RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 PI16Q6UXB8 463 aa8□□□□□ -1.13
CD44-204ENST00000279452 CDC37L1Q7L3B6 337 aa8□□□□□ -1.13
CD44-204ENST00000279452 SPATA5Q8NB90 893 aa8□□□□□ -1.13
CD44-204ENST00000279452 ZC3H15Q8WU90 426 aaKnown RBP8□□□□□ -1.13
CD44-204ENST00000279452 TEKT1Q969V4 418 aa8□□□□□ -1.13
CD44-204ENST00000279452 EAF2Q96CJ1 260 aaPredicted RBP8□□□□□ -1.13
CD44-204ENST00000279452 RAI14Q9P0K7 980 aa8□□□□□ -1.13
CD44-204ENST00000279452 DBNLQ9UJU6 430 aaKnown RBP8□□□□□ -1.13
CD44-204ENST00000279452 ABT1Q9ULW3 272 aaKnown RBP8□□□□□ -1.13
CD44-204ENST00000279452 PCDHB15Q9Y5E8 787 aa8□□□□□ -1.13
CD44-204ENST00000279452 ADAMTSL1Q8N6G6 1762 aa7.99□□□□□ -1.13
CD44-204ENST00000279452 PSME4Q14997 1843 aa7.99□□□□□ -1.13
CD44-204ENST00000279452 WNT10BO00744 389 aa7.99□□□□□ -1.13
CD44-204ENST00000279452 CELF2O95319 508 aaKnown RBP7.99□□□□□ -1.13
CD44-204ENST00000279452 ARID4AP29374 1257 aaPredicted RBP7.99□□□□□ -1.13
CD44-204ENST00000279452 PRDX5P30044 214 aa7.99□□□□□ -1.13
CD44-204ENST00000279452 MCAMP43121 646 aa7.99□□□□□ -1.13
CD44-204ENST00000279452 APLP1P51693 650 aa7.99□□□□□ -1.13
CD44-204ENST00000279452 FMR1Q06787 632 aaKnown RBP eCLIP7.99□□□□□ -1.13
CD44-204ENST00000279452 GRM1Q13255 1194 aa7.99□□□□□ -1.13
CD44-204ENST00000279452 DIXDC1Q155Q3 683 aa7.99□□□□□ -1.13
CD44-204ENST00000279452 SPTY2D1Q68D10 685 aaPredicted RBP7.99□□□□□ -1.13
CD44-204ENST00000279452 ERICH6Q7L0X2 663 aa7.99□□□□□ -1.13
CD44-204ENST00000279452 APOBEC3FQ8IUX4 373 aaKnown RBP7.99□□□□□ -1.13
CD44-204ENST00000279452 DNAJC2Q99543 621 aaKnown RBP7.99□□□□□ -1.13
CD44-204ENST00000279452 TMOD2Q9NZR1 351 aa7.99□□□□□ -1.13
CD44-204ENST00000279452 HMG20BQ9P0W2 317 aa7.99□□□□□ -1.13
CD44-204ENST00000279452 LRP2BPQ9P2M1 347 aa7.99□□□□□ -1.13
CD44-204ENST00000279452 SERPINA10Q9UK55 444 aa7.99□□□□□ -1.13
CD44-204ENST00000279452 PCDHAC2Q9Y5I4 1007 aa7.99□□□□□ -1.13
CD44-204ENST00000279452 SPDYE2BA6NHP3 402 aa7.98□□□□□ -1.13
CD44-204ENST00000279452 CENPBP07199 599 aaPredicted RBP7.98□□□□□ -1.13
CD44-204ENST00000279452 SPDYE6P0CI01 402 aa7.98□□□□□ -1.13
CD44-204ENST00000279452 KCNA4P22459 653 aa7.98□□□□□ -1.13
CD44-204ENST00000279452 MMP14P50281 582 aa7.98□□□□□ -1.13
CD44-204ENST00000279452 AAMPQ13685 434 aa7.98□□□□□ -1.13
CD44-204ENST00000279452 TTLL12Q14166 644 aaPredicted RBP7.98□□□□□ -1.13
CD44-204ENST00000279452 DLK2Q6UY11 383 aa7.98□□□□□ -1.13
CD44-204ENST00000279452 TBC1D9Q6ZT07 1266 aa7.98□□□□□ -1.13
CD44-204ENST00000279452 GPATCH3Q96I76 525 aa7.98□□□□□ -1.13
CD44-204ENST00000279452 PRMT6Q96LA8 375 aaPredicted RBP7.98□□□□□ -1.13
CD44-204ENST00000279452 RWDD1Q9H446 243 aaPredicted RBP7.98□□□□□ -1.13
CD44-204ENST00000279452 TDRD3Q9H7E2 651 aaKnown RBP7.98□□□□□ -1.13
CD44-204ENST00000279452 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.98□□□□□ -1.13
CD44-204ENST00000279452 SUGT1Q9Y2Z0 365 aa7.98□□□□□ -1.13
CD44-204ENST00000279452 ZNF646O15015 1829 aaPredicted RBP7.97□□□□□ -1.13
CD44-204ENST00000279452 TMEM88BA6NKF7 163 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 TCP10L2B9ZVM9 353 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 IDH1O75874 414 aaKnown RBP7.97□□□□□ -1.13
CD44-204ENST00000279452 ITGBL1O95965 494 aaPredicted RBP7.97□□□□□ -1.13
CD44-204ENST00000279452 NEFLP07196 543 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 NF2P35240 595 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 ZAP70P43403 619 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 TNNI2P48788 182 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 CACNB3P54284 484 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 GSTO1P78417 241 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 PRKG1Q13976 671 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 ANKRD45Q5TZF3 282 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 PRAMEF18Q5VWM3 479 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 B4GALNT3Q6L9W6 998 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 SLF2Q8IX21 1173 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 CDCA5Q96FF9 252 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 NOL10Q9BSC4 688 aaKnown RBP7.97□□□□□ -1.13
CD44-204ENST00000279452 DCTPP1Q9H773 170 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 NDUFB9Q9Y6M9 179 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 MYH13Q9UKX3 1938 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 PDS5AQ29RF7 1337 aaKnown RBP7.97□□□□□ -1.13
CD44-204ENST00000279452 PASKQ96RG2 1323 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 PITPNM2Q9BZ72 1349 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 SALL1Q9NSC2 1324 aa7.97□□□□□ -1.13
CD44-204ENST00000279452 GOLIM4O00461 696 aa7.96□□□□□ -1.14
CD44-204ENST00000279452 HDLBPQ00341 1268 aaKnown RBP7.96□□□□□ -1.14
CD44-204ENST00000279452 MECOMQ03112 1051 aa7.96□□□□□ -1.14
CD44-204ENST00000279452 TNFAIP1Q13829 316 aa7.96□□□□□ -1.14
CD44-204ENST00000279452 NAA16Q6N069 864 aaPredicted RBP7.96□□□□□ -1.14
CD44-204ENST00000279452 MTMR14Q8NCE2 650 aa7.96□□□□□ -1.14
CD44-204ENST00000279452 GCC1Q96CN9 775 aa7.96□□□□□ -1.14
CD44-204ENST00000279452 ZDHHC15Q96MV8 337 aa7.96□□□□□ -1.14
CD44-204ENST00000279452 BOLA2Q9H3K6 86 aa7.96□□□□□ -1.14
CD44-204ENST00000279452 CREBZFQ9NS37 354 aa7.96□□□□□ -1.14
CD44-204ENST00000279452 ZNF70Q9UC06 446 aaPredicted RBP7.96□□□□□ -1.14
CD44-204ENST00000279452 MKRN1Q9UHC7 482 aaKnown RBP7.96□□□□□ -1.14
CD44-204ENST00000279452 PGAP2Q9UHJ9 254 aa7.96□□□□□ -1.14
CD44-204ENST00000279452 DAGLAQ9Y4D2 1042 aa7.96□□□□□ -1.14
CD44-204ENST00000279452 AOX1Q06278 1338 aa7.96□□□□□ -1.14
CD44-204ENST00000279452 CYP2E1P05181 493 aaPredicted RBP7.95□□□□□ -1.14
CD44-204ENST00000279452 LDHCP07864 332 aa7.95□□□□□ -1.14
CD44-204ENST00000279452 BTDP43251 543 aa7.95□□□□□ -1.14
CD44-204ENST00000279452 MAP3K12Q12852 859 aa7.95□□□□□ -1.14
CD44-204ENST00000279452 PICALMQ13492 652 aa7.95□□□□□ -1.14
CD44-204ENST00000279452 HDAC1Q13547 482 aaPredicted RBP7.95□□□□□ -1.14
CD44-204ENST00000279452 RASA3Q14644 834 aa7.95□□□□□ -1.14
CD44-204ENST00000279452 SPDYE2Q495Y8 402 aa7.95□□□□□ -1.14
CD44-204ENST00000279452 TSHZ3Q63HK5 1081 aa7.95□□□□□ -1.14
CD44-204ENST00000279452 HHIPL2Q6UWX4 724 aa7.95□□□□□ -1.14
CD44-204ENST00000279452 C2orf69Q8N8R5 385 aa7.95□□□□□ -1.14
CD44-204ENST00000279452 ZBED3Q96IU2 234 aaPredicted RBP7.95□□□□□ -1.14
CD44-204ENST00000279452 ZNF512BQ96KM6 892 aaPredicted RBP7.95□□□□□ -1.14
CD44-204ENST00000279452 DEFB129Q9H1M3 183 aa7.95□□□□□ -1.14
CD44-204ENST00000279452 GBA2Q9HCG7 927 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms