Q92954 1404 aaPredicted RBP10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 GKAP1Q5VSY0 366 aaPredicted RBP10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 RPAINQ86UA6 219 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 MPHOSPH6Q99547 160 aaKnown RBP10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 HPDP32754 393 aaPredicted RBP10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 ZNF622Q969S3 477 aaKnown RBP eCLIP10.56□□□□□ -0.724e-12■■□□□ 13.6
ZKSCAN1-201ENST00000324306 KCNK9Q9NPC2 374 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 GABPB2Q8TAK5 448 aaPredicted RBP10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 SHANK2Q9UPX8 1470 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 KLF18A0A0U1RQI7 1052 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 MINDY4BA8MYZ0 360 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 CETN3O15182 167 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 CCDC63Q8NA47 563 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 SMARCC2Q8TAQ2 1214 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 RAB17Q9H0T7 212 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 MBIPQ9NS73 344 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 BAG3O95817 575 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 USP26Q9BXU7 913 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 TXNDC16Q9P2K2 825 aa10.56□□□□□ -0.72
ZKSCAN1-201ENST00000324306 Q6ZUG5 572 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 BRF1Q92994 677 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 ALDH1L1O75891 902 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 MUM1Q2TAK8 710 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 PPP1R42Q7Z4L9 355 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 KIFAP3Q92845 792 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 RBM42Q9BTD8 480 aaKnown RBP10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 HIP1RO75146 1068 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 PSMC4P43686 418 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 RBSNQ9H1K0 784 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 BCL2L12Q9HB09 334 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 BICD1Q96G01 975 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 SLMAPQ14BN4 828 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 RILPL1Q5EBL4 403 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 DENND2CQ68D51 928 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 CNNM4Q6P4Q7 775 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 GBP7Q8N8V2 638 aaPredicted RBP10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 MLKLQ8NB16 471 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 RBM8AQ9Y5S9 174 aaKnown RBP10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 RHPN1Q8TCX5 695 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 IMPG2Q9BZV3 1241 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 POGZQ7Z3K3 1410 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 PRAG1Q86YV5 1406 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 PLCD1P51178 756 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 SMC1BQ8NDV3 1235 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 KDM2BQ8NHM5 1336 aa10.55□□□□□ -0.72
ZKSCAN1-201ENST00000324306 KAT6BQ8WYB5 2073 aa10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 KIF1CO43896 1103 aaKnown RBP10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 MCM10Q7L590 875 aa10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 ZGPATQ8N5A5 531 aaKnown RBP10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 DCTPP1Q9H773 170 aa10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 CCDC61Q9Y6R9 512 aa10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 P3H4Q92791 437 aa10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 DNMT1P26358 1616 aaKnown RBP10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 AFMP43652 599 aa10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 CRNKL1Q9BZJ0 848 aaKnown RBP10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 NUTM2GQ5VZR2 741 aa10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 TEX13AQ9BXU3 409 aaPredicted RBP10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 ODF2LQ9ULJ1 636 aa10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 COL17A1Q9UMD9 1497 aaPredicted RBP10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 INF2Q27J81 1249 aa10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 ERCC3P19447 782 aa10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 KARSQ15046 597 aaKnown RBP10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 TSPYL2Q9H2G4 693 aaPredicted RBP10.54□□□□□ -0.72
ZKSCAN1-201ENST00000324306 AK2P54819 239 aa10.53□□□□□ -0.72
ZKSCAN1-201ENST00000324306 MYO1AQ9UBC5 1043 aa10.53□□□□□ -0.72
ZKSCAN1-201ENST00000324306 RNF40O75150 1001 aa10.53□□□□□ -0.72
ZKSCAN1-201ENST00000324306 TRIM37O94972 964 aa10.53□□□□□ -0.72
ZKSCAN1-201ENST00000324306 NPC1L1Q9UHC9 1359 aa10.53□□□□□ -0.72
ZKSCAN1-201ENST00000324306 RRS1Q15050 365 aaKnown RBP10.53□□□□□ -0.72
ZKSCAN1-201ENST00000324306 MAIP1Q8WWC4 291 aa10.53□□□□□ -0.72
ZKSCAN1-201ENST00000324306 MRFAP1L1Q96HT8 127 aa10.53□□□□□ -0.72
ZKSCAN1-201ENST00000324306 CAPS2Q9BXY5 557 aa10.53□□□□□ -0.72
ZKSCAN1-201ENST00000324306 ARHGEF11O15085 1522 aa10.53□□□□□ -0.72
ZKSCAN1-201ENST00000324306 DNAJC8O75937 253 aaPredicted RBP10.53□□□□□ -0.72
ZKSCAN1-201ENST00000324306 LDHCP07864 332 aa10.53□□□□□ -0.72
ZKSCAN1-201ENST00000324306 ESCO1Q5FWF5 840 aa10.53□□□□□ -0.72
ZKSCAN1-201ENST00000324306 ZRANB1Q9UGI0 708 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 897.5 ms