RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 AK7Q96M32 723 aa12.83□□□□□ -0.35
PTPN7-201ENST00000309017 CCDC85AQ96PX6 553 aaPredicted RBP12.83□□□□□ -0.35
PTPN7-201ENST00000309017 BAG1Q99933 345 aaPredicted RBP12.83□□□□□ -0.35
PTPN7-201ENST00000309017 BPIFA3Q9BQP9 254 aa12.83□□□□□ -0.35
PTPN7-201ENST00000309017 ALG1Q9BT22 464 aa12.83□□□□□ -0.35
PTPN7-201ENST00000309017 TRIM34Q9BYJ4 488 aa12.83□□□□□ -0.35
PTPN7-201ENST00000309017 CMA1P23946 247 aa12.83□□□□□ -0.36
PTPN7-201ENST00000309017 SMC1AQ14683 1233 aaKnown RBP12.83□□□□□ -0.36
PTPN7-201ENST00000309017 TAF7LQ5H9L4 462 aa12.83□□□□□ -0.36
PTPN7-201ENST00000309017 TTC39AQ5SRH9 613 aa12.83□□□□□ -0.36
PTPN7-201ENST00000309017 ZNF496Q96IT1 587 aaPredicted RBP12.83□□□□□ -0.36
PTPN7-201ENST00000309017 PPP2R2CQ9Y2T4 447 aa12.83□□□□□ -0.36
PTPN7-201ENST00000309017 FAM193AP78312 1265 aa12.83□□□□□ -0.36
PTPN7-201ENST00000309017 PDIA6Q15084 440 aa12.83□□□□□ -0.36
PTPN7-201ENST00000309017 CCDC93Q567U6 631 aa12.83□□□□□ -0.36
PTPN7-201ENST00000309017 ZMYM1Q5SVZ6 1142 aa12.83□□□□□ -0.36
PTPN7-201ENST00000309017 ARHGAP6O43182 974 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 TADA3O75528 432 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 CCDC102BQ68D86 513 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 THEMISQ8N1K5 641 aaPredicted RBP12.82□□□□□ -0.36
PTPN7-201ENST00000309017 ZNF594Q96JF6 807 aaPredicted RBP12.82□□□□□ -0.36
PTPN7-201ENST00000309017 KCND1Q9NSA2 647 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 ZNF213O14771 459 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 IKBKBO14920 756 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 GCP02774 474 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 ADKP55263 362 aaKnown RBP12.82□□□□□ -0.36
PTPN7-201ENST00000309017 ZC3H6P61129 1189 aaKnown RBP12.82□□□□□ -0.36
PTPN7-201ENST00000309017 NCAPHQ15003 741 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 CCDC158Q5M9N0 1113 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 AIFM3Q96NN9 605 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 DESI2Q9BSY9 194 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.82□□□□□ -0.36
PTPN7-201ENST00000309017 HOOK1Q9UJC3 728 aaKnown RBP12.82□□□□□ -0.36
PTPN7-201ENST00000309017 JCADQ9P266 1359 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 SPECC1Q5M775 1068 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 MICU3Q86XE3 530 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 NCOA7Q8NI08 942 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 CLIC6Q96NY7 704 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 CHD2O14647 1828 aaKnown RBP12.82□□□□□ -0.36
PTPN7-201ENST00000309017 NWD1Q149M9 1564 aa12.82□□□□□ -0.36
PTPN7-201ENST00000309017 KIF28PB7ZC32 967 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 M0R2C6 588 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 GYS2P54840 703 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 ST5P78524 1137 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 MCM6Q14566 821 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 CPLX3Q8WVH0 158 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 MPHOSPH8Q99549 860 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 CEP126Q9P2H0 1117 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 PIK3C2AO00443 1686 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 DIP2AQ14689 1571 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 KCNJ6P48051 423 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 RFX5P48382 616 aaPredicted RBP12.81□□□□□ -0.36
PTPN7-201ENST00000309017 CCDC191Q8NCU4 936 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 CWC15Q9P013 229 aaKnown RBP12.81□□□□□ -0.36
PTPN7-201ENST00000309017 CRYBG1Q9Y4K1 1723 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 GOLGA6L9A6NEM1 432 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 WDHD1O75717 1129 aaPredicted RBP12.81□□□□□ -0.36
PTPN7-201ENST00000309017 KIF23Q02241 960 aaPredicted RBP12.81□□□□□ -0.36
PTPN7-201ENST00000309017 SMARCE1Q969G3 411 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 LZTFL1Q9NQ48 299 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 FAM53CQ9NYF3 392 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 TOPAZ1Q8N9V7 1692 aa12.81□□□□□ -0.36
PTPN7-201ENST00000309017 SNRPA1P09661 255 aaKnown RBP12.8□□□□□ -0.36
PTPN7-201ENST00000309017 METAP2P50579 478 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTPN7-201ENST00000309017 VPS37DQ86XT2 251 aa12.8□□□□□ -0.36
PTPN7-201ENST00000309017 VSTM4Q8IW00 320 aa12.8□□□□□ -0.36
PTPN7-201ENST00000309017 GOLGA1Q92805 767 aa12.8□□□□□ -0.36
PTPN7-201ENST00000309017 PUF60Q9UHX1 559 aaKnown RBP12.8□□□□□ -0.36
PTPN7-201ENST00000309017 SALL1Q9NSC2 1324 aa12.8□□□□□ -0.36
PTPN7-201ENST00000309017 GPR161Q8N6U8 529 aaKnown RBP12.8□□□□□ -0.36
PTPN7-201ENST00000309017 PHKBQ93100 1093 aa12.8□□□□□ -0.36
PTPN7-201ENST00000309017 OSBP2Q969R2 916 aa12.8□□□□□ -0.36
PTPN7-201ENST00000309017 WDR24Q96S15 920 aa12.8□□□□□ -0.36
PTPN7-201ENST00000309017 TOMM22Q9NS69 142 aa12.8□□□□□ -0.36
PTPN7-201ENST00000309017 PARP3Q9Y6F1 533 aa12.8□□□□□ -0.36
PTPN7-201ENST00000309017 MROH7-TTC4A0A0A0MT08 1334 aa12.8□□□□□ -0.36
PTPN7-201ENST00000309017 ANKARQ7Z5J8 1434 aa12.8□□□□□ -0.36
PTPN7-201ENST00000309017 IL15P40933 162 aaPredicted RBP12.8□□□□□ -0.36
PTPN7-201ENST00000309017 SLC39A14Q15043 492 aa12.8□□□□□ -0.36
PTPN7-201ENST00000309017 CC2D1AQ6P1N0 951 aaPredicted RBP12.8□□□□□ -0.36
PTPN7-201ENST00000309017 TRIM65Q6PJ69 517 aa12.8□□□□□ -0.36
PTPN7-201ENST00000309017 TRMT44Q8IYL2 757 aaKnown RBP12.8□□□□□ -0.36
PTPN7-201ENST00000309017 RAD51AP2Q09MP3 1159 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 LRRC24Q50LG9 513 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 TSPYL1Q9H0U9 437 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 PCDHA5Q9Y5H7 936 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 RFX7Q2KHR2 1363 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 PXDNQ92626 1479 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 NCAPD2Q15021 1401 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 CDKL5O76039 1030 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 FGAP02671 866 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 TATP17735 454 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-201ENST00000309017 ZSCAN26Q16670 478 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 AXDND1Q5T1B0 1012 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-201ENST00000309017 KLHL10Q6JEL2 608 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 LEKR1Q6ZMV7 388 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 REXO1L1PQ8IX06 675 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 C10orf67Q8IYJ2 551 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms