RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 PCK1P35558 622 aa18.91■□□□□ 0.62
TSPAN3-201ENST00000267970 SETDB1Q15047 1291 aa18.91■□□□□ 0.62
TSPAN3-201ENST00000267970 SARNPP82979 210 aaKnown RBP18.91■□□□□ 0.62
TSPAN3-201ENST00000267970 RAD51AP2Q09MP3 1159 aa18.91■□□□□ 0.62
TSPAN3-201ENST00000267970 MCM9Q9NXL9 1143 aa18.91■□□□□ 0.62
TSPAN3-201ENST00000267970 LUC7L2Q9Y383 392 aaKnown RBP18.91■□□□□ 0.62
TSPAN3-201ENST00000267970 NDUFB9Q9Y6M9 179 aa18.91■□□□□ 0.62
TSPAN3-201ENST00000267970 ATP2A1O14983 1001 aa18.91■□□□□ 0.62
TSPAN3-201ENST00000267970 BUB1BO60566 1050 aaPredicted RBP18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 LETM2Q2VYF4 491 aa18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 KLHL7Q8IXQ5 586 aa18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 STMN2Q93045 179 aa18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 NGLY1Q96IV0 654 aa18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 EPSTI1Q96J88 318 aa18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 STMN4Q9H169 189 aaPredicted RBP18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 PFDN4Q9NQP4 134 aa18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 AKR1B15C9JRZ8 316 aaPredicted RBP18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 WASLO00401 505 aaPredicted RBP18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 MRPL50Q8N5N7 158 aaKnown RBP18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 MAK16Q9BXY0 300 aaKnown RBP18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 AGTPBP1Q9UPW5 1226 aa18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 EHBP1L1Q8N3D4 1523 aa18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 KIF3CO14782 793 aa18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 LDHCP07864 332 aa18.9■□□□□ 0.62
TSPAN3-201ENST00000267970 CCDC152Q4G0S7 254 aa18.89■□□□□ 0.62
TSPAN3-201ENST00000267970 RUFY3Q7L099 469 aa18.89■□□□□ 0.62
TSPAN3-201ENST00000267970 LMBR1Q8WVP7 490 aa18.89■□□□□ 0.61
TSPAN3-201ENST00000267970 ARHGEF2Q92974 986 aaKnown RBP18.89■□□□□ 0.61
TSPAN3-201ENST00000267970 NOC4LQ9BVI4 516 aaKnown RBP18.89■□□□□ 0.61
TSPAN3-201ENST00000267970 PLEKHH2Q8IVE3 1493 aa18.89■□□□□ 0.61
TSPAN3-201ENST00000267970 KRT79Q5XKE5 535 aa18.89■□□□□ 0.61
TSPAN3-201ENST00000267970 KRT28Q7Z3Y7 464 aa18.89■□□□□ 0.61
TSPAN3-201ENST00000267970 OTUD7AQ8TE49 926 aaPredicted RBP18.89■□□□□ 0.61
TSPAN3-201ENST00000267970 IMPG2Q9BZV3 1241 aa18.89■□□□□ 0.61
TSPAN3-201ENST00000267970 FAM184BQ9ULE4 1060 aa18.89■□□□□ 0.61
TSPAN3-201ENST00000267970 GKAP1Q5VSY0 366 aaPredicted RBP18.89■□□□□ 0.61
TSPAN3-201ENST00000267970 TTC14Q96N46 770 aa18.89■□□□□ 0.61
TSPAN3-201ENST00000267970 TACO1Q9BSH4 297 aaKnown RBP18.89■□□□□ 0.61
TSPAN3-201ENST00000267970 GADD45BO75293 160 aaPredicted RBP18.89■□□□□ 0.61
TSPAN3-201ENST00000267970 HDAC1Q13547 482 aaPredicted RBP18.89■□□□□ 0.61
TSPAN3-201ENST00000267970 IGSF22Q8N9C0 903 aa18.89■□□□□ 0.61
TSPAN3-201ENST00000267970 STIM2Q9P246 746 aa18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 TXNDC9O14530 226 aa18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 CCDC170Q8IYT3 715 aa18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 STAMQ92783 540 aa18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 LRRC59Q96AG4 307 aaKnown RBP18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 CAVIN2O95810 425 aa18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 SNRPA1P09661 255 aaKnown RBP18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 LACTBP83111 547 aaPredicted RBP18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 IFNL2Q8IZJ0 200 aa18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 FNBP4Q8N3X1 1017 aaPredicted RBP18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 GPCPD1Q9NPB8 672 aa18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 GRM8O00222 908 aa18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 TRAF5O00463 557 aa18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 DTHD1Q6ZMT9 781 aa18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 LRRC43Q8N309 656 aa18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 RRP36Q96EU6 259 aaKnown RBP18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 USTQ9Y2C2 406 aa18.88■□□□□ 0.61
TSPAN3-201ENST00000267970 SPDYE3A6NKU9 549 aa18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 NDUFAB1O14561 156 aa18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 ZFYP08048 801 aaPredicted RBP18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 ATP6V1AP38606 617 aa18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 GBP7Q8N8V2 638 aaPredicted RBP18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 STK38LQ9Y2H1 464 aa18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 hCG_1642624A0A1W2PR95 340 aa18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 UQCRFS1P1P0C7P4 283 aa18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 DDX39AO00148 427 aaKnown RBP18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 SPAG1Q07617 926 aa18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 ATP11AP98196 1134 aa18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 SEL1L2Q5TEA6 688 aa18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 MYL10Q9BUA6 226 aa18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 MTRF1LQ9UGC7 380 aaKnown RBP18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 CAMSAP2Q08AD1 1489 aa18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 SPOPO43791 374 aa18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 C6orf50Q9HD87 102 aa18.87■□□□□ 0.61
TSPAN3-201ENST00000267970 A0A1B0GUL7 405 aa18.86■□□□□ 0.61
TSPAN3-201ENST00000267970 CALCOCO2Q13137 446 aa18.86■□□□□ 0.61
TSPAN3-201ENST00000267970 CRCPO75575 148 aa18.86■□□□□ 0.61
TSPAN3-201ENST00000267970 PNMA8AQ86V59 439 aaPredicted RBP18.86■□□□□ 0.61
TSPAN3-201ENST00000267970 B4E1Z4 1266 aa18.86■□□□□ 0.61
TSPAN3-201ENST00000267970 CIB2O75838 187 aa18.86■□□□□ 0.61
TSPAN3-201ENST00000267970 ATP8B2P98198 1209 aa18.86■□□□□ 0.61
TSPAN3-201ENST00000267970 CNNM2Q9H8M5 875 aa18.86■□□□□ 0.61
TSPAN3-201ENST00000267970 SUPT6HQ7KZ85 1726 aaKnown RBP18.86■□□□□ 0.61
TSPAN3-201ENST00000267970 ANKRD44Q8N8A2 993 aa18.85■□□□□ 0.61
TSPAN3-201ENST00000267970 KLHDC4Q8TBB5 520 aa18.85■□□□□ 0.61
TSPAN3-201ENST00000267970 NIP7Q9Y221 180 aaKnown RBP eCLIP18.85■□□□□ 0.61
TSPAN3-201ENST00000267970 ARHGEF11O15085 1522 aa18.85■□□□□ 0.61
TSPAN3-201ENST00000267970 TNNC1P63316 161 aa18.85■□□□□ 0.61
TSPAN3-201ENST00000267970 PRPHP41219 470 aa18.85■□□□□ 0.61
TSPAN3-201ENST00000267970 PIK3AP1Q6ZUJ8 805 aa18.85■□□□□ 0.61
TSPAN3-201ENST00000267970 BIRC3Q13489 604 aa18.85■□□□□ 0.61
TSPAN3-201ENST00000267970 NKIRAS1Q9NYS0 192 aa18.85■□□□□ 0.61
TSPAN3-201ENST00000267970 ACEP12821 1306 aa18.85■□□□□ 0.61
TSPAN3-201ENST00000267970 CCNT1O60563 726 aaKnown RBP18.85■□□□□ 0.61
TSPAN3-201ENST00000267970 WDHD1O75717 1129 aaPredicted RBP18.85■□□□□ 0.61
TSPAN3-201ENST00000267970 FRMD3A2A2Y4 597 aa18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 GOLGA6CA6NDK9 693 aa18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 POLR2DO15514 142 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms