RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 MYL5Q02045 173 aa15.24■□□□□ 0.03
CASC4-201ENST00000299957 CLEC17AQ6ZS10 378 aa15.24■□□□□ 0.03
CASC4-201ENST00000299957 IQCA1Q86XH1 822 aa15.24■□□□□ 0.03
CASC4-201ENST00000299957 SMAP1Q8IYB5 467 aaPredicted RBP15.24■□□□□ 0.03
CASC4-201ENST00000299957 DIS3L2Q8IYB7 885 aaKnown RBP15.24■□□□□ 0.03
CASC4-201ENST00000299957 NSUN7Q8NE18 718 aaKnown RBP15.24■□□□□ 0.03
CASC4-201ENST00000299957 VPS16Q9H269 839 aa15.24■□□□□ 0.03
CASC4-201ENST00000299957 MKNK2Q9HBH9 465 aa15.24■□□□□ 0.03
CASC4-201ENST00000299957 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.24■□□□□ 0.03
CASC4-201ENST00000299957 KIAA1468Q9P260 1216 aa15.24■□□□□ 0.03
CASC4-201ENST00000299957 KCNH3Q9ULD8 1083 aa15.24■□□□□ 0.03
CASC4-201ENST00000299957 CHD1O14646 1710 aa15.24■□□□□ 0.03
CASC4-201ENST00000299957 VWA3AA6NCI4 1184 aa15.24■□□□□ 0.03
CASC4-201ENST00000299957 VGLL3A8MV65 326 aa15.24■□□□□ 0.03
CASC4-201ENST00000299957 PTPN12Q05209 780 aaKnown RBP15.24■□□□□ 0.03
CASC4-201ENST00000299957 TERF1P54274 439 aa15.24■□□□□ 0.03
CASC4-201ENST00000299957 ZNF569Q5MCW4 686 aa15.24■□□□□ 0.03
CASC4-201ENST00000299957 PLBD2Q8NHP8 589 aa15.24■□□□□ 0.03
CASC4-201ENST00000299957 FANCLQ9NW38 375 aa15.24■□□□□ 0.03
CASC4-201ENST00000299957 TSPY2A6NKD2 308 aa15.23■□□□□ 0.03
CASC4-201ENST00000299957 GUCA1BQ9UMX6 200 aa15.23■□□□□ 0.03
CASC4-201ENST00000299957 H0YHG0 523 aa15.23■□□□□ 0.03
CASC4-201ENST00000299957 HOXB7P09629 217 aa15.23■□□□□ 0.03
CASC4-201ENST00000299957 CCDC181Q5TID7 509 aa15.23■□□□□ 0.03
CASC4-201ENST00000299957 OSBP2Q969R2 916 aa15.23■□□□□ 0.03
CASC4-201ENST00000299957 KCNF1Q9H3M0 494 aa15.23■□□□□ 0.03
CASC4-201ENST00000299957 OGFRQ9NZT2 677 aa15.23■□□□□ 0.03
CASC4-201ENST00000299957 BTBD18B2RXH4 712 aa15.23■□□□□ 0.03
CASC4-201ENST00000299957 KRT18P05783 430 aaKnown RBP15.23■□□□□ 0.03
CASC4-201ENST00000299957 MCM7P33993 719 aa15.23■□□□□ 0.03
CASC4-201ENST00000299957 DNAJC21Q5F1R6 531 aaKnown RBP15.23■□□□□ 0.03
CASC4-201ENST00000299957 EPC1Q9H2F5 836 aa15.23■□□□□ 0.03
CASC4-201ENST00000299957 ARFGAP3Q9NP61 516 aa15.23■□□□□ 0.03
CASC4-201ENST00000299957 CCDC196A0A1B0GTZ2 297 aa15.22■□□□□ 0.03
CASC4-201ENST00000299957 SIRT1Q96EB6 747 aa15.22■□□□□ 0.03
CASC4-201ENST00000299957 PLEKHA4Q9H4M7 779 aa15.22■□□□□ 0.03
CASC4-201ENST00000299957 ANGEL1Q9UNK9 670 aaKnown RBP15.22■□□□□ 0.03
CASC4-201ENST00000299957 SSH2Q76I76 1423 aa15.22■□□□□ 0.03
CASC4-201ENST00000299957 ERLIN1O75477 346 aa15.22■□□□□ 0.03
CASC4-201ENST00000299957 CATIPQ7Z7H3 387 aa15.22■□□□□ 0.03
CASC4-201ENST00000299957 BAG1Q99933 345 aaPredicted RBP15.22■□□□□ 0.03
CASC4-201ENST00000299957 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.22■□□□□ 0.03
CASC4-201ENST00000299957 AP5Z1O43299 807 aa15.21■□□□□ 0.03
CASC4-201ENST00000299957 ZNF532Q9HCE3 1301 aa15.21■□□□□ 0.03
CASC4-201ENST00000299957 CDK12Q9NYV4 1490 aaPredicted RBP15.21■□□□□ 0.03
CASC4-201ENST00000299957 RPAP1Q9BWH6 1393 aaPredicted RBP15.21■□□□□ 0.03
CASC4-201ENST00000299957 ZFYP08048 801 aaPredicted RBP15.21■□□□□ 0.03
CASC4-201ENST00000299957 PSMB7Q99436 277 aa15.21■□□□□ 0.03
CASC4-201ENST00000299957 TSPYL1Q9H0U9 437 aa15.21■□□□□ 0.03
CASC4-201ENST00000299957 ACBD3Q9H3P7 528 aa15.21■□□□□ 0.03
CASC4-201ENST00000299957 JADE2Q9NQC1 790 aa15.21■□□□□ 0.03
CASC4-201ENST00000299957 HELLSQ9NRZ9 838 aa15.21■□□□□ 0.03
CASC4-201ENST00000299957 CEP131Q9UPN4 1083 aa15.21■□□□□ 0.03
CASC4-201ENST00000299957 V9GY48 417 aaPredicted RBP15.21■□□□□ 0.03
CASC4-201ENST00000299957 QRICH2Q9H0J4 1663 aa15.21■□□□□ 0.03
CASC4-201ENST00000299957 MED14O60244 1454 aa15.21■□□□□ 0.03
CASC4-201ENST00000299957 STIM1Q13586 685 aa15.21■□□□□ 0.02
CASC4-201ENST00000299957 BLZF1Q9H2G9 400 aa15.21■□□□□ 0.02
CASC4-201ENST00000299957 KDRP35968 1356 aa15.2■□□□□ 0.02
CASC4-201ENST00000299957 M0R2C6 588 aa15.2■□□□□ 0.02
CASC4-201ENST00000299957 SMYD4Q8IYR2 804 aaPredicted RBP15.2■□□□□ 0.02
CASC4-201ENST00000299957 HAUS7Q99871 368 aa15.2■□□□□ 0.02
CASC4-201ENST00000299957 GOLPH3LQ9H4A5 285 aa15.2■□□□□ 0.02
CASC4-201ENST00000299957 VPS54Q9P1Q0 977 aa15.2■□□□□ 0.02
CASC4-201ENST00000299957 CCDC194A0A1B0GVG4 234 aa15.2■□□□□ 0.02
CASC4-201ENST00000299957 PFKFB2O60825 505 aa15.2■□□□□ 0.02
CASC4-201ENST00000299957 SEC31AO94979 1220 aaKnown RBP15.2■□□□□ 0.02
CASC4-201ENST00000299957 UBA7P41226 1012 aa15.2■□□□□ 0.02
CASC4-201ENST00000299957 KRI1Q8N9T8 703 aaKnown RBP15.2■□□□□ 0.02
CASC4-201ENST00000299957 APPBP2Q92624 585 aa15.2■□□□□ 0.02
CASC4-201ENST00000299957 FAM107BQ9H098 131 aa15.2■□□□□ 0.02
CASC4-201ENST00000299957 PUS7LQ9H0K6 701 aaKnown RBP15.2■□□□□ 0.02
CASC4-201ENST00000299957 MAST3O60307 1309 aa15.2■□□□□ 0.02
CASC4-201ENST00000299957 TRIM75PA6NK02 468 aa15.2■□□□□ 0.02
CASC4-201ENST00000299957 PHKG2P15735 406 aa15.2■□□□□ 0.02
CASC4-201ENST00000299957 IFIT1BQ5T764 474 aaKnown RBP15.2■□□□□ 0.02
CASC4-201ENST00000299957 ERO1AQ96HE7 468 aa15.2■□□□□ 0.02
CASC4-201ENST00000299957 ATP7BP35670 1465 aa15.2■□□□□ 0.02
CASC4-201ENST00000299957 MTIF2P46199 727 aaKnown RBP15.19■□□□□ 0.02
CASC4-201ENST00000299957 RESTQ13127 1097 aa15.19■□□□□ 0.02
CASC4-201ENST00000299957 CRACR2AQ9BSW2 395 aa15.19■□□□□ 0.02
CASC4-201ENST00000299957 ADCY9O60503 1353 aa15.19■□□□□ 0.02
CASC4-201ENST00000299957 TDRD12Q587J7 1177 aaKnown RBP15.19■□□□□ 0.02
CASC4-201ENST00000299957 CAVIN4Q5BKX8 364 aa15.19■□□□□ 0.02
CASC4-201ENST00000299957 NAA16Q6N069 864 aaPredicted RBP15.19■□□□□ 0.02
CASC4-201ENST00000299957 TRIM47Q96LD4 638 aa15.19■□□□□ 0.02
CASC4-201ENST00000299957 CWC15Q9P013 229 aaKnown RBP15.19■□□□□ 0.02
CASC4-201ENST00000299957 SERTAD1Q9UHV2 236 aa15.19■□□□□ 0.02
CASC4-201ENST00000299957 MLH3Q9UHC1 1453 aa15.19■□□□□ 0.02
CASC4-201ENST00000299957 MYO1BO43795 1136 aa15.19■□□□□ 0.02
CASC4-201ENST00000299957 ARID5AQ03989 594 aa15.19■□□□□ 0.02
CASC4-201ENST00000299957 CCDC178Q5BJE1 867 aa15.19■□□□□ 0.02
CASC4-201ENST00000299957 SOGA3Q5TF21 947 aa15.19■□□□□ 0.02
CASC4-201ENST00000299957 SDR42E1Q8WUS8 393 aa15.19■□□□□ 0.02
CASC4-201ENST00000299957 VPS18Q9P253 973 aa15.19■□□□□ 0.02
CASC4-201ENST00000299957 PCDHA5Q9Y5H7 936 aa15.19■□□□□ 0.02
CASC4-201ENST00000299957 ADALQ6DHV7 355 aa15.18■□□□□ 0.02
CASC4-201ENST00000299957 DZIP3Q86Y13 1208 aaKnown RBP15.18■□□□□ 0.02
CASC4-201ENST00000299957 DZIP1Q86YF9 867 aaKnown RBP15.18■□□□□ 0.02
CASC4-201ENST00000299957 ANKIB1Q9P2G1 1089 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms