RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 CTDSPL2Q05D32 466 aa15.69■□□□□ 0.1
NPC1-201ENST00000269228 GNA11P29992 359 aa15.69■□□□□ 0.1
NPC1-201ENST00000269228 TCP10Q12799 353 aa15.69■□□□□ 0.1
NPC1-201ENST00000269228 ABCA9Q8IUA7 1624 aa15.69■□□□□ 0.1
NPC1-201ENST00000269228 KRT27Q7Z3Y8 459 aa15.68■□□□□ 0.1
NPC1-201ENST00000269228 TMEM87BQ96K49 555 aa15.68■□□□□ 0.1
NPC1-201ENST00000269228 GREM2Q9H772 168 aa15.68■□□□□ 0.1
NPC1-201ENST00000269228 DACT1Q9NYF0 836 aa15.68■□□□□ 0.1
NPC1-201ENST00000269228 ESPNB1AK53 854 aa15.68■□□□□ 0.1
NPC1-201ENST00000269228 TRIM21P19474 475 aaKnown RBP15.68■□□□□ 0.1
NPC1-201ENST00000269228 RBM28Q9NW13 759 aaKnown RBP15.68■□□□□ 0.1
NPC1-201ENST00000269228 CDC42BPBQ9Y5S2 1711 aa15.68■□□□□ 0.1
NPC1-201ENST00000269228 ZNF771Q7L3S4 317 aaPredicted RBP15.68■□□□□ 0.1
NPC1-201ENST00000269228 TDRD12Q587J7 1177 aaKnown RBP15.68■□□□□ 0.1
NPC1-201ENST00000269228 RRAGBQ5VZM2 374 aa15.68■□□□□ 0.1
NPC1-201ENST00000269228 NIM1KQ8IY84 436 aa15.68■□□□□ 0.1
NPC1-201ENST00000269228 KRI1Q8N9T8 703 aaKnown RBP15.68■□□□□ 0.1
NPC1-201ENST00000269228 TAF4BQ92750 862 aa15.68■□□□□ 0.1
NPC1-201ENST00000269228 MCM7P33993 719 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 MFSD14BQ5SR56 506 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 NLGN1Q8N2Q7 840 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 TBC1D22AQ8WUA7 517 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 PIGBQ92521 554 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 TRIM47Q96LD4 638 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 BCS1LQ9Y276 419 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 DESP17661 470 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 VPS36Q86VN1 386 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 C2CD5Q86YS7 1000 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 TGFBRAP1Q8WUH2 860 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 INTS4Q96HW7 963 aaKnown RBP15.67■□□□□ 0.1
NPC1-201ENST00000269228 ANGEL1Q9UNK9 670 aaKnown RBP15.67■□□□□ 0.1
NPC1-201ENST00000269228 CDK12Q9NYV4 1490 aaPredicted RBP15.67■□□□□ 0.1
NPC1-201ENST00000269228 ALKQ9UM73 1620 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 BCAMP50895 628 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 CETN1Q12798 172 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 DHX58Q96C10 678 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 SH2D4AQ9H788 454 aa15.67■□□□□ 0.1
NPC1-201ENST00000269228 NCOA5Q9HCD5 579 aaKnown RBP15.67■□□□□ 0.1
NPC1-201ENST00000269228 ZYXQ15942 572 aaKnown RBP15.66■□□□□ 0.1
NPC1-201ENST00000269228 TMC6Q7Z403 805 aa15.66■□□□□ 0.1
NPC1-201ENST00000269228 SEPT12Q8IYM1 358 aa15.66■□□□□ 0.1
NPC1-201ENST00000269228 RMND1Q9NWS8 449 aa15.66■□□□□ 0.1
NPC1-201ENST00000269228 SYT1P21579 422 aa15.66■□□□□ 0.1
NPC1-201ENST00000269228 ZSCAN23Q3MJ62 389 aa15.66■□□□□ 0.1
NPC1-201ENST00000269228 AXIN2Q9Y2T1 843 aa15.66■□□□□ 0.1
NPC1-201ENST00000269228 UNC13BO14795 1591 aa15.66■□□□□ 0.1
NPC1-201ENST00000269228 ERLIN2O94905 339 aa15.66■□□□□ 0.1
NPC1-201ENST00000269228 USP8P40818 1118 aa15.66■□□□□ 0.1
NPC1-201ENST00000269228 CHRNDQ07001 517 aa15.66■□□□□ 0.1
NPC1-201ENST00000269228 BICD1Q96G01 975 aa15.66■□□□□ 0.1
NPC1-201ENST00000269228 ZNF408Q9H9D4 720 aa15.66■□□□□ 0.1
NPC1-201ENST00000269228 ASIC1P78348 528 aa15.65■□□□□ 0.1
NPC1-201ENST00000269228 CCDC150Q8NCX0 1101 aa15.65■□□□□ 0.1
NPC1-201ENST00000269228 PUS3Q9BZE2 481 aaKnown RBP15.65■□□□□ 0.1
NPC1-201ENST00000269228 FBXO3Q9UK99 471 aa15.65■□□□□ 0.1
NPC1-201ENST00000269228 TTF2Q9UNY4 1162 aaKnown RBP15.65■□□□□ 0.1
NPC1-201ENST00000269228 KRT79Q5XKE5 535 aa15.65■□□□□ 0.1
NPC1-201ENST00000269228 YEATS4O95619 227 aa15.65■□□□□ 0.1
NPC1-201ENST00000269228 PRKG1Q13976 671 aa15.65■□□□□ 0.1
NPC1-201ENST00000269228 HSP90AA4PQ58FG1 418 aa15.65■□□□□ 0.1
NPC1-201ENST00000269228 CERS3Q8IU89 383 aa15.65■□□□□ 0.1
NPC1-201ENST00000269228 PICK1Q9NRD5 415 aa15.65■□□□□ 0.1
NPC1-201ENST00000269228 RNF123Q5XPI4 1314 aa15.65■□□□□ 0.1
NPC1-201ENST00000269228 FAM114A1Q8IWE2 563 aa15.65■□□□□ 0.1
NPC1-201ENST00000269228 TRMT2AQ8IZ69 625 aaKnown RBP15.65■□□□□ 0.1
NPC1-201ENST00000269228 MYL10Q9BUA6 226 aa15.65■□□□□ 0.1
NPC1-201ENST00000269228 V9GY48 417 aaPredicted RBP15.65■□□□□ 0.1
NPC1-201ENST00000269228 SPHKAPQ2M3C7 1700 aa15.65■□□□□ 0.1
NPC1-201ENST00000269228 DLGAP5Q15398 846 aa15.64■□□□□ 0.1
NPC1-201ENST00000269228 BRAPQ7Z569 592 aa15.64■□□□□ 0.1
NPC1-201ENST00000269228 ZSCAN12O43309 604 aa15.64■□□□□ 0.09
NPC1-201ENST00000269228 ARHGEF10LQ9HCE6 1279 aa15.64■□□□□ 0.09
NPC1-201ENST00000269228 CYP27B1O15528 508 aa15.64■□□□□ 0.09
NPC1-201ENST00000269228 ZNF853P0CG23 659 aa15.64■□□□□ 0.09
NPC1-201ENST00000269228 ZSCAN30Q86W11 494 aa15.64■□□□□ 0.09
NPC1-201ENST00000269228 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.64■□□□□ 0.09
NPC1-201ENST00000269228 N4BP3O15049 544 aa15.64■□□□□ 0.09
NPC1-201ENST00000269228 ADCY5O95622 1261 aa15.64■□□□□ 0.09
NPC1-201ENST00000269228 DOK7Q18PE1 504 aa15.64■□□□□ 0.09
NPC1-201ENST00000269228 MMRN2Q9H8L6 949 aa15.64■□□□□ 0.09
NPC1-201ENST00000269228 GLI2P10070 1586 aa15.63■□□□□ 0.09
NPC1-201ENST00000269228 CAVIN2O95810 425 aa15.63■□□□□ 0.09
NPC1-201ENST00000269228 ATP2B4P23634 1241 aa15.63■□□□□ 0.09
NPC1-201ENST00000269228 DNAI2Q9GZS0 605 aa15.63■□□□□ 0.09
NPC1-201ENST00000269228 HEG1Q9ULI3 1381 aa15.63■□□□□ 0.09
NPC1-201ENST00000269228 COPRSQ9NQ92 184 aa15.63■□□□□ 0.09
NPC1-201ENST00000269228 IBTKQ9P2D0 1353 aaPredicted RBP15.63■□□□□ 0.09
NPC1-201ENST00000269228 B4DLN1 442 aa15.63■□□□□ 0.09
NPC1-201ENST00000269228 DTNBO60941 627 aa15.63■□□□□ 0.09
NPC1-201ENST00000269228 MRPL12P52815 198 aaKnown RBP15.63■□□□□ 0.09
NPC1-201ENST00000269228 USP40Q9NVE5 1235 aa15.63■□□□□ 0.09
NPC1-201ENST00000269228 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.63■□□□□ 0.09
NPC1-201ENST00000269228 SP4Q02446 784 aa15.63■□□□□ 0.09
NPC1-201ENST00000269228 PTPN14Q15678 1187 aa15.63■□□□□ 0.09
NPC1-201ENST00000269228 LETM2Q2VYF4 491 aa15.63■□□□□ 0.09
NPC1-201ENST00000269228 ANO6Q4KMQ2 910 aa15.62■□□□□ 0.09
NPC1-201ENST00000269228 FCHSD1Q86WN1 690 aa15.62■□□□□ 0.09
NPC1-201ENST00000269228 PLIN2Q99541 437 aa15.62■□□□□ 0.09
NPC1-201ENST00000269228 ADGRB3O60242 1522 aa15.62■□□□□ 0.09
NPC1-201ENST00000269228 CDC42BPGQ6DT37 1551 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms