RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 DNAJC2Q99543 621 aaKnown RBP11.11□□□□□ -0.63
PDE4D-201ENST00000309641 PDS5AQ29RF7 1337 aaKnown RBP11.11□□□□□ -0.63
PDE4D-201ENST00000309641 SALL1Q9NSC2 1324 aa11.11□□□□□ -0.63
PDE4D-201ENST00000309641 WNT10BO00744 389 aa11.11□□□□□ -0.63
PDE4D-201ENST00000309641 ATP5JP18859 108 aa11.11□□□□□ -0.63
PDE4D-201ENST00000309641 PDE4AP27815 886 aa11.11□□□□□ -0.63
PDE4D-201ENST00000309641 ECHDC1Q9NTX5 307 aa11.11□□□□□ -0.63
PDE4D-201ENST00000309641 GOLIM4O00461 696 aa11.1□□□□□ -0.63
PDE4D-201ENST00000309641 CHGBP05060 677 aa11.1□□□□□ -0.63
PDE4D-201ENST00000309641 LDHBP07195 334 aaKnown RBP11.1□□□□□ -0.63
PDE4D-201ENST00000309641 CRKP46108 304 aa11.1□□□□□ -0.63
PDE4D-201ENST00000309641 CFAP100Q494V2 611 aa11.1□□□□□ -0.63
PDE4D-201ENST00000309641 PI4K2BQ8TCG2 481 aa11.1□□□□□ -0.63
PDE4D-201ENST00000309641 ZBED3Q96IU2 234 aaPredicted RBP11.1□□□□□ -0.63
PDE4D-201ENST00000309641 CCDC136Q96JN2 1154 aa11.1□□□□□ -0.63
PDE4D-201ENST00000309641 PRMT6Q96LA8 375 aaPredicted RBP11.1□□□□□ -0.63
PDE4D-201ENST00000309641 CEP350Q5VT06 3117 aa11.1□□□□□ -0.63
PDE4D-201ENST00000309641 MAP4K4O95819 1239 aaPredicted RBP11.09□□□□□ -0.63
PDE4D-201ENST00000309641 MX1P20591 662 aa11.09□□□□□ -0.63
PDE4D-201ENST00000309641 RBM5P52756 815 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDE4D-201ENST00000309641 MECOMQ03112 1051 aa11.09□□□□□ -0.63
PDE4D-201ENST00000309641 FMR1Q06787 632 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDE4D-201ENST00000309641 SLFNL1Q499Z3 407 aa11.09□□□□□ -0.63
PDE4D-201ENST00000309641 MAP1SQ66K74 1059 aaPredicted RBP11.09□□□□□ -0.63
PDE4D-201ENST00000309641 USP50Q70EL3 339 aaPredicted RBP11.09□□□□□ -0.63
PDE4D-201ENST00000309641 ZBTB47Q9UFB7 747 aaPredicted RBP11.09□□□□□ -0.63
PDE4D-201ENST00000309641 CLEC11AQ9Y240 323 aa11.09□□□□□ -0.63
PDE4D-201ENST00000309641 PDE1AP54750 535 aa11.09□□□□□ -0.63
PDE4D-201ENST00000309641 PNMA8AQ86V59 439 aaPredicted RBP11.09□□□□□ -0.63
PDE4D-201ENST00000309641 PLEKHM2Q8IWE5 1019 aa11.09□□□□□ -0.63
PDE4D-201ENST00000309641 HAUS7Q99871 368 aa11.09□□□□□ -0.63
PDE4D-201ENST00000309641 LRP2BPQ9P2M1 347 aa11.09□□□□□ -0.63
PDE4D-201ENST00000309641 HDAC9Q9UKV0 1011 aa11.09□□□□□ -0.63
PDE4D-201ENST00000309641 POLR2AP24928 1970 aaKnown RBP11.08□□□□□ -0.64
PDE4D-201ENST00000309641 CLRN2A0PK11 232 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 SPDYE2BA6NHP3 402 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 IDH1O75874 414 aaKnown RBP11.08□□□□□ -0.64
PDE4D-201ENST00000309641 TOMM70O94826 608 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 SPDYE6P0CI01 402 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 DLGAP5Q15398 846 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 ERICH6Q7L0X2 663 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 ADGRA1Q86SQ6 560 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.08□□□□□ -0.64
PDE4D-201ENST00000309641 NSUN4Q96CB9 384 aaKnown RBP11.08□□□□□ -0.64
PDE4D-201ENST00000309641 GGA3Q9NZ52 723 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 RAI14Q9P0K7 980 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 SERPINA10Q9UK55 444 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 SUGT1Q9Y2Z0 365 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 DAGLAQ9Y4D2 1042 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 ANGEL2Q5VTE6 544 aaKnown RBP11.08□□□□□ -0.64
PDE4D-201ENST00000309641 APOBEC3HQ6NTF7 200 aaKnown RBP11.08□□□□□ -0.64
PDE4D-201ENST00000309641 LDHDQ86WU2 507 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 DZIP1Q86YF9 867 aaKnown RBP11.08□□□□□ -0.64
PDE4D-201ENST00000309641 ZGPATQ8N5A5 531 aaKnown RBP11.08□□□□□ -0.64
PDE4D-201ENST00000309641 TEKT1Q969V4 418 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 TDRD3Q9H7E2 651 aaKnown RBP11.08□□□□□ -0.64
PDE4D-201ENST00000309641 PAG1Q9NWQ8 432 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 STAP2Q9UGK3 403 aa11.08□□□□□ -0.64
PDE4D-201ENST00000309641 TTC41PQ6P2S7 1318 aa11.07□□□□□ -0.64
PDE4D-201ENST00000309641 CACNB3P54284 484 aa11.07□□□□□ -0.64
PDE4D-201ENST00000309641 CENPQQ7L2Z9 268 aaPredicted RBP11.07□□□□□ -0.64
PDE4D-201ENST00000309641 MTMR14Q8NCE2 650 aa11.07□□□□□ -0.64
PDE4D-201ENST00000309641 GLIS2Q9BZE0 524 aaPredicted RBP11.07□□□□□ -0.64
PDE4D-201ENST00000309641 PGAP2Q9UHJ9 254 aa11.07□□□□□ -0.64
PDE4D-201ENST00000309641 MYH2Q9UKX2 1941 aa11.07□□□□□ -0.64
PDE4D-201ENST00000309641 TRAF5O00463 557 aa11.06□□□□□ -0.64
PDE4D-201ENST00000309641 HDLBPQ00341 1268 aaKnown RBP11.06□□□□□ -0.64
PDE4D-201ENST00000309641 SPTY2D1Q68D10 685 aaPredicted RBP11.06□□□□□ -0.64
PDE4D-201ENST00000309641 HHIPL2Q6UWX4 724 aa11.06□□□□□ -0.64
PDE4D-201ENST00000309641 GPATCH3Q96I76 525 aa11.06□□□□□ -0.64
PDE4D-201ENST00000309641 ZDHHC15Q96MV8 337 aa11.06□□□□□ -0.64
PDE4D-201ENST00000309641 PPP4R2Q9NY27 417 aa11.06□□□□□ -0.64
PDE4D-201ENST00000309641 GAKO14976 1311 aa11.06□□□□□ -0.64
PDE4D-201ENST00000309641 ADM5C9JUS6 153 aa11.06□□□□□ -0.64
PDE4D-201ENST00000309641 GLRX3O76003 335 aaKnown RBP11.06□□□□□ -0.64
PDE4D-201ENST00000309641 ITGBL1O95965 494 aaPredicted RBP11.06□□□□□ -0.64
PDE4D-201ENST00000309641 PRAMEF18Q5VWM3 479 aa11.06□□□□□ -0.64
PDE4D-201ENST00000309641 CHADLQ6NUI6 762 aa11.06□□□□□ -0.64
PDE4D-201ENST00000309641 CNTROBQ8N137 903 aa11.06□□□□□ -0.64
PDE4D-201ENST00000309641 MAGEB6Q8N7X4 407 aa11.06□□□□□ -0.64
PDE4D-201ENST00000309641 MRIQ9BWK5 157 aa11.06□□□□□ -0.64
PDE4D-201ENST00000309641 PCNTO95613 3336 aa11.06□□□□□ -0.64
PDE4D-201ENST00000309641 DOCK2Q92608 1830 aa11.05□□□□□ -0.64
PDE4D-201ENST00000309641 MAST3O60307 1309 aa11.05□□□□□ -0.64
PDE4D-201ENST00000309641 NAA16Q6N069 864 aaPredicted RBP11.05□□□□□ -0.64
PDE4D-201ENST00000309641 RBM46Q8TBY0 533 aaKnown RBP11.05□□□□□ -0.64
PDE4D-201ENST00000309641 ZC3H15Q8WU90 426 aaKnown RBP11.05□□□□□ -0.64
PDE4D-201ENST00000309641 ZNF70Q9UC06 446 aaPredicted RBP11.05□□□□□ -0.64
PDE4D-201ENST00000309641 MROH7-TTC4A0A0A0MT08 1334 aa11.05□□□□□ -0.64
PDE4D-201ENST00000309641 ERC2O15083 957 aa11.04□□□□□ -0.64
PDE4D-201ENST00000309641 CYP7A1P22680 504 aa11.04□□□□□ -0.64
PDE4D-201ENST00000309641 SLC9C2Q5TAH2 1124 aa11.04□□□□□ -0.64
PDE4D-201ENST00000309641 ERICH6BQ5W0A0 696 aa11.04□□□□□ -0.64
PDE4D-201ENST00000309641 CDC42EP5Q6NZY7 148 aa11.04□□□□□ -0.64
PDE4D-201ENST00000309641 KRT26Q7Z3Y9 468 aa11.04□□□□□ -0.64
PDE4D-201ENST00000309641 USP48Q86UV5 1035 aa11.04□□□□□ -0.64
PDE4D-201ENST00000309641 FAM163AQ96GL9 167 aaPredicted RBP11.04□□□□□ -0.64
PDE4D-201ENST00000309641 VEZTQ9HBM0 779 aa11.04□□□□□ -0.64
PDE4D-201ENST00000309641 TCRBV5S4A2TA0A5A2 114 aa11.04□□□□□ -0.64
PDE4D-201ENST00000309641 PDE6AP16499 860 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms