RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 ZNF446Q9NWS9 450 aa19.24■□□□□ 0.67
SSH3-201ENST00000308127 NEMFO60524 1076 aa19.23■□□□□ 0.67
SSH3-201ENST00000308127 GNL2Q13823 731 aaKnown RBP19.23■□□□□ 0.67
SSH3-201ENST00000308127 ZNF397Q8NF99 534 aaPredicted RBP19.23■□□□□ 0.67
SSH3-201ENST00000308127 DNAI1Q9UI46 699 aa19.23■□□□□ 0.67
SSH3-201ENST00000308127 GPAA1O43292 621 aa19.23■□□□□ 0.67
SSH3-201ENST00000308127 FANCCQ00597 558 aa19.23■□□□□ 0.67
SSH3-201ENST00000308127 KIF23Q02241 960 aaPredicted RBP19.23■□□□□ 0.67
SSH3-201ENST00000308127 AXDND1Q5T1B0 1012 aaPredicted RBP19.23■□□□□ 0.67
SSH3-201ENST00000308127 GPTP24298 496 aa19.22■□□□□ 0.67
SSH3-201ENST00000308127 CCDC57Q2TAC2 916 aa19.22■□□□□ 0.67
SSH3-201ENST00000308127 TRHP20396 242 aaPredicted RBP19.22■□□□□ 0.67
SSH3-201ENST00000308127 CCDC158Q5M9N0 1113 aa19.22■□□□□ 0.67
SSH3-201ENST00000308127 MB21D2Q8IYB1 491 aaPredicted RBP19.22■□□□□ 0.67
SSH3-201ENST00000308127 ZNF213O14771 459 aa19.22■□□□□ 0.67
SSH3-201ENST00000308127 SERPINC1P01008 464 aa19.22■□□□□ 0.67
SSH3-201ENST00000308127 ATP2B1P20020 1258 aa19.22■□□□□ 0.67
SSH3-201ENST00000308127 CFAP100Q494V2 611 aa19.22■□□□□ 0.67
SSH3-201ENST00000308127 KCNG4Q8TDN1 519 aa19.22■□□□□ 0.67
SSH3-201ENST00000308127 CYB5R4Q7L1T6 521 aa19.21■□□□□ 0.67
SSH3-201ENST00000308127 ERO1AQ96HE7 468 aa19.21■□□□□ 0.67
SSH3-201ENST00000308127 ALG1Q9BT22 464 aa19.21■□□□□ 0.67
SSH3-201ENST00000308127 B4E1Z4 1266 aa19.21■□□□□ 0.67
SSH3-201ENST00000308127 FANCGO15287 622 aa19.21■□□□□ 0.67
SSH3-201ENST00000308127 IDH1O75874 414 aaKnown RBP19.21■□□□□ 0.67
SSH3-201ENST00000308127 CDC27P30260 824 aa19.21■□□□□ 0.67
SSH3-201ENST00000308127 NLRP12P59046 1061 aa19.21■□□□□ 0.67
SSH3-201ENST00000308127 TBC1D10CQ8IV04 446 aa19.21■□□□□ 0.67
SSH3-201ENST00000308127 CMTR1Q8N1G2 835 aaKnown RBP19.21■□□□□ 0.67
SSH3-201ENST00000308127 UTP14AQ9BVJ6 771 aaKnown RBP19.21■□□□□ 0.67
SSH3-201ENST00000308127 RFX7Q2KHR2 1363 aa19.2■□□□□ 0.66
SSH3-201ENST00000308127 A0A0U1RQG5 324 aaPredicted RBP19.2■□□□□ 0.66
SSH3-201ENST00000308127 SNAP23O00161 211 aa19.2■□□□□ 0.66
SSH3-201ENST00000308127 SYKP43405 635 aa19.2■□□□□ 0.66
SSH3-201ENST00000308127 GSDMDP57764 484 aa19.2■□□□□ 0.66
SSH3-201ENST00000308127 ZNF827Q17R98 1081 aa19.2■□□□□ 0.66
SSH3-201ENST00000308127 VPS37DQ86XT2 251 aa19.2■□□□□ 0.66
SSH3-201ENST00000308127 OSBPL5Q9H0X9 879 aaPredicted RBP19.2■□□□□ 0.66
SSH3-201ENST00000308127 HSD3B7Q9H2F3 369 aa19.2■□□□□ 0.66
SSH3-201ENST00000308127 SLFN14P0C7P3 912 aa19.2■□□□□ 0.66
SSH3-201ENST00000308127 SYCP1Q15431 976 aa19.2■□□□□ 0.66
SSH3-201ENST00000308127 NCOA7Q8NI08 942 aa19.2■□□□□ 0.66
SSH3-201ENST00000308127 NBPF3Q9H094 633 aa19.2■□□□□ 0.66
SSH3-201ENST00000308127 A0A1W2PQ27 194 aa19.19■□□□□ 0.66
SSH3-201ENST00000308127 A0A1W2PQ64 194 aa19.19■□□□□ 0.66
SSH3-201ENST00000308127 A0A1W2PQD8 194 aa19.19■□□□□ 0.66
SSH3-201ENST00000308127 SHC4Q6S5L8 630 aa19.19■□□□□ 0.66
SSH3-201ENST00000308127 POLR3EQ9NVU0 708 aa19.19■□□□□ 0.66
SSH3-201ENST00000308127 MORC2Q9Y6X9 1032 aaPredicted RBP19.19■□□□□ 0.66
SSH3-201ENST00000308127 ZBTB22O15209 634 aa19.19■□□□□ 0.66
SSH3-201ENST00000308127 UBASH3AP57075 661 aa19.19■□□□□ 0.66
SSH3-201ENST00000308127 ARHGAP29Q52LW3 1261 aa19.19■□□□□ 0.66
SSH3-201ENST00000308127 KRT222Q8N1A0 295 aa19.19■□□□□ 0.66
SSH3-201ENST00000308127 SLIT3O75094 1523 aa19.19■□□□□ 0.66
SSH3-201ENST00000308127 PDILTQ8N807 584 aa19.18■□□□□ 0.66
SSH3-201ENST00000308127 HELBQ8NG08 1087 aaPredicted RBP19.18■□□□□ 0.66
SSH3-201ENST00000308127 FANCLQ9NW38 375 aa19.18■□□□□ 0.66
SSH3-201ENST00000308127 MYH15Q9Y2K3 1946 aa19.18■□□□□ 0.66
SSH3-201ENST00000308127 GRIN1Q05586 938 aa19.18■□□□□ 0.66
SSH3-201ENST00000308127 KRT40Q6A162 431 aa19.18■□□□□ 0.66
SSH3-201ENST00000308127 GRAMD1CQ8IYS0 662 aa19.18■□□□□ 0.66
SSH3-201ENST00000308127 ARFGEF2Q9Y6D5 1785 aa19.18■□□□□ 0.66
SSH3-201ENST00000308127 URI1O94763 535 aaPredicted RBP19.18■□□□□ 0.66
SSH3-201ENST00000308127 YEATS4O95619 227 aa19.18■□□□□ 0.66
SSH3-201ENST00000308127 METAP2P50579 478 aaKnown RBP eCLIP19.18■□□□□ 0.66
SSH3-201ENST00000308127 PDE4BQ07343 736 aa19.18■□□□□ 0.66
SSH3-201ENST00000308127 SLC9C2Q5TAH2 1124 aa19.18■□□□□ 0.66
SSH3-201ENST00000308127 NFXL1Q6ZNB6 911 aa19.18■□□□□ 0.66
SSH3-201ENST00000308127 TRMT44Q8IYL2 757 aaKnown RBP19.18■□□□□ 0.66
SSH3-201ENST00000308127 ZKSCAN3Q9BRR0 538 aa19.18■□□□□ 0.66
SSH3-201ENST00000308127 SEC31AO94979 1220 aaKnown RBP19.17■□□□□ 0.66
SSH3-201ENST00000308127 MCAMP43121 646 aa19.17■□□□□ 0.66
SSH3-201ENST00000308127 LONRF3Q496Y0 759 aa19.17■□□□□ 0.66
SSH3-201ENST00000308127 ATL3Q6DD88 541 aa19.17■□□□□ 0.66
SSH3-201ENST00000308127 FOXP4Q8IVH2 680 aaPredicted RBP19.17■□□□□ 0.66
SSH3-201ENST00000308127 KIF20AO95235 890 aa19.17■□□□□ 0.66
SSH3-201ENST00000308127 CLCN6P51797 869 aa19.16■□□□□ 0.66
SSH3-201ENST00000308127 SCN11AQ9UI33 1791 aa19.16■□□□□ 0.66
SSH3-201ENST00000308127 DHX16O60231 1041 aaKnown RBP19.16■□□□□ 0.66
SSH3-201ENST00000308127 METTL24Q5JXM2 366 aa19.16■□□□□ 0.66
SSH3-201ENST00000308127 CCDC150Q8NCX0 1101 aa19.16■□□□□ 0.66
SSH3-201ENST00000308127 TOMM22Q9NS69 142 aa19.16■□□□□ 0.66
SSH3-201ENST00000308127 KAT6BQ8WYB5 2073 aa19.16■□□□□ 0.66
SSH3-201ENST00000308127 CMA1P23946 247 aa19.15■□□□□ 0.66
SSH3-201ENST00000308127 TPM4P67936 248 aa19.15■□□□□ 0.66
SSH3-201ENST00000308127 RRP12Q5JTH9 1297 aaKnown RBP19.15■□□□□ 0.66
SSH3-201ENST00000308127 APPBP2Q92624 585 aa19.15■□□□□ 0.66
SSH3-201ENST00000308127 KCNJ14Q9UNX9 436 aa19.15■□□□□ 0.66
SSH3-201ENST00000308127 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.15■□□□□ 0.66
SSH3-201ENST00000308127 TRDNQ13061 729 aa19.15■□□□□ 0.66
SSH3-201ENST00000308127 TERF2Q15554 542 aa19.15■□□□□ 0.66
SSH3-201ENST00000308127 TOM1L2Q6ZVM7 507 aa19.15■□□□□ 0.66
SSH3-201ENST00000308127 CARD6Q9BX69 1037 aa19.15■□□□□ 0.66
SSH3-201ENST00000308127 ABCC6O95255 1503 aa19.15■□□□□ 0.66
SSH3-201ENST00000308127 GUCY1A2P33402 732 aa19.15■□□□□ 0.66
SSH3-201ENST00000308127 CTDSPL2Q05D32 466 aa19.15■□□□□ 0.66
SSH3-201ENST00000308127 SLC39A14Q15043 492 aa19.15■□□□□ 0.66
SSH3-201ENST00000308127 METTL16Q86W50 562 aaKnown RBP19.15■□□□□ 0.66
SSH3-201ENST00000308127 CCDC191Q8NCU4 936 aa19.15■□□□□ 0.66
SSH3-201ENST00000308127 TRERF1Q96PN7 1200 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms